Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15285 Utricularia gibba HOM05D006512 ORTHO05D008027 0.0e+00 1684.5 944 100.0
Migut.H01809 Erythranthe guttata HOM05D006512 ORTHO05D008027 1.3e-124 451.8 722 43.9
Oeu024915.1 Olea europaea HOM05D006512 ORTHO05D008027 8.2e-124 449.1 730 43.7
Nitab4.5_0004829g0090 Nicotiana tabacum HOM05D006512 ORTHO05D008027 7.2e-120 436.0 735 42.3
SGA_v2.0_scaffold172G39010 Striga asiatica HOM05D006512 ORTHO05D008027 3.6e-119 433.7 1015 40.6
CSS0043474 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 9.7e-117 425.6 761 40.3
Nitab4.5_0001393g0060 Nicotiana tabacum HOM05D006512 ORTHO05D008027 2.2e-113 414.5 734 41.1
CAN.G492.3 Capsicum annuum HOM05D006512 ORTHO05D008027 4.0e-110 403.7 699 42.3
vmacro02216 Vaccinium macrocarpon HOM05D006512 ORTHO05D008027 1.1e-107 395.6 783 38.8
Peaxi162Scf01615g00010 Petunia axillaris HOM05D006512 ORTHO05D008027 2.4e-107 394.4 685 40.4
Gohir.D05G372700 Gossypium hirsutum HOM05D006512 ORTHO05D008027 5.4e-107 393.3 748 39.2
Hund23227 Selenicereus undatus HOM05D006512 ORTHO05D008027 7.7e-106 389.4 783 37.7
Atru.chr2.3489 Acer truncatum HOM05D006512 ORTHO05D008027 1.3e-105 388.7 712 41.0
Actinidia32260 Actinidia chinensis HOM05D006512 ORTHO05D008027 3.8e-105 387.1 714 39.2
arahy.Tifrunner.gnm1.ann1.DSL29X Arachis hypogaea HOM05D006512 ORTHO05D008027 6.5e-105 386.3 733 38.9
arahy.Tifrunner.gnm1.ann1.WH2E03 Arachis hypogaea HOM05D006512 ORTHO05D008027 1.1e-104 385.6 732 39.3
Haze_09710 Corylus avellana HOM05D006512 ORTHO05D008027 1.1e-104 385.6 1014 36.9
TWI39G1152 Tripterygium wilfordii HOM05D006512 ORTHO05D008027 5.5e-104 383.3 1025 34.8
Medtr5g093560 Medicago truncatula HOM05D006512 ORTHO05D008027 9.5e-104 382.5 735 37.8
Sopen10g002210 Solanum pennellii HOM05D006512 ORTHO05D008027 2.8e-103 380.9 785 38.3
Lj1C877G6 Lonicera japonica HOM05D006512 ORTHO05D008027 1.4e-102 378.6 765 39.0
CiPaw.12G131800 Carya illinoinensis HOM05D006512 ORTHO05D008027 5.2e-102 376.7 733 39.7
TPR.G1164 Trifolium pratense HOM05D006512 ORTHO05D008027 5.2e-102 376.7 739 38.2
Duzib213G0172 Durio zibethinus HOM05D006512 ORTHO05D008027 1.2e-101 375.6 771 37.1
Ciclev10007420m.g Citrus clementina HOM05D006512 ORTHO05D008027 3.4e-101 374.0 704 39.5
PGSC0003DMG400014387 Solanum tuberosum HOM05D006512 ORTHO05D008027 3.4e-101 374.0 777 37.6
Glyma.02G293200 Glycine max HOM05D006512 ORTHO05D008027 9.8e-101 372.5 741 38.5
ECA236G0056 Erigeron canadensis HOM05D006512 ORTHO05D008027 3.7e-100 370.5 662 39.7
PSO541G1419 Papaver somniferum HOM05D006512 ORTHO05D008027 2.0e-98 364.8 1024 34.3
Prupe.4G218000 Prunus persica HOM05D006512 ORTHO05D008027 2.0e-98 364.8 777 37.6
FAN21G3399 Fragaria x ananassa HOM05D006512 ORTHO05D008027 2.3e-97 361.3 766 37.6
Lsat_1_v5_gn_7_111120 Lactuca sativa HOM05D006512 ORTHO05D008027 1.1e-96 359.0 666 38.0
VMungo0647G0540 Vigna mungo HOM05D006512 ORTHO05D008027 3.3e-96 357.5 855 35.9
FAN11G0896 Fragaria x ananassa HOM05D006512 ORTHO05D008027 7.3e-96 356.3 712 38.8
Ah.06g182620 Amaranthus hybridus HOM05D006512 ORTHO05D008027 9.5e-96 355.9 832 35.5
PGR083G0988 Punica granatum HOM05D006512 ORTHO05D008027 9.5e-96 355.9 585 43.2
EL10Ac4g07766 Beta vulgaris HOM05D006512 ORTHO05D008027 2.8e-95 354.4 712 37.1
Cpa.g.sc12.276 Carica papaya HOM05D006512 ORTHO05D008027 1.4e-94 352.1 582 41.9
Glyma.14G021200 Glycine max HOM05D006512 ORTHO05D008027 2.3e-94 351.3 850 34.4
CANSAT11G0281 Cannabis sativa HOM05D006512 ORTHO05D008027 5.2e-94 350.1 765 36.6
Nn1g07218 Nelumbo nucifera HOM05D006512 ORTHO05D008027 3.4e-93 347.4 594 42.9
Thecc.07G032200 Theobroma cacao HOM05D006512 ORTHO05D008027 9.8e-93 345.9 765 36.1
Sabra16G0234800 Salix brachista HOM05D006512 ORTHO05D008027 3.2e-91 340.9 1048 34.7
AL8G30600 Arabidopsis lyrata HOM05D006512 ORTHO05D008027 1.2e-90 339.0 843 35.3
Oeu041836.1 Olea europaea HOM05D006512 ORTHO05D008027 1.6e-90 338.6 835 40.8
AUR62020400 Chenopodium quinoa HOM05D006512 ORTHO05D008027 1.9e-88 331.6 982 35.5
AUR62015819 Chenopodium quinoa HOM05D006512 ORTHO05D008027 2.5e-88 331.3 1012 36.5
FAN25G2516 Fragaria x ananassa HOM05D006512 ORTHO05D008027 5.6e-88 330.1 761 35.6
TAR626G0449 Trochodendron aralioides HOM05D006512 ORTHO05D008027 1.2e-87 328.9 726 36.5
COL.COLO4_09692 Corchorus olitorius HOM05D006512 ORTHO05D008027 3.6e-87 327.4 584 38.9
FAN25G1139 Fragaria x ananassa HOM05D006512 ORTHO05D008027 6.2e-87 326.6 759 35.8
FAN16G2871 Fragaria x ananassa HOM05D006512 ORTHO05D008027 3.1e-86 324.3 762 35.4
Thhalv10015403m.g Eutrema salsugineum HOM05D006512 ORTHO05D008027 4.0e-86 323.9 742 35.7
RcHm_v2.0_Chr5g0040811 Rosa chinensis HOM05D006512 ORTHO05D008027 6.8e-86 323.2 727 36.6
Carub.0008s1539 Capsella rubella HOM05D006512 ORTHO05D008027 6.4e-84 316.6 796 34.2
A02p09890 Brassica napus HOM05D006512 ORTHO05D008027 5.4e-83 313.5 747 36.3
Aa31LG5G12080 Aethionema arabicum HOM05D006512 ORTHO05D008027 3.5e-82 310.8 753 35.5
THA.LOC104811621 Tarenaya hassleriana HOM05D006512 ORTHO05D008027 6.0e-82 310.1 705 36.6
BcaC03g14267 Brassica carinata HOM05D006512 ORTHO05D008027 2.3e-81 308.1 697 36.7
C02p16450 Brassica napus HOM05D006512 ORTHO05D008027 2.3e-81 308.1 697 36.7
DCAR_022584 Daucus carota HOM05D006512 ORTHO05D008027 5.0e-81 307.0 739 33.4
BolC2t07744H Brassica oleracea HOM05D006512 ORTHO05D008027 6.6e-81 306.6 694 36.9
BcaB05g22180 Brassica carinata HOM05D006512 ORTHO05D008027 3.3e-80 304.3 743 36.1
MBI07_g09094_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 6.2e-79 300.1 742 33.3
Aqoxy1G03389_Aqoxy1G03390 Aquilegia oxysepala HOM05D006512 ORTHO05D008027 1.8e-78 298.5 723 36.0
Gorai.009G441100 Gossypium raimondii HOM05D006512 ORTHO05D008027 1.2e-77 295.8 557 39.7
CSS0048002 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 1.7e-73 282.0 561 37.8
SHI26585 Sapria himalayana HOM05D006512 ORTHO05D008027 2.3e-73 281.6 788 31.7
ATR0585G019 Amborella trichopoda HOM05D006512 ORTHO05D008027 3.9e-73 280.8 670 35.2
HPP92_009832 Vanilla planifolia HOM05D006512 ORTHO05D008027 3.3e-72 277.7 846 32.7
BraA02t06053Z Brassica rapa HOM05D006512 ORTHO05D008027 2.8e-71 274.6 846 31.7
Gohir.A04G013500 Gossypium hirsutum HOM05D006512 ORTHO05D008027 6.2e-71 273.5 562 37.9
LjContig00272g0012578 Lotus japonicus HOM05D006512 ORTHO05D008027 1.1e-70 272.7 589 36.5
Solyc10g006260.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 1.8e-70 271.9 603 37.3
HanXRQChr11g0335931 Helianthus annuus HOM05D006512 ORTHO05D008027 8.9e-70 269.6 557 39.1
Os01g0698100 Oryza sativa ssp. japonica HOM05D006512 ORTHO05D008027 2.2e-68 265.0 852 32.4
PSO675G4144 Papaver somniferum HOM05D006512 ORTHO05D008027 4.9e-68 263.8 669 34.1
Potri.001G356800 Populus trichocarpa HOM05D006512 ORTHO05D008027 7.8e-66 256.5 590 34.9
Ca_06341_v3 Cicer arietinum L. HOM05D006512 ORTHO05D008027 1.0e-65 256.1 580 35.3
Duzib170G0430 Durio zibethinus HOM05D006512 ORTHO05D008027 5.1e-65 253.8 829 34.3
SEGI_25925 Sequoiadendron giganteum HOM05D006512 ORTHO05D008027 3.3e-64 251.1 584 34.2
Phvul.008G270300 Phaseolus vulgaris HOM05D006512 ORTHO05D008027 5.6e-64 250.4 649 34.5
Actinidia05076 Actinidia chinensis HOM05D006512 ORTHO05D008027 2.6e-61 241.5 367 44.4
FvH4_3g23160 Fragaria vesca HOM05D006512 ORTHO05D008027 7.6e-61 240.0 839 37.1
Manes.03G133700 Manihot esculenta HOM05D006512 ORTHO05D008027 9.9e-61 239.6 553 34.9
QL08p009135 Quercus lobata HOM05D006512 ORTHO05D008027 1.2e-58 232.6 557 35.5
Actinidia26683 Actinidia chinensis HOM05D006512 ORTHO05D008027 1.6e-58 232.3 391 39.6
CDE04G1000 Ceratophyllum demersum HOM05D006512 ORTHO05D008027 6.6e-57 226.9 697 31.7
Eucgr.F00738 Eucalyptus grandis HOM05D006512 ORTHO05D008027 8.7e-57 226.5 540 35.7
Rhsim06G0220200 Rhododendron simsii HOM05D006512 ORTHO05D008027 3.6e-55 221.1 368 41.6
Sc03g0008470 Simmondsia chinensis HOM05D006512 ORTHO05D008027 2.4e-54 218.4 508 34.4
Sp6g17030 Schrenkiella parvula HOM05D006512 ORTHO05D008027 1.9e-51 208.8 570 33.7
Mapoly0045s0119 Marchantia polymorpha HOM05D006512 ORTHO05D008027 3.9e-49 201.1 493 32.9
Lalb_Chr17g0348651 Lupinus albus HOM05D006512 ORTHO05D008027 2.8e-47 194.9 497 33.6
Psat2g014000 Pisum sativum HOM05D006512 ORTHO05D008027 1.4e-46 192.6 490 34.5
MD11G1213200 Malus domestica HOM05D006512 ORTHO05D008027 4.6e-42 177.6 550 32.9
Dinv40780 Davidia involucrata HOM05D006512 ORTHO05D008027 5.6e-40 170.6 356 38.2
Cc05_g14000 Coffea canephora HOM05D006512 ORTHO05D008027 2.1e-39 168.7 427 35.4
AT5G55100 Arabidopsis thaliana HOM05D006512 ORTHO05D008027 2.7e-34 151.8 543 32.2
GSVIVG01037687001 Vitis vinifera HOM05D006512 ORTHO05D008027 3.5e-34 151.4 322 36.0
Cc05_g14010 Coffea canephora HOM05D006512 ORTHO05D008027 1.0e-33 149.8 144 59.0
GSVIVG01037689001 Vitis vinifera HOM05D006512 ORTHO05D008027 1.5e-32 146.0 143 56.6
HanXRQChr11g0335921 Helianthus annuus HOM05D006512 ORTHO05D008027 7.4e-32 143.7 138 54.3
MBI07_g37843_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 1.1e-30 139.8 648 27.5
QL08p009130 Quercus lobata HOM05D006512 ORTHO05D008027 3.1e-30 138.3 145 56.6
Solyc10g006250.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 1.7e-28 132.5 139 52.5
CARHR268440 Cardamine hirsuta HOM05D006512 ORTHO05D008027 3.8e-28 131.3 141 53.2
Zm00001eb360910 Zea mays HOM05D006512 ORTHO05D008027 5.5e-27 127.5 508 28.7
CANSAT56G4300 Cannabis sativa HOM05D006512 ORTHO05D008027 6.1e-26 124.0 139 54.7
MD11G1213100 Malus domestica HOM05D006512 ORTHO05D008027 2.3e-25 122.1 143 48.3
Eucgr.F00737 Eucalyptus grandis HOM05D006512 ORTHO05D008027 5.1e-25 120.9 146 52.1
Lalb_Chr17g0348641 Lupinus albus HOM05D006512 ORTHO05D008027 1.1e-24 119.8 142 50.0
VMungo0251G0907 Vigna mungo HOM05D001291 ORTHO05D008027 2.2e-12 79.0 75 56.0
CBR_g49368 Chara braunii HOM05D000019 ORTHO05D000048 4.2e-11 74.7 69 50.7
Cre11.g481700 Chlamydomonas reinhardtii HOM05D006512 ORTHO05D008027 4.8e-07 61.2 57 43.9
PRCOL_00002654 Prasinoderma coloniale HOM05D002594 ORTHO05D003499 1.8e-06 59.3 55 36.4


User provided reference genes

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