Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15656 Utricularia gibba HOM05D007561 ORTHO05D007661 4.1e-230 801.2 455 100.0
Migut.J01597 Erythranthe guttata HOM05D007561 ORTHO05D007661 1.8e-47 194.5 505 34.3
SalBow6G6384 Salvia bowleyana HOM05D007561 ORTHO05D007661 1.9e-46 191.0 456 36.6
SalBow6G1989 Salvia bowleyana HOM05D007561 ORTHO05D007661 9.7e-46 188.7 456 36.4
MSTRG.6258 Avicennia marina HOM05D007561 ORTHO05D007661 1.8e-39 167.9 486 33.3
MSTRG.19744 Avicennia marina HOM05D007561 ORTHO05D007661 5.1e-39 166.4 278 42.1
Oeu020265.1 Olea europaea HOM05D007561 ORTHO05D007661 1.7e-37 161.4 504 32.7
Peaxi162Scf00575g00079 Petunia axillaris HOM05D007561 ORTHO05D007661 6.9e-36 156.0 356 36.2
Nitab4.5_0000613g0170 Nicotiana tabacum HOM05D007561 ORTHO05D007661 1.0e-31 142.1 292 39.0
Nitab4.5_0000811g0050 Nicotiana tabacum HOM05D007561 ORTHO05D007661 5.1e-31 139.8 352 36.6
CAN.G128.129 Capsicum annuum HOM05D007561 ORTHO05D007661 2.0e-30 137.9 510 31.2
DCAR_009109 Daucus carota HOM05D007561 ORTHO05D007661 1.3e-29 135.2 460 30.2
Potri.005G090000 Populus trichocarpa HOM05D007561 ORTHO05D007661 6.3e-29 132.9 432 31.2
Sabra05G0074100 Salix brachista HOM05D007561 ORTHO05D007661 1.4e-28 131.7 262 39.7
PGSC0003DMG400028120 Solanum tuberosum HOM05D007561 ORTHO05D007661 2.4e-28 131.0 298 40.9
SGA_v2.0_scaffold69G23211 Striga asiatica HOM05D007561 ORTHO05D007661 1.5e-27 128.3 360 33.9
Solyc10g081340.1 Solanum lycopersicum HOM05D007561 ORTHO05D007661 2.6e-27 127.5 266 41.0
Sopen10g031840 Solanum pennellii HOM05D007561 ORTHO05D007661 2.6e-27 127.5 266 41.0
Ciclev10013885m.g Citrus clementina HOM05D007561 ORTHO05D007661 3.8e-26 123.6 410 29.5
TWI77G0394 Tripterygium wilfordii HOM05D007561 ORTHO05D007661 3.8e-26 123.6 471 28.9
SGA_v2.0_scaffold66G22349 Striga asiatica HOM05D007561 ORTHO05D007661 1.4e-25 121.7 276 38.8
Ah.04g149900 Amaranthus hybridus HOM05D007561 ORTHO05D007661 1.9e-25 121.3 370 31.4
AUR62020949 Chenopodium quinoa HOM05D007561 ORTHO05D007661 1.9e-25 121.3 386 30.3
TWI74G0078 Tripterygium wilfordii HOM05D007561 ORTHO05D007661 2.7e-24 117.5 466 28.8
TAR561G0001 Trochodendron aralioides HOM05D007561 ORTHO05D007661 1.0e-23 115.5 468 28.0
Potri.007G074056 Populus trichocarpa HOM05D007561 ORTHO05D007661 1.8e-23 114.8 246 38.6
AUR62018475 Chenopodium quinoa HOM05D007561 ORTHO05D007661 3.9e-23 113.6 392 30.1
Manes.04G066400 Manihot esculenta HOM05D007561 ORTHO05D007661 3.9e-23 113.6 450 30.4
PSO732G0159 Papaver somniferum HOM05D007561 ORTHO05D007661 3.9e-23 113.6 255 38.0
PSO675G2416 Papaver somniferum HOM05D007561 ORTHO05D007661 5.2e-23 113.2 236 39.0
Actinidia18379 Actinidia chinensis HOM05D007561 ORTHO05D007661 2.0e-22 111.3 304 34.2
Lj2A414T29 Lonicera japonica HOM05D007561 ORTHO05D007661 4.4e-22 110.2 502 28.5
Migut.K00204 Erythranthe guttata HOM05D007561 ORTHO05D007661 1.3e-21 108.6 238 37.8
VMungo1383G3023 Vigna mungo HOM05D007561 ORTHO05D007661 3.7e-21 107.1 400 27.8
Dinv37052 Davidia involucrata HOM05D007561 ORTHO05D007661 8.2e-21 105.9 379 31.1
Psat3g083040 Pisum sativum HOM05D007561 ORTHO05D007661 1.8e-20 104.8 356 29.8
PGR042G3351 Punica granatum HOM05D007561 ORTHO05D007661 1.8e-20 104.8 464 27.8
Medtr7g088200 Medicago truncatula HOM05D007561 ORTHO05D007661 3.1e-20 104.0 371 31.0
Phvul.001G109100 Phaseolus vulgaris HOM05D007561 ORTHO05D007661 4.1e-20 103.6 353 28.9
Ca_08339_v3 Cicer arietinum L. HOM05D007561 ORTHO05D007661 2.0e-19 101.3 363 30.3
MELO3C009692.2 Cucumis melo HOM05D007561 ORTHO05D007661 2.6e-19 100.9 412 28.4
CsaV3_3G039500 Cucumis sativus L. HOM05D007561 ORTHO05D007661 4.5e-19 100.1 421 28.3
RhsimUnG0021900 Rhododendron simsii HOM05D007561 ORTHO05D007661 7.7e-19 99.4 206 36.9
Aqoxy2G00670 Aquilegia oxysepala HOM05D007561 ORTHO05D007661 2.9e-18 97.4 240 37.5
Sc13g0000670 Simmondsia chinensis HOM05D007561 ORTHO05D007661 3.8e-18 97.1 250 36.0
Haze_20355 Corylus avellana HOM05D007561 ORTHO05D007661 6.5e-18 96.3 326 28.5
Glyma.19G123300 Glycine max HOM05D007561 ORTHO05D007661 6.5e-18 96.3 401 27.2
CiPaw.09G161100 Carya illinoinensis HOM05D007561 ORTHO05D007661 8.5e-18 95.9 279 34.4
Gorai.012G026500 Gossypium raimondii HOM05D007561 ORTHO05D007661 1.1e-17 95.5 449 27.6
Thecc.05G190500 Theobroma cacao HOM05D007561 ORTHO05D007661 1.1e-17 95.5 486 27.4
ATR0068G026 Amborella trichopoda HOM05D007561 ORTHO05D007661 2.5e-17 94.4 252 36.5
Lalb_Chr22g0358291 Lupinus albus HOM05D007561 ORTHO05D007661 2.5e-17 94.4 354 29.4
GSVIVG01029894001 Vitis vinifera HOM05D007561 ORTHO05D007661 3.2e-17 94.0 342 28.9
ClCG10G016860 Citrullus lanatus HOM05D007561 ORTHO05D007661 5.5e-17 93.2 272 32.4
Glyma.03G118900 Glycine max HOM05D007561 ORTHO05D007661 9.4e-17 92.4 418 26.1
HPP92_021156 Vanilla planifolia HOM05D007561 ORTHO05D007661 1.2e-16 92.0 353 31.2
Lj1g0025432 Lotus japonicus HOM05D007561 ORTHO05D007661 3.6e-16 90.5 360 28.6
Gohir.A13G114700 Gossypium hirsutum HOM05D007561 ORTHO05D007661 6.1e-16 89.7 460 27.2
Sed0023829 Sechium edule HOM05D007561 ORTHO05D007661 6.1e-16 89.7 271 33.2
Cfa019892 Carpinus fangiana HOM05D007561 ORTHO05D007661 8.0e-16 89.4 334 28.1
RcHm_v2.0_Chr3g0495011 Rosa chinensis HOM05D007561 ORTHO05D007661 1.4e-15 88.6 263 33.5
Sabra07G0062300 Salix brachista HOM05D007561 ORTHO05D007661 1.4e-15 88.6 162 41.4
Sed0024594 Sechium edule HOM05D007561 ORTHO05D007661 1.4e-15 88.6 397 27.7
THA.LOC104816415 Tarenaya hassleriana HOM05D011214 ORTHO05D007661 1.4e-15 88.6 322 29.8
Gorai.013G132100 Gossypium raimondii HOM05D007561 ORTHO05D007661 5.2e-15 86.7 453 26.5
FAN07G2764 Fragaria x ananassa HOM05D007561 ORTHO05D007661 6.8e-15 86.3 192 40.1
FAN17G1891 Fragaria x ananassa HOM05D007561 ORTHO05D007661 6.8e-15 86.3 267 34.8
Gohir.D04G022850 Gossypium hirsutum HOM05D007561 ORTHO05D007661 1.5e-14 85.1 207 35.3
Gohir.A05G393000 Gossypium hirsutum HOM05D007561 ORTHO05D007661 2.0e-14 84.7 211 35.1
Cpa.g.sc33.185 Carica papaya HOM05D007561 ORTHO05D007661 2.6e-14 84.3 467 25.9
Gohir.D13G117500 Gossypium hirsutum HOM05D007561 ORTHO05D007661 2.6e-14 84.3 454 26.4
PGR042G3883 Punica granatum HOM05D007561 ORTHO05D007661 3.4e-14 84.0 233 34.8
FAN12G2197 Fragaria x ananassa HOM05D007561 ORTHO05D007661 5.7e-14 83.2 284 31.7
FAN22G1656 Fragaria x ananassa HOM05D007561 ORTHO05D007661 5.7e-14 83.2 192 39.6
Hma1.2p1_1686F.1_g297500 Hydrangea macrophylla HOM05D007561 ORTHO05D007661 7.5e-14 82.8 424 27.6
Duzib177G0099 Durio zibethinus HOM05D007561 ORTHO05D007661 9.7e-14 82.4 451 26.4
Atru.chr8.931 Acer truncatum HOM05D007561 ORTHO05D007661 3.7e-13 80.5 289 31.5
FvH4_4g10470 Fragaria vesca HOM05D007561 ORTHO05D007661 3.7e-13 80.5 275 31.3
FAN12G0994 Fragaria x ananassa HOM05D007561 ORTHO05D007661 4.8e-13 80.1 247 32.4
PSO339G6289 Papaver somniferum HOM05D007561 ORTHO05D007661 2.4e-12 77.8 154 40.9
CANSAT78G1013 Cannabis sativa HOM05D007561 ORTHO05D007661 9.1e-12 75.9 241 31.1
PSO384G3070 Papaver somniferum HOM05D007561 ORTHO05D007661 9.1e-12 75.9 247 32.8
BcaB05g21770 Brassica carinata HOM05D011214 ORTHO05D007661 5.9e-11 73.2 292 30.5
CSS0046015 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 1.0e-10 72.4 321 26.8
Eucgr.A02170 Eucalyptus grandis HOM05D007561 ORTHO05D007661 2.9e-10 70.9 257 27.2
Zm00001eb333260 Zea mays HOM05D007561 ORTHO05D007661 2.9e-10 70.9 226 32.7
MD12G1110900 Malus domestica HOM05D007561 ORTHO05D007661 3.8e-10 70.5 189 33.3
CSS0017824 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 5.0e-10 70.1 321 26.5
AT5G04190 Arabidopsis thaliana HOM05D011214 ORTHO05D007661 8.5e-10 69.3 381 26.5
BcaC03g12952 Brassica carinata HOM05D011214 ORTHO05D007661 1.5e-09 68.6 360 27.2
C02p01830 Brassica napus HOM05D011214 ORTHO05D007661 1.5e-09 68.6 360 27.2
Prupe.7G023100 Prunus persica HOM05D007561 ORTHO05D007661 1.9e-09 68.2 271 30.3
TAR629G0269 Trochodendron aralioides HOM05D002654 ORTHO05D002430 3.2e-09 67.4 335 27.5
BolC2t06140H Brassica oleracea HOM05D011214 ORTHO05D007661 5.5e-09 66.6 360 27.2
ECA234G4854 Erigeron canadensis HOM05D000087 ORTHO05D000439 5.5e-09 66.6 319 28.8
Sabra15G0087900 Salix brachista HOM05D002654 ORTHO05D002430 9.4e-09 65.9 337 27.6
Cc11_g13080 Coffea canephora HOM05D002654 ORTHO05D002430 1.2e-08 65.5 309 26.9
C08p16570 Brassica napus HOM05D002654 ORTHO05D002430 1.6e-08 65.1 302 26.5
BolC8t49285H Brassica oleracea HOM05D002654 ORTHO05D002430 1.6e-08 65.1 302 26.5
Manes.06G093600 Manihot esculenta HOM05D002654 ORTHO05D002430 2.1e-08 64.7 328 27.7
TAR371G1053 Trochodendron aralioides HOM05D002654 ORTHO05D002430 2.1e-08 64.7 358 27.4
BcaC07g38730 Brassica carinata HOM05D002654 ORTHO05D002430 4.7e-08 63.5 303 26.4
AL6G13810 Arabidopsis lyrata HOM05D011214 ORTHO05D007661 1.8e-07 61.6 381 26.5
AL5G12550 Arabidopsis lyrata HOM05D002654 ORTHO05D002430 4.0e-07 60.5 306 26.8
MBI05_g08278_MAGBIO Magnolia biondii HOM05D002654 ORTHO05D002430 5.2e-07 60.1 334 25.7
BraA02t04803Z Brassica rapa HOM05D011214 ORTHO05D007661 6.8e-07 59.7 366 26.2
CiPaw.12G013900 Carya illinoinensis HOM05D002654 ORTHO05D002430 6.8e-07 59.7 274 25.9
Carub.0006s0314 Capsella rubella HOM05D011214 ORTHO05D007661 1.2e-06 58.9 310 27.1
C05p12030 Brassica napus HOM05D002654 ORTHO05D002430 1.5e-06 58.5 294 27.2
Sp1g12630 Schrenkiella parvula HOM05D002654 ORTHO05D002430 1.5e-06 58.5 309 26.5
Sp2g13980 Schrenkiella parvula HOM05D002654 ORTHO05D002430 1.5e-06 58.5 302 25.8
A06p10250 Brassica napus HOM05D002654 ORTHO05D002430 2.0e-06 58.2 292 28.8
BraA06t24208Z Brassica rapa HOM05D002654 ORTHO05D002430 2.0e-06 58.2 292 28.8
Hma1.2p1_0795F.1_g218740 Hydrangea macrophylla HOM05D002654 ORTHO05D002430 2.0e-06 58.2 322 26.1
COL.COLO4_05647 Corchorus olitorius HOM05D007561 ORTHO05D007661 3.4e-06 57.4 275 26.9
Phvul.004G052600 Phaseolus vulgaris HOM05D025134 ORTHO05D020753 3.4e-06 57.4 208 29.8
BolC5t29958H Brassica oleracea HOM05D002654 ORTHO05D002430 4.4e-06 57.0 294 28.2
Cc04_g16770 Coffea canephora HOM05D000087 ORTHO05D000439 4.4e-06 57.0 321 25.9
DCAR_024160 Daucus carota HOM05D002654 ORTHO05D002430 4.4e-06 57.0 329 26.4
Dinv38698 Davidia involucrata HOM05D002654 ORTHO05D002430 4.4e-06 57.0 307 26.4
AT2G02950 Arabidopsis thaliana HOM05D002654 ORTHO05D002430 5.7e-06 56.6 300 27.3
Peaxi162Scf00823g00217 Petunia axillaris HOM05D002654 ORTHO05D002430 5.7e-06 56.6 264 29.2
CiPaw.05G136200 Carya illinoinensis HOM05D002654 ORTHO05D002430 7.5e-06 56.2 330 26.4
Glyma.05G080200 Glycine max HOM05D025134 ORTHO05D020753 7.5e-06 56.2 91 41.8
Glyma.19G067550 Glycine max HOM05D025134 ORTHO05D020753 7.5e-06 56.2 53 58.5
BcaNung06706 Brassica carinata HOM05D002654 ORTHO05D002430 9.8e-06 55.8 175 34.3
Cfa008990 Carpinus fangiana HOM05D002654 ORTHO05D002430 9.8e-06 55.8 319 26.0
Nn3g17221 Nelumbo nucifera HOM05D002654 ORTHO05D002430 9.8e-06 55.8 349 25.5
Peaxi162Scf00036g00182 Petunia axillaris HOM05D002654 ORTHO05D002430 9.8e-06 55.8 277 27.4


User provided reference genes

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