Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15255 Utricularia gibba HOM05D001415 ORTHO05D001075 7.0e-38 160.6 113 100.0
unitig_746.g26724 Utricularia gibba HOM05D001415 ORTHO05D001075 1.5e-32 142.9 113 76.1
MSTRG.21203 Avicennia marina HOM05D001415 ORTHO05D001075 5.2e-17 91.3 114 58.8
Oeu045612.1 Olea europaea HOM05D001415 ORTHO05D001075 2.0e-13 79.3 117 45.3
Oeu053887.1 Olea europaea HOM05D001415 ORTHO05D001075 6.0e-13 77.8 117 52.1
Cc01_g13180 Coffea canephora HOM05D001415 ORTHO05D001075 7.8e-13 77.4 111 66.7
CAN.G141.1 Capsicum annuum HOM05D018369 ORTHO05D001075 1.5e-11 73.2 109 61.5
CAN.G394.70 Capsicum annuum HOM05D018369 ORTHO05D001075 2.1e-10 69.3 120 53.3
Solyc06g005610.1 Solanum lycopersicum HOM05D018369 ORTHO05D001075 4.7e-10 68.2 109 63.3
PGSC0003DMG400002141 Solanum tuberosum HOM05D018369 ORTHO05D001075 4.7e-10 68.2 109 63.3
HanXRQChr01g0010481 Helianthus annuus HOM05D001415 ORTHO05D001075 6.2e-10 67.8 110 42.7
HanXRQChr11g0327601 Helianthus annuus HOM05D001415 ORTHO05D001075 8.1e-10 67.4 106 64.2
Solyc06g076320.1 Solanum lycopersicum HOM05D001415 ORTHO05D001075 8.1e-10 67.4 120 55.8
SalBow3G1548 Salvia bowleyana HOM05D001415 ORTHO05D001075 1.8e-09 66.2 34 85.3
Lsat_1_v5_gn_5_169241 Lactuca sativa HOM05D001415 ORTHO05D001075 3.1e-09 65.5 119 46.2
Migut.B01170 Erythranthe guttata HOM05D001415 ORTHO05D001075 5.2e-09 64.7 108 49.1
Thecc.09G317800 Theobroma cacao HOM05D001415 ORTHO05D001075 5.2e-09 64.7 112 57.1
Gohir.A05G093900 Gossypium hirsutum HOM05D001415 ORTHO05D001075 8.9e-09 63.9 111 54.1
Gohir.D05G094400 Gossypium hirsutum HOM05D001415 ORTHO05D001075 8.9e-09 63.9 111 54.1
Gorai.009G097500 Gossypium raimondii HOM05D001415 ORTHO05D001075 8.9e-09 63.9 111 54.1
Duzib150G0909 Durio zibethinus HOM05D001415 ORTHO05D001075 3.4e-08 62.0 107 57.0
Duzib168G2106 Durio zibethinus HOM05D001415 ORTHO05D001075 3.4e-08 62.0 111 46.8
Ah.15g098480 Amaranthus hybridus HOM05D001415 ORTHO05D001075 7.5e-08 60.8 131 32.8
CANSAT54G2158 Cannabis sativa HOM05D001415 ORTHO05D001075 1.3e-07 60.1 35 74.3
Sopen06g001570 Solanum pennellii HOM05D018369 ORTHO05D001075 1.3e-07 60.1 105 62.9
Duzib170G0931 Durio zibethinus HOM05D001415 ORTHO05D001075 2.2e-07 59.3 107 52.3
HanXRQChr01g0027111 Helianthus annuus HOM05D008503 ORTHO05D001075 2.2e-07 59.3 109 43.1
Sc21g0005940 Simmondsia chinensis HOM05D001415 ORTHO05D001075 2.2e-07 59.3 34 67.6
TWI79G1693 Tripterygium wilfordii HOM05D001415 ORTHO05D001075 2.9e-07 58.9 106 39.6
Cpa.g.sc81.113 Carica papaya HOM05D001415 ORTHO05D001075 3.7e-07 58.5 36 66.7
Sc12g0001300 Simmondsia chinensis HOM05D001415 ORTHO05D001075 3.7e-07 58.5 34 67.6
Atru.chr3.3969 Acer truncatum HOM05D001415 ORTHO05D001075 6.4e-07 57.8 108 49.1
Ciclev10030229m.g Citrus clementina HOM05D001415 ORTHO05D001075 6.4e-07 57.8 109 45.0
TWI31G0218 Tripterygium wilfordii HOM05D001415 ORTHO05D001075 6.4e-07 57.8 106 37.7
FvH4_3g04210 Fragaria vesca HOM05D008503 ORTHO05D001075 8.3e-07 57.4 39 61.5
CSS0027316 Camellia sinensis var. sinensis HOM05D001415 ORTHO05D001075 1.1e-06 57.0 39 61.5
Cfa011527 Carpinus fangiana HOM05D001415 ORTHO05D001075 1.1e-06 57.0 36 63.9
Haze_24132 Corylus avellana HOM05D001415 ORTHO05D001075 1.1e-06 57.0 36 63.9
Potri.009G034300 Populus trichocarpa HOM05D001415 ORTHO05D001075 1.1e-06 57.0 36 63.9
CiPaw.13G091000 Carya illinoinensis HOM05D001415 ORTHO05D001075 1.4e-06 56.6 33 69.7
Lsat_1_v5_gn_9_24441 Lactuca sativa HOM05D008503 ORTHO05D001075 1.4e-06 56.6 109 60.6
Phvul.011G062700 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 1.4e-06 56.6 106 54.7
Sed0002507 Sechium edule HOM05D001415 ORTHO05D001075 1.4e-06 56.6 32 71.9
Sed0023003 Sechium edule HOM05D001415 ORTHO05D001075 1.4e-06 56.6 32 71.9
MD03G1087500 Malus domestica HOM05D001415 ORTHO05D001075 2.4e-06 55.8 106 48.1
Medtr4g064520 Medicago truncatula HOM05D001415 ORTHO05D001075 2.4e-06 55.8 106 46.2
RcHm_v2.0_Chr5g0065921 Rosa chinensis HOM05D001415 ORTHO05D001075 2.4e-06 55.8 109 55.0
Hma1.2p1_0757F.1_g213305 Hydrangea macrophylla HOM05D001415 ORTHO05D001075 4.1e-06 55.1 110 60.9
Hma1.2p1_0757F.1_g213310 Hydrangea macrophylla HOM05D001415 ORTHO05D001075 4.1e-06 55.1 110 60.9
COL.COLO4_18559 Corchorus olitorius HOM05D001415 ORTHO05D001075 5.4e-06 54.7 114 49.1
DCAR_027603 Daucus carota HOM05D001415 ORTHO05D001075 5.4e-06 54.7 37 59.5
BcaB02g09096 Brassica carinata HOM05D001415 ORTHO05D001075 7.1e-06 54.3 37 62.2
BcaC02g07426 Brassica carinata HOM05D001415 ORTHO05D001075 7.1e-06 54.3 37 59.5
BcaC02g12100 Brassica carinata HOM05D001415 ORTHO05D001075 7.1e-06 54.3 37 62.2
A05p06700 Brassica napus HOM05D001415 ORTHO05D001075 7.1e-06 54.3 37 62.2
C04p07830 Brassica napus HOM05D001415 ORTHO05D001075 7.1e-06 54.3 37 62.2
C04p67490 Brassica napus HOM05D001415 ORTHO05D001075 7.1e-06 54.3 37 59.5
BolC4t22402H Brassica oleracea HOM05D001415 ORTHO05D001075 7.1e-06 54.3 37 62.2
BraA05t19637Z Brassica rapa HOM05D001415 ORTHO05D001075 7.1e-06 54.3 37 62.2
Gohir.A13G227216 Gossypium hirsutum HOM05D001415 ORTHO05D001075 7.1e-06 54.3 36 58.3
Gohir.D13G232500 Gossypium hirsutum HOM05D001415 ORTHO05D001075 7.1e-06 54.3 36 58.3
Gorai.013G263300 Gossypium raimondii HOM05D001415 ORTHO05D001075 7.1e-06 54.3 36 58.3
Medtr2g097570 Medicago truncatula HOM05D001415 ORTHO05D001075 7.1e-06 54.3 33 63.6
AL4G37150 Arabidopsis lyrata HOM05D001415 ORTHO05D001075 9.2e-06 53.9 37 59.5
AT2G39705 Arabidopsis thaliana HOM05D001415 ORTHO05D001075 9.2e-06 53.9 37 59.5
A04p22250 Brassica napus HOM05D008503 ORTHO05D001075 9.2e-06 53.9 112 45.5
A04p30340 Brassica napus HOM05D001415 ORTHO05D001075 9.2e-06 53.9 37 59.5
BolC4t28246H Brassica oleracea HOM05D001415 ORTHO05D001075 9.2e-06 53.9 37 59.5
BraA04t17777Z Brassica rapa HOM05D008503 ORTHO05D001075 9.2e-06 53.9 112 45.5
BraA04t18474Z Brassica rapa HOM05D001415 ORTHO05D001075 9.2e-06 53.9 37 59.5
Carub.0004s2175 Capsella rubella HOM05D001415 ORTHO05D001075 9.2e-06 53.9 37 59.5
MELO3C025900.2 Cucumis melo HOM05D001415 ORTHO05D001075 9.2e-06 53.9 31 71.0
Thhalv10017695m.g Eutrema salsugineum HOM05D001415 ORTHO05D001075 9.2e-06 53.9 37 59.5
PGR102G0519 Punica granatum HOM05D001415 ORTHO05D001075 9.2e-06 53.9 33 72.7
Sp4g21960 Schrenkiella parvula HOM05D001415 ORTHO05D001075 9.2e-06 53.9 37 59.5


User provided reference genes

Program Settings