Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15640 Utricularia gibba HOM05D006587 ORTHO05D008487 1.1e-217 759.6 378 100.0
MSTRG.24750 Avicennia marina HOM05D006587 ORTHO05D008487 9.0e-98 361.3 315 60.6
SalBow5G0644 Salvia bowleyana HOM05D006587 ORTHO05D008487 9.0e-98 361.3 331 60.1
Migut.N00169 Erythranthe guttata HOM05D006587 ORTHO05D008487 2.6e-97 359.8 308 61.0
Potri.008G149800 Populus trichocarpa HOM05D006587 ORTHO05D008487 8.2e-91 338.2 318 59.7
CANSAT78G1956 Cannabis sativa HOM05D006587 ORTHO05D008487 1.1e-90 337.8 311 60.8
TAR362G0294 Trochodendron aralioides HOM05D006587 ORTHO05D008487 9.1e-90 334.7 308 60.4
Manes.03G181700 Manihot esculenta HOM05D006587 ORTHO05D008487 1.2e-89 334.3 305 61.6
Ciclev10005176m.g Citrus clementina HOM05D006587 ORTHO05D008487 1.3e-88 330.9 308 57.5
GSVIVG01017920001 Vitis vinifera HOM05D006587 ORTHO05D008487 1.3e-88 330.9 325 56.6
SalBow5G2730 Salvia bowleyana HOM05D006587 ORTHO05D008487 2.2e-88 330.1 311 58.8
Eucgr.H03560 Eucalyptus grandis HOM05D006587 ORTHO05D008487 8.5e-88 328.2 301 60.1
Hma1.2p1_0511F.1_g168960 Hydrangea macrophylla HOM05D006587 ORTHO05D008487 3.2e-87 326.2 308 57.8
CiPaw.02G094600 Carya illinoinensis HOM05D006587 ORTHO05D008487 4.2e-87 325.9 322 55.3
Nitab4.5_0000144g0120 Nicotiana tabacum HOM05D006587 ORTHO05D008487 4.2e-87 325.9 310 56.8
Cfa015608 Carpinus fangiana HOM05D006587 ORTHO05D006035 5.5e-87 325.5 324 58.0
ECA236G2554 Erigeron canadensis HOM05D006587 ORTHO05D008487 7.2e-87 325.1 305 58.0
Sc19g0004360 Simmondsia chinensis HOM05D006587 ORTHO05D008487 1.2e-86 324.3 315 57.1
Prupe.1G154500 Prunus persica HOM05D006587 ORTHO05D008487 1.6e-86 323.9 342 55.0
PGR004G2885 Punica granatum HOM05D006587 ORTHO05D008487 2.1e-86 323.6 309 58.3
THA.LOC104818820 Tarenaya hassleriana HOM05D006587 ORTHO05D008487 2.1e-86 323.6 309 57.9
Cc03_g03390 Coffea canephora HOM05D006587 ORTHO05D008487 6.1e-86 322.0 305 58.0
Rhsim04G0204300 Rhododendron simsii HOM05D006587 ORTHO05D008487 7.9e-86 321.6 308 58.4
Ah.13g074000 Amaranthus hybridus HOM05D006587 ORTHO05D008487 1.0e-85 321.2 301 57.1
Gohir.A01G023600 Gossypium hirsutum HOM05D006587 ORTHO05D008487 1.0e-85 321.2 324 54.3
MELO3C006549.2 Cucumis melo HOM05D006587 ORTHO05D008487 2.3e-85 320.1 299 59.5
HanXRQChr13g0400281 Helianthus annuus HOM05D006587 ORTHO05D008487 2.3e-85 320.1 319 56.4
TAR633G1367 Trochodendron aralioides HOM05D006587 ORTHO05D008487 2.3e-85 320.1 319 57.7
ClCG05G005300 Citrullus lanatus HOM05D006587 ORTHO05D008487 3.0e-85 319.7 299 59.9
DCAR_002398 Daucus carota HOM05D006587 ORTHO05D008487 3.9e-85 319.3 315 56.5
TWI73G1280 Tripterygium wilfordii HOM05D006587 ORTHO05D008487 3.9e-85 319.3 306 58.2
CsaV3_3G013530 Cucumis sativus L. HOM05D006587 ORTHO05D008487 6.7e-85 318.5 299 59.2
Atru.chr4.2522 Acer truncatum HOM05D006587 ORTHO05D008487 8.8e-85 318.2 309 57.3
Actinidia23494 Actinidia chinensis HOM05D006587 ORTHO05D008487 8.8e-85 318.2 307 57.7
MD13G1186800 Malus domestica HOM05D006587 ORTHO05D008487 8.8e-85 318.2 303 58.4
CSS0008441 Camellia sinensis var. sinensis HOM05D006587 ORTHO05D008487 1.5e-84 317.4 316 56.0
PSO302G0285 Papaver somniferum HOM05D006587 ORTHO05D008487 2.6e-84 316.6 303 57.4
VMungo0720G0184 Vigna mungo HOM05D006587 ORTHO05D008487 2.6e-84 316.6 303 56.4
Thecc.04G226500 Theobroma cacao HOM05D006587 ORTHO05D008487 3.3e-84 316.2 308 57.5
Lsat_1_v5_gn_9_80941 Lactuca sativa HOM05D006587 ORTHO05D008487 4.4e-84 315.8 299 59.2
HPP92_010726 Vanilla planifolia HOM05D006587 ORTHO05D008487 4.4e-84 315.8 305 57.0
EL10As3g23313 Beta vulgaris HOM05D006587 ORTHO05D008487 5.7e-84 315.5 298 57.0
Gorai.002G024100 Gossypium raimondii HOM05D006587 ORTHO05D008487 5.7e-84 315.5 323 54.2
Sopen01g031480 Solanum pennellii HOM05D006587 ORTHO05D008487 7.4e-84 315.1 320 54.7
SGA_v2.0_scaffold10G05110 Striga asiatica HOM05D006587 ORTHO05D008487 7.4e-84 315.1 337 53.1
Actinidia40165 Actinidia chinensis HOM05D006587 ORTHO05D008487 1.7e-83 313.9 301 59.1
PSO170G4636 Papaver somniferum HOM05D006587 ORTHO05D008487 1.7e-83 313.9 303 57.1
Solyc01g079710.3 Solanum lycopersicum HOM05D006587 ORTHO05D008487 1.7e-83 313.9 320 54.4
FAN12G2172 Fragaria x ananassa HOM05D006587 ORTHO05D006391 3.7e-83 312.8 333 54.1
Glyma.20G143100 Glycine max HOM05D006587 ORTHO05D008487 4.8e-83 312.4 313 54.6
Gohir.D01G021600 Gossypium hirsutum HOM05D006587 ORTHO05D008487 4.8e-83 312.4 323 53.3
MD16G1187700 Malus domestica HOM05D006587 ORTHO05D008487 6.3e-83 312.0 319 55.2
FAN07G2036 Fragaria x ananassa HOM05D006587 ORTHO05D008487 2.4e-82 310.1 332 53.9
AL6G30780 Arabidopsis lyrata HOM05D006587 ORTHO05D008487 9.1e-82 308.1 300 56.3
AT5G19300 Arabidopsis thaliana HOM05D006587 ORTHO05D008487 9.1e-82 308.1 300 57.0
BcaB08g36587 Brassica carinata HOM05D006587 ORTHO05D008487 9.1e-82 308.1 303 57.4
TPR.G5533 Trifolium pratense HOM05D006587 ORTHO05D008487 1.5e-81 307.4 303 54.8
Aa31LG11G10390 Aethionema arabicum HOM05D006587 ORTHO05D008487 2.6e-81 306.6 305 56.4
Sabra08G0113900 Salix brachista HOM05D006587 ORTHO05D008487 3.4e-81 306.2 320 55.6
Lalb_Chr06g0164781 Lupinus albus HOM05D006587 ORTHO05D008487 1.0e-80 304.7 298 54.7
Carub.0006s1763 Capsella rubella HOM05D006587 ORTHO05D008487 1.3e-80 304.3 300 55.7
Sed0010167 Sechium edule HOM05D006587 ORTHO05D008487 1.3e-80 304.3 301 57.1
CAN.G69.11 Capsicum annuum HOM05D006587 ORTHO05D008487 1.7e-80 303.9 320 54.4
Phvul.007G053900 Phaseolus vulgaris HOM05D006587 ORTHO05D008487 1.7e-80 303.9 306 54.2
Ca_10966_v3 Cicer arietinum L. HOM05D006587 ORTHO05D008487 2.9e-80 303.1 301 53.8
Sp6g25120 Schrenkiella parvula HOM05D006587 ORTHO05D008487 2.9e-80 303.1 297 55.6
RcHm_v2.0_Chr4g0417131 Rosa chinensis HOM05D006587 ORTHO05D008487 3.8e-80 302.8 314 56.4
Thhalv10013731m.g Eutrema salsugineum HOM05D006587 ORTHO05D008487 6.5e-80 302.0 303 55.1
Medtr1g105065 Medicago truncatula HOM05D006587 ORTHO05D008487 6.5e-80 302.0 312 53.5
Psat6g209880 Pisum sativum HOM05D006587 ORTHO05D008487 6.5e-80 302.0 318 53.1
Lj5g0006939 Lotus japonicus HOM05D006587 ORTHO05D008487 1.1e-79 301.2 304 54.6
BolC9t58560H Brassica oleracea HOM05D006587 ORTHO05D008487 1.4e-79 300.8 306 56.9
CARHR193670 Cardamine hirsuta HOM05D006587 ORTHO05D008487 1.4e-79 300.8 297 56.2
BraA10t44108Z Brassica rapa HOM05D006587 ORTHO05D008487 1.9e-79 300.4 303 57.1
BcaC04g18580 Brassica carinata HOM05D006587 ORTHO05D008487 2.5e-79 300.1 306 56.9
C09p56970 Brassica napus HOM05D006587 ORTHO05D008487 2.5e-79 300.1 306 56.9
A10p20380 Brassica napus HOM05D006587 ORTHO05D008487 3.2e-79 299.7 302 57.3
Os04g0244500 Oryza sativa ssp. japonica HOM05D006587 ORTHO05D008487 5.5e-79 298.9 297 55.9
PGSC0003DMG400008999 Solanum tuberosum HOM05D006587 ORTHO05D008487 2.1e-78 297.0 354 49.4
Haze_00934 Corylus avellana HOM05D006587 ORTHO05D008487 6.1e-78 295.4 295 56.9
arahy.Tifrunner.gnm1.ann1.G9UJER Arachis hypogaea HOM05D006587 ORTHO05D008487 1.0e-77 294.7 301 53.8
arahy.Tifrunner.gnm1.ann1.HZWC9V Arachis hypogaea HOM05D006587 ORTHO05D008487 1.4e-77 294.3 301 53.8
MBI17_g12493_MAGBIO Magnolia biondii HOM05D006587 ORTHO05D008487 5.2e-77 292.4 289 55.4
Potri.010G091400 Populus trichocarpa HOM05D006587 ORTHO05D008487 6.7e-77 292.0 307 56.4
Aqoxy2G03329 Aquilegia oxysepala HOM05D006587 ORTHO05D008487 5.7e-76 288.9 301 54.2
FAN17G1856 Fragaria x ananassa HOM05D000104 ORTHO05D006391 1.6e-73 280.8 323 52.6
FAN22G2243 Fragaria x ananassa HOM05D000104 ORTHO05D006391 1.3e-72 277.7 303 53.5
Peaxi162Scf01336g00122 Petunia axillaris HOM05D006587 ORTHO05D008487 2.7e-70 270.0 303 52.1
AUR62038173 Chenopodium quinoa HOM05D006587 ORTHO05D008487 3.6e-70 269.6 266 53.8
Hma1.2p1_0511F.1_g168950 Hydrangea macrophylla HOM05D006587 ORTHO05D008487 1.2e-68 264.6 283 51.6
Nitab4.5_0000180g0030 Nicotiana tabacum HOM05D006587 ORTHO05D008487 1.5e-68 264.2 298 51.0
Dinv44504 Davidia involucrata HOM05D006587 ORTHO05D008487 7.5e-68 261.9 190 66.3
Dinv38415 Davidia involucrata HOM05D006587 ORTHO05D008487 3.7e-67 259.6 264 56.8
AUR62043415 Chenopodium quinoa HOM05D006587 ORTHO05D008487 1.8e-66 257.3 262 51.9
Lj3A741G38 Lonicera japonica HOM05D006587 ORTHO05D008487 7.5e-60 235.3 287 48.1
ATR0626G244 Amborella trichopoda HOM05D006587 ORTHO05D008487 1.3e-59 234.6 275 52.0
Pp3c7_20660 Physcomitrium patens HOM05D006587 ORTHO05D008487 9.1e-58 228.4 300 44.0
SMO364G0578 Selaginella moellendorffii HOM05D006587 ORTHO05D008487 1.2e-57 228.0 303 46.2
Mapoly0049s0075 Marchantia polymorpha HOM05D006587 ORTHO05D008487 1.9e-55 220.7 303 42.9
QL06p003535 Quercus lobata HOM05D006587 ORTHO05D008487 1.6e-54 217.6 248 54.0
Cpa.g.sc147.29 Carica papaya HOM05D006587 ORTHO05D008487 3.0e-53 213.4 259 49.4
Sabra10G0051900 Salix brachista HOM05D006587 ORTHO05D008487 1.3e-48 198.0 300 43.0
PRCOL_00002662 Prasinoderma coloniale HOM05D006587 ORTHO05D008487 3.0e-45 186.8 330 39.1
CSS0044999 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006391 2.0e-44 184.1 235 48.9
CSS0022730 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006391 3.4e-44 183.3 229 48.9
Duzib151G0305 Durio zibethinus HOM05D006587 ORTHO05D008487 1.8e-42 177.6 306 42.8
Aqoxy2G03328 Aquilegia oxysepala HOM05D006587 ORTHO05D008487 1.9e-39 167.5 300 42.3
Lalb_Chr02g0144661 Lupinus albus HOM05D006587 ORTHO05D008487 3.7e-35 153.3 198 43.4
Zm00001eb373340 Zea mays HOM05D006587 ORTHO05D008487 3.2e-34 150.2 206 49.0
Cre16.g670617 Chlamydomonas reinhardtii HOM05D006587 ORTHO05D008487 1.7e-27 127.9 350 28.9
Cfa024389 Carpinus fangiana HOM05D006587 ORTHO05D008487 7.1e-26 122.5 372 30.1
COL.COLO4_06205 Corchorus olitorius HOM05D006587 ORTHO05D008487 1.3e-24 118.2 207 43.0
QL06p003531 Quercus lobata HOM05D006587 ORTHO05D008487 3.0e-24 117.1 73 72.6
CDE05G0907 Ceratophyllum demersum HOM05D006587 ORTHO05D008487 1.5e-23 114.8 167 45.5
FvH4_4g14960 Fragaria vesca HOM05D006587 ORTHO05D008487 2.8e-22 110.5 177 45.2
Oeu040660.1 Olea europaea HOM05D006587 ORTHO05D008487 2.0e-20 104.4 167 44.9
AagrBONN_evm.TU.Sc2ySwM_340.504 Anthoceros agrestis HOM05D006587 ORTHO05D008487 1.1e-13 82.0 159 40.9
Glyma.10G250600 Glycine max HOM05D006587 ORTHO05D008487 2.4e-13 80.9 69 69.6
TAR362G0446 Trochodendron aralioides HOM05D006587 ORTHO05D008487 8.4e-11 72.4 44 86.4
AUR62038172 Chenopodium quinoa HOM05D006503 ORTHO05D008116 7.8e-09 65.9 97 38.1
Gorai.004G106600 Gossypium raimondii HOM05D006587 ORTHO05D008487 7.8e-09 65.9 53 66.0
arahy.Tifrunner.gnm1.ann1.Y836FI Arachis hypogaea HOM05D000158 ORTHO05D000197 2.3e-08 64.3 39 71.8
Gorai.012G092500 Gossypium raimondii HOM05D006587 ORTHO05D008487 1.3e-06 58.5 49 57.1
SEGI_20820 Sequoiadendron giganteum HOM05D006587 ORTHO05D008487 2.8e-06 57.4 71 53.5


User provided reference genes

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