Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15587 Utricularia gibba HOM05D000110 ORTHO05D420980 2.8e-149 531.9 276 100.0
MSTRG.15403 Avicennia marina HOM05D000110 ORTHO05D000024 1.3e-24 117.9 175 42.9
Migut.K00833 Erythranthe guttata HOM05D000110 ORTHO05D000024 4.5e-22 109.4 184 42.9
Oeu032935.1 Olea europaea HOM05D000110 ORTHO05D000024 1.3e-21 107.8 177 40.7
SalBow1G5337 Salvia bowleyana HOM05D000110 ORTHO05D000024 5.5e-20 102.4 159 42.8
Glyma.02G062700 Glycine max HOM05D000110 ORTHO05D000024 9.4e-20 101.7 174 42.0
QL06p043784 Quercus lobata HOM05D000110 ORTHO05D000024 1.2e-19 101.3 177 41.8
Migut.H00486 Erythranthe guttata HOM05D000110 ORTHO05D000024 3.6e-19 99.8 166 43.4
Haze_15192 Corylus avellana HOM05D000110 ORTHO05D000024 4.7e-19 99.4 178 42.1
vmacro05294 Vaccinium macrocarpon HOM05D000110 ORTHO05D000024 4.7e-19 99.4 159 42.8
Medtr8g079060 Medicago truncatula HOM05D000110 ORTHO05D000024 8.0e-19 98.6 166 44.0
unitig_21.g20042 Utricularia gibba HOM05D000110 ORTHO05D000024 1.0e-18 98.2 146 47.3
Thecc.01G047900 Theobroma cacao HOM05D000110 ORTHO05D000024 1.4e-18 97.8 181 42.0
TAR625G0524 Trochodendron aralioides HOM05D000110 ORTHO05D000024 1.8e-18 97.4 156 42.3
Gohir.A12G068500 Gossypium hirsutum HOM05D000110 ORTHO05D000024 2.3e-18 97.1 176 39.2
Gohir.D12G068300 Gossypium hirsutum HOM05D000110 ORTHO05D000024 2.3e-18 97.1 176 39.2
Gorai.008G071900 Gossypium raimondii HOM05D000110 ORTHO05D000024 4.0e-18 96.3 176 39.2
Phvul.003G248500 Phaseolus vulgaris HOM05D000110 ORTHO05D000024 4.0e-18 96.3 173 43.4
unitig_699.g19243 Utricularia gibba HOM05D000110 ORTHO05D000024 5.2e-18 95.9 145 46.2
VMungo0251G2991 Vigna mungo HOM05D000110 ORTHO05D000024 6.7e-18 95.5 173 42.8
Hma1.2p1_0546F.1_g176160 Hydrangea macrophylla HOM05D000110 ORTHO05D000024 8.8e-18 95.1 160 41.9
Oeu004890.1 Olea europaea HOM05D000110 ORTHO05D000024 2.0e-17 94.0 176 38.6
Cpa.g.sc15.49 Carica papaya HOM05D000110 ORTHO05D000024 2.6e-17 93.6 174 39.7
CsaV3_6G042890 Cucumis sativus L. HOM05D000110 ORTHO05D000024 2.6e-17 93.6 178 39.3
TWI09G0641 Tripterygium wilfordii HOM05D000110 ORTHO05D000024 2.6e-17 93.6 177 41.8
CiPaw.01G026600 Carya illinoinensis HOM05D000110 ORTHO05D000024 3.3e-17 93.2 184 39.7
Lj4g0022572 Lotus japonicus HOM05D000110 ORTHO05D000024 7.5e-17 92.0 174 41.4
C07p45730 Brassica napus HOM05D000110 ORTHO05D000024 9.7e-17 91.7 179 38.0
CSS0009465 Camellia sinensis var. sinensis HOM05D000110 ORTHO05D000024 9.7e-17 91.7 178 40.4
CSS0048433 Camellia sinensis var. sinensis HOM05D000110 ORTHO05D000024 9.7e-17 91.7 178 40.4
BcaC06g33299 Brassica carinata HOM05D000110 ORTHO05D000024 1.3e-16 91.3 179 38.0
MELO3C007527.2 Cucumis melo HOM05D000110 ORTHO05D000024 1.3e-16 91.3 178 38.8
DCAR_025687 Daucus carota HOM05D000110 ORTHO05D000024 1.3e-16 91.3 174 40.2
Duzib147G1091 Durio zibethinus HOM05D000110 ORTHO05D000024 1.7e-16 90.9 185 38.9
AL5G30560 Arabidopsis lyrata HOM05D000110 ORTHO05D000024 3.7e-16 89.7 186 38.2
Ca_22213_v3 Cicer arietinum L. HOM05D000110 ORTHO05D000024 3.7e-16 89.7 168 39.3
Ca_22231_v3 Cicer arietinum L. HOM05D000110 ORTHO05D000024 3.7e-16 89.7 168 39.3
Sed0005728 Sechium edule HOM05D000110 ORTHO05D000024 3.7e-16 89.7 175 39.4
ClCG01G016570 Citrullus lanatus HOM05D000110 ORTHO05D000024 4.8e-16 89.4 181 37.0
A03p47770 Brassica napus HOM05D000110 ORTHO05D000024 6.3e-16 89.0 174 38.5
BraA03t13887Z Brassica rapa HOM05D000110 ORTHO05D000024 6.3e-16 89.0 174 38.5
Ca_22214_v3 Cicer arietinum L. HOM05D000110 ORTHO05D000024 6.3e-16 89.0 165 39.4
Ca_22232_v3 Cicer arietinum L. HOM05D000110 ORTHO05D000024 6.3e-16 89.0 165 39.4
Glyma.16G145000 Glycine max HOM05D000110 ORTHO05D000024 6.3e-16 89.0 178 38.2
Manes.12G095300 Manihot esculenta HOM05D000110 ORTHO05D000024 6.3e-16 89.0 188 40.4
RcHm_v2.0_Chr2g0103751 Rosa chinensis HOM05D000110 ORTHO05D000024 6.3e-16 89.0 180 40.0
SHI08743 Sapria himalayana HOM05D000110 ORTHO05D000024 1.1e-15 88.2 160 43.8
Sopen02g034910 Solanum pennellii HOM05D000110 ORTHO05D000024 1.1e-15 88.2 182 38.5
CAN.G836.33 Capsicum annuum HOM05D000110 ORTHO05D000024 1.8e-15 87.4 179 39.1
Lsat_1_v5_gn_4_177381 Lactuca sativa HOM05D000110 ORTHO05D000024 2.4e-15 87.0 178 38.2
Potri.007G036400 Populus trichocarpa HOM05D000110 ORTHO05D000024 2.4e-15 87.0 183 39.3
CARHR159920 Cardamine hirsuta HOM05D000110 ORTHO05D000024 3.1e-15 86.7 186 37.1
Solyc02g090220.3 Solanum lycopersicum HOM05D000110 ORTHO05D000024 3.1e-15 86.7 175 38.9
Duzib187G0214 Durio zibethinus HOM05D000110 ORTHO05D000024 4.1e-15 86.3 182 39.6
PGSC0003DMG400010075 Solanum tuberosum HOM05D000110 ORTHO05D000024 4.1e-15 86.3 185 37.8
Duzib264G0983 Durio zibethinus HOM05D000110 ORTHO05D000024 5.3e-15 85.9 182 37.9
Sabra07G0031900 Salix brachista HOM05D000110 ORTHO05D000024 5.3e-15 85.9 183 38.8
BolC7t45095H Brassica oleracea HOM05D000110 ORTHO05D000024 7.0e-15 85.5 177 36.2
Thhalv10010640m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 7.0e-15 85.5 196 36.2
HanXRQChr15g0489651 Helianthus annuus HOM05D000110 ORTHO05D000024 9.1e-15 85.1 154 37.0
Nitab4.5_0001014g0060 Nicotiana tabacum HOM05D000110 ORTHO05D000024 1.2e-14 84.7 191 36.6
FAN28G2405 Fragaria x ananassa HOM05D000110 ORTHO05D000024 1.6e-14 84.3 178 39.3
Lsat_1_v5_gn_3_92320 Lactuca sativa HOM05D000110 ORTHO05D000024 1.6e-14 84.3 169 38.5
Nn6g32126 Nelumbo nucifera HOM05D000110 ORTHO05D000024 1.6e-14 84.3 157 41.4
BcaC09g50029 Brassica carinata HOM05D000110 ORTHO05D000024 2.0e-14 84.0 174 36.8
A01p24140 Brassica napus HOM05D000110 ORTHO05D000024 2.0e-14 84.0 174 36.8
C01p29830 Brassica napus HOM05D000110 ORTHO05D000024 2.0e-14 84.0 174 36.8
BolC1t02923H Brassica oleracea HOM05D000110 ORTHO05D000024 2.0e-14 84.0 174 36.8
BraA01t02326Z Brassica rapa HOM05D000110 ORTHO05D000024 2.0e-14 84.0 174 36.8
Carub.0005s1674 Capsella rubella HOM05D000110 ORTHO05D000024 3.5e-14 83.2 189 34.4
FAN26G1892 Fragaria x ananassa HOM05D000110 ORTHO05D000024 3.5e-14 83.2 186 39.2
MD15G1275300 Malus domestica HOM05D000110 ORTHO05D000024 3.5e-14 83.2 179 38.5
Nitab4.5_0000108g0290 Nicotiana tabacum HOM05D000110 ORTHO05D000024 3.5e-14 83.2 191 36.6
Gohir.A02G160400 Gossypium hirsutum HOM05D000110 ORTHO05D000024 4.5e-14 82.8 192 35.9
Gorai.003G021000 Gossypium raimondii HOM05D000110 ORTHO05D000024 4.5e-14 82.8 191 35.6
FvH4_1g14790 Fragaria vesca HOM05D000110 ORTHO05D000024 5.9e-14 82.4 186 40.3
FAN19G1558 Fragaria x ananassa HOM05D000110 ORTHO05D000024 5.9e-14 82.4 186 40.3
SGA_v2.0_scaffold15G07228 Striga asiatica HOM05D000110 ORTHO05D000024 5.9e-14 82.4 152 36.2
Prupe.7G142500 Prunus persica HOM05D000110 ORTHO05D000024 7.7e-14 82.0 183 37.2
Eucgr.H01971 Eucalyptus grandis HOM05D000110 ORTHO05D000024 1.0e-13 81.6 194 38.7
Psat0s3476g0080 Pisum sativum HOM05D000110 ORTHO05D000024 1.0e-13 81.6 173 38.7
BcaB01g00615 Brassica carinata HOM05D000110 ORTHO05D000024 1.3e-13 81.3 184 37.0
Gohir.D03G019900 Gossypium hirsutum HOM05D000110 ORTHO05D000024 1.3e-13 81.3 195 34.9
FAN23G0673 Fragaria x ananassa HOM05D000110 ORTHO05D000024 1.7e-13 80.9 186 39.2
Potri.005G131600 Populus trichocarpa HOM05D000110 ORTHO05D000024 1.7e-13 80.9 188 37.2
Peaxi162Scf00993g00011 Petunia axillaris HOM05D000110 ORTHO05D000024 2.9e-13 80.1 182 35.7
BcaC06g33101 Brassica carinata HOM05D000110 ORTHO05D000024 3.8e-13 79.7 185 36.2
Gohir.A10G093500 Gossypium hirsutum HOM05D000110 ORTHO05D000024 6.5e-13 79.0 172 37.2
Gohir.D10G094600 Gossypium hirsutum HOM05D000110 ORTHO05D000024 8.5e-13 78.6 179 37.4
Gorai.011G104000 Gossypium raimondii HOM05D000110 ORTHO05D000024 8.5e-13 78.6 179 37.4
Nn5g29390 Nelumbo nucifera HOM05D000110 ORTHO05D000024 8.5e-13 78.6 165 37.6
DCAR_010936 Daucus carota HOM05D000110 ORTHO05D000024 1.1e-12 78.2 175 37.7
CiPaw.02G012100 Carya illinoinensis HOM05D000110 ORTHO05D000024 2.5e-12 77.0 173 39.9
Manes.13G130300 Manihot esculenta HOM05D000110 ORTHO05D000024 2.5e-12 77.0 112 47.3
BcaC07g39508 Brassica carinata HOM05D000110 ORTHO05D000024 3.2e-12 76.6 157 38.2
C08p25530 Brassica napus HOM05D000110 ORTHO05D000024 3.2e-12 76.6 157 38.2
BolC8t50175H Brassica oleracea HOM05D000110 ORTHO05D000024 3.2e-12 76.6 157 38.2
TWI53G0890 Tripterygium wilfordii HOM05D000110 ORTHO05D000024 3.2e-12 76.6 181 35.4
Aa31LG4G18640 Aethionema arabicum HOM05D000110 ORTHO05D000024 5.5e-12 75.9 169 34.3
Dinv39907 Davidia involucrata HOM05D000110 ORTHO05D000024 1.2e-11 74.7 159 37.7
PGR102G2245 Punica granatum HOM05D000110 ORTHO05D000024 1.2e-11 74.7 158 38.0
Cc07_g05550 Coffea canephora HOM05D000110 ORTHO05D000024 1.6e-11 74.3 180 34.4
A09p43490 Brassica napus HOM05D000110 ORTHO05D000024 2.1e-11 73.9 167 35.9
ECA232G0892 Erigeron canadensis HOM05D000110 ORTHO05D000024 2.1e-11 73.9 170 35.3
HanXRQChr12g0361031 Helianthus annuus HOM05D000110 ORTHO05D000024 2.7e-11 73.6 150 39.3
BraA09t39814Z Brassica rapa HOM05D000110 ORTHO05D000024 3.6e-11 73.2 166 35.5
unitig_899.g14651 Utricularia gibba HOM05D000110 ORTHO05D000024 8.0e-11 72.0 168 36.9
arahy.Tifrunner.gnm1.ann1.WJU1NN Arachis hypogaea HOM05D000110 ORTHO05D000024 1.4e-10 71.2 193 36.3
arahy.Tifrunner.gnm1.ann1.XUU1M8 Arachis hypogaea HOM05D000110 ORTHO05D000024 1.4e-10 71.2 193 36.3
Solyc02g065290.1 Solanum lycopersicum HOM05D000110 ORTHO05D000024 1.4e-10 71.2 153 39.9
Sopen02g015430 Solanum pennellii HOM05D000110 ORTHO05D000024 3.0e-10 70.1 153 39.9
MD02G1161200 Malus domestica HOM05D000110 ORTHO05D000024 4.0e-10 69.7 177 35.6
Lalb_Chr05g0213131 Lupinus albus HOM05D000110 ORTHO05D000024 6.8e-10 68.9 155 36.1
Ah.02g123940 Amaranthus hybridus HOM05D000110 ORTHO05D000024 1.2e-09 68.2 190 35.3
Atru.chr3.449 Acer truncatum HOM05D000110 ORTHO05D000024 2.0e-09 67.4 212 32.5
CANSAT25G1856 Cannabis sativa HOM05D000110 ORTHO05D000024 3.4e-09 66.6 185 35.7
CiPaw.15G066200 Carya illinoinensis HOM05D000110 ORTHO05D000024 3.4e-09 66.6 176 36.4
Sabra05G0107000 Salix brachista HOM05D000110 ORTHO05D000024 5.7e-09 65.9 158 34.8
AT3G50410 Arabidopsis thaliana HOM05D000110 ORTHO05D000024 7.5e-09 65.5 187 32.6
CSS0002776 Camellia sinensis var. sinensis HOM05D000110 ORTHO05D000024 1.7e-08 64.3 171 33.3
BcaB05g23217 Brassica carinata HOM05D000110 ORTHO05D000024 2.8e-08 63.5 171 31.6
Dinv36010 Davidia involucrata HOM05D000110 ORTHO05D000024 2.8e-08 63.5 186 32.8
MBI16_g31472_MAGBIO Magnolia biondii HOM05D000110 ORTHO05D000024 6.3e-08 62.4 160 36.2
Sp5g11750 Schrenkiella parvula HOM05D000110 ORTHO05D000024 8.3e-08 62.0 198 30.3
BcaB02g09968 Brassica carinata HOM05D000110 ORTHO05D000024 1.8e-07 60.8 154 38.3
MELO3C010904.2 Cucumis melo HOM05D000110 ORTHO05D000024 1.8e-07 60.8 189 35.4
Actinidia12078 Actinidia chinensis HOM05D000110 ORTHO05D000024 2.4e-07 60.5 118 38.1
Ciclev10026061m.g Citrus clementina HOM05D000110 ORTHO05D000024 2.4e-07 60.5 190 31.1
CsaV3_2G028270 Cucumis sativus L. HOM05D000110 ORTHO05D000024 3.1e-07 60.1 195 30.8
Hma1.2p1_0260F.1_g104550 Hydrangea macrophylla HOM05D000110 ORTHO05D000024 4.1e-07 59.7 174 32.2
THA.LOC104820148 Tarenaya hassleriana HOM05D000110 ORTHO05D000024 4.1e-07 59.7 191 29.8
BolC9t54026H Brassica oleracea HOM05D000110 ORTHO05D000024 7.0e-07 58.9 159 36.5
ClCG08G015510 Citrullus lanatus HOM05D000110 ORTHO05D000024 9.1e-07 58.5 188 36.2
Aa31LG1G15490 Aethionema arabicum HOM05D000110 ORTHO05D000024 1.2e-06 58.2 154 39.6
Dinv39354 Davidia involucrata HOM05D000110 ORTHO05D000024 2.0e-06 57.4 183 32.8
Lalb_Chr09g0322921 Lupinus albus HOM05D000110 ORTHO05D000024 2.0e-06 57.4 159 35.2
HanXRQChr04g0123721 Helianthus annuus HOM05D000110 ORTHO05D000024 3.5e-06 56.6 159 33.3
HanXRQChr04g0123731 Helianthus annuus HOM05D000110 ORTHO05D000024 3.5e-06 56.6 159 33.3
Rhsim06G0041000 Rhododendron simsii HOM05D000110 ORTHO05D000024 3.5e-06 56.6 167 33.5
Sp2g29720 Schrenkiella parvula HOM05D000110 ORTHO05D000024 3.5e-06 56.6 155 34.8
PGSC0003DMG400013105 Solanum tuberosum HOM05D000110 ORTHO05D000024 3.5e-06 56.6 142 37.3
TWI36G1527 Tripterygium wilfordii HOM05D000110 ORTHO05D000024 4.5e-06 56.2 173 31.2
TWI56G0042 Tripterygium wilfordii HOM05D000110 ORTHO05D000024 4.5e-06 56.2 166 33.7
AUR62001976 Chenopodium quinoa HOM05D000110 ORTHO05D000024 5.9e-06 55.8 146 33.6
Duzib116G0771 Durio zibethinus HOM05D000110 ORTHO05D000024 5.9e-06 55.8 182 30.8
Thecc.08G016100 Theobroma cacao HOM05D000110 ORTHO05D000024 7.7e-06 55.5 189 31.7


User provided reference genes

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