Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15245 Utricularia gibba HOM05D004731 ORTHO05D005577 6.5e-159 563.9 269 100.0
SalBow7G1245 Salvia bowleyana HOM05D004731 ORTHO05D005577 3.1e-124 448.7 254 81.1
Migut.M00410 Erythranthe guttata HOM05D004731 ORTHO05D005577 1.3e-122 443.4 254 79.5
QL08p033580 Quercus lobata HOM05D004731 ORTHO05D005577 4.9e-122 441.4 254 77.6
Actinidia09705 Actinidia chinensis HOM05D004731 ORTHO05D005577 6.4e-122 441.0 254 79.9
QL08p033547 Quercus lobata HOM05D004731 ORTHO05D005577 8.3e-122 440.7 254 77.2
Atru.chr6.3161 Acer truncatum HOM05D004731 ORTHO05D005577 1.9e-121 439.5 254 79.1
Gohir.A13G093600 Gossypium hirsutum HOM05D004731 ORTHO05D005577 1.9e-121 439.5 254 78.0
ClCG02G008490 Citrullus lanatus HOM05D004731 ORTHO05D005577 3.2e-121 438.7 255 78.4
CAN.G921.14 Capsicum annuum HOM05D004731 ORTHO05D005577 4.1e-121 438.3 254 78.0
Gohir.A03G109600 Gossypium hirsutum HOM05D004731 ORTHO05D005577 4.1e-121 438.3 254 79.1
MELO3C019243.2 Cucumis melo HOM05D004731 ORTHO05D005577 5.4e-121 438.0 255 78.8
CiPaw.03G162000 Carya illinoinensis HOM05D004731 ORTHO05D005577 7.1e-121 437.6 254 78.3
Gorai.013G099800 Gossypium raimondii HOM05D004731 ORTHO05D005577 7.1e-121 437.6 254 77.6
Nn1g07047 Nelumbo nucifera HOM05D004731 ORTHO05D005577 9.2e-121 437.2 254 76.4
CsaV3_2G035120 Cucumis sativus L. HOM05D004731 ORTHO05D005577 1.2e-120 436.8 254 78.3
DCAR_021183 Daucus carota HOM05D004731 ORTHO05D005577 1.6e-120 436.4 254 78.3
DCAR_012950 Daucus carota HOM05D004731 ORTHO05D005577 2.1e-120 436.0 254 78.7
PSO675G8406 Papaver somniferum HOM05D004731 ORTHO05D005577 2.1e-120 436.0 254 77.6
Rhsim06G0159200 Rhododendron simsii HOM05D004731 ORTHO05D005577 2.1e-120 436.0 263 77.2
Sed0023583 Sechium edule HOM05D004731 ORTHO05D005577 2.1e-120 436.0 254 78.3
PSO541G0248 Papaver somniferum HOM05D004731 ORTHO05D005577 2.7e-120 435.6 254 77.6
Ciclev10014655m.g Citrus clementina HOM05D004731 ORTHO05D005577 3.5e-120 435.3 254 77.2
Eucgr.K00802 Eucalyptus grandis HOM05D004731 ORTHO05D005577 4.6e-120 434.9 254 77.6
Gohir.D02G134400 Gossypium hirsutum HOM05D004731 ORTHO05D005577 1.0e-119 433.7 254 77.6
Potri.007G122900 Populus trichocarpa HOM05D004731 ORTHO05D005577 1.0e-119 433.7 254 78.0
Cfa014429 Carpinus fangiana HOM05D004731 ORTHO05D005577 1.7e-119 433.0 254 76.8
Hund24408 Selenicereus undatus HOM05D004731 ORTHO05D005577 1.7e-119 433.0 255 78.0
Thecc.02G312600 Theobroma cacao HOM05D004731 ORTHO05D005577 2.3e-119 432.6 254 76.8
Cpa.g.sc8.225 Carica papaya HOM05D004731 ORTHO05D005577 3.0e-119 432.2 254 77.6
PGR142G3606 Punica granatum HOM05D004731 ORTHO05D005577 3.9e-119 431.8 254 78.0
Gorai.005G150300 Gossypium raimondii HOM05D004731 ORTHO05D005577 5.1e-119 431.4 254 76.4
Oeu011087.1 Olea europaea HOM05D004731 ORTHO05D005577 8.6e-119 430.6 254 76.8
Nitab4.5_0001176g0080 Nicotiana tabacum HOM05D004731 ORTHO05D005577 1.1e-118 430.3 254 76.0
Manes.12G076000 Manihot esculenta HOM05D004731 ORTHO05D005577 1.9e-118 429.5 254 75.2
TWI36G0780 Tripterygium wilfordii HOM05D004731 ORTHO05D005577 1.9e-118 429.5 254 77.2
Aa31LG8G8350 Aethionema arabicum HOM05D004731 ORTHO05D005577 2.5e-118 429.1 254 76.0
Aqoxy4G01979 Aquilegia oxysepala HOM05D004731 ORTHO05D005577 3.3e-118 428.7 254 76.4
Prupe.3G219100 Prunus persica HOM05D004731 ORTHO05D005577 3.3e-118 428.7 254 76.4
CSS0029719 Camellia sinensis var. sinensis HOM05D004731 ORTHO05D005577 5.6e-118 427.9 254 77.6
CSS0044333 Camellia sinensis var. sinensis HOM05D004731 ORTHO05D005577 5.6e-118 427.9 254 77.2
Potri.017G036900 Populus trichocarpa HOM05D004731 ORTHO05D005577 5.6e-118 427.9 254 77.2
Sopen07g026110 Solanum pennellii HOM05D004731 ORTHO05D005577 7.3e-118 427.6 254 76.0
TWI75G0012 Tripterygium wilfordii HOM05D004731 ORTHO05D005577 7.3e-118 427.6 254 76.0
Nitab4.5_0010201g0030 Nicotiana tabacum HOM05D004731 ORTHO05D005577 9.5e-118 427.2 254 75.6
Peaxi162Scf00007g01115 Petunia axillaris HOM05D004731 ORTHO05D005577 9.5e-118 427.2 254 76.0
FAN14G3935 Fragaria x ananassa HOM05D004731 ORTHO05D005577 1.6e-117 426.4 263 73.4
HanXRQChr04g0110581 Helianthus annuus HOM05D004731 ORTHO05D005577 1.6e-117 426.4 254 77.2
MD09G1106500 Malus domestica HOM05D004731 ORTHO05D005577 1.6e-117 426.4 254 76.0
BraA03t13397Z Brassica rapa HOM05D004731 ORTHO05D005577 2.8e-117 425.6 254 75.6
FAN02G3012 Fragaria x ananassa HOM05D004731 ORTHO05D005577 2.8e-117 425.6 263 73.0
FAN05G5305 Fragaria x ananassa HOM05D004731 ORTHO05D005577 3.6e-117 425.2 265 73.2
AUR62028388 Chenopodium quinoa HOM05D004731 ORTHO05D005577 4.7e-117 424.9 253 77.1
Manes.13G072200 Manihot esculenta HOM05D004731 ORTHO05D005577 6.2e-117 424.5 254 76.0
PGSC0003DMG400025487 Solanum tuberosum HOM05D004731 ORTHO05D005577 6.2e-117 424.5 254 74.8
DCAR_019287 Daucus carota HOM05D004731 ORTHO05D005577 8.1e-117 424.1 254 76.4
Nitab4.5_0003509g0010 Nicotiana tabacum HOM05D004731 ORTHO05D005577 8.1e-117 424.1 254 76.8
SGA_v2.0_scaffold34G13870 Striga asiatica HOM05D004731 ORTHO05D005577 8.1e-117 424.1 265 73.2
ATR0697G137 Amborella trichopoda HOM05D004731 ORTHO05D005577 1.1e-116 423.7 259 74.1
Lsat_1_v5_gn_8_128420 Lactuca sativa HOM05D004731 ORTHO05D005577 1.1e-116 423.7 254 76.8
BcaB06g26278 Brassica carinata HOM05D004731 ORTHO05D005577 1.4e-116 423.3 254 74.8
BcaC05g28137 Brassica carinata HOM05D004731 ORTHO05D005577 1.4e-116 423.3 254 74.8
A03p42440 Brassica napus HOM05D004731 ORTHO05D005577 1.4e-116 423.3 254 75.2
A05p27010 Brassica napus HOM05D004731 ORTHO05D005577 1.4e-116 423.3 254 74.8
FAN09G0477 Fragaria x ananassa HOM05D004731 ORTHO05D005577 1.4e-116 423.3 263 73.8
C03p51920 Brassica napus HOM05D004731 ORTHO05D005577 1.8e-116 422.9 254 74.8
BraA05t21584Z Brassica rapa HOM05D004731 ORTHO05D005577 3.1e-116 422.2 254 74.4
TAR624G1207 Trochodendron aralioides HOM05D004731 ORTHO05D005577 3.1e-116 422.2 246 77.2
Phvul.011G105500 Phaseolus vulgaris HOM05D004731 ORTHO05D005577 4.0e-116 421.8 254 74.4
Phvul.011G106801 Phaseolus vulgaris HOM05D004731 ORTHO05D005577 4.0e-116 421.8 254 74.4
C05p41690 Brassica napus HOM05D004731 ORTHO05D005577 5.2e-116 421.4 254 74.4
BolC5t32904H Brassica oleracea HOM05D004731 ORTHO05D005577 5.2e-116 421.4 254 74.4
Glyma.12G100500 Glycine max HOM05D004731 ORTHO05D005577 6.8e-116 421.0 254 74.0
Thhalv10022122m.g Eutrema salsugineum HOM05D004731 ORTHO05D005577 8.9e-116 420.6 254 74.4
THA.LOC104808494 Tarenaya hassleriana HOM05D004731 ORTHO05D005577 8.9e-116 420.6 254 75.2
BcaC01g03487 Brassica carinata HOM05D004731 ORTHO05D005577 1.2e-115 420.2 254 74.8
BolC3t17478H Brassica oleracea HOM05D004731 ORTHO05D005577 1.2e-115 420.2 254 74.8
AUR62039771 Chenopodium quinoa HOM05D004731 ORTHO05D005577 1.5e-115 419.9 253 76.3
FvH4_6g43440 Fragaria vesca HOM05D004731 ORTHO05D005577 2.6e-115 419.1 254 74.4
RcHm_v2.0_Chr2g0159821 Rosa chinensis HOM05D004731 ORTHO05D005577 2.6e-115 419.1 254 74.4
ECA233G0706 Erigeron canadensis HOM05D004731 ORTHO05D005577 4.4e-115 418.3 254 76.0
ATR0697G164 Amborella trichopoda HOM05D004731 ORTHO05D005577 5.8e-115 417.9 254 74.0
vmacro12222 Vaccinium macrocarpon HOM05D004731 ORTHO05D005577 5.8e-115 417.9 246 77.6
arahy.Tifrunner.gnm1.ann1.X0NGMJ Arachis hypogaea HOM05D004731 ORTHO05D005577 7.6e-115 417.5 254 74.8
BcaB04g20569 Brassica carinata HOM05D004731 ORTHO05D005577 7.6e-115 417.5 254 73.2
arahy.Tifrunner.gnm1.ann1.TKPZ56 Arachis hypogaea HOM05D004731 ORTHO05D005577 9.9e-115 417.2 254 74.8
BcaB04g20567 Brassica carinata HOM05D004731 ORTHO05D005577 1.7e-114 416.4 254 72.8
VMungo1127G2299 Vigna mungo HOM05D004731 ORTHO05D005577 2.2e-114 416.0 254 73.2
Carub.0003s2177 Capsella rubella HOM05D004731 ORTHO05D005577 2.9e-114 415.6 254 73.6
MBI02_g10107_MAGBIO Magnolia biondii HOM05D004731 ORTHO05D005577 2.9e-114 415.6 246 77.2
Sp3g19730 Schrenkiella parvula HOM05D004731 ORTHO05D005577 2.9e-114 415.6 254 73.2
Lj1P757T15 Lonicera japonica HOM05D004731 ORTHO05D005577 6.4e-114 414.5 255 74.5
Lalb_Chr19g0135731 Lupinus albus HOM05D004731 ORTHO05D005577 3.2e-113 412.1 254 73.2
Glyma.06G303200 Glycine max HOM05D004731 ORTHO05D005577 5.4e-113 411.4 255 72.9
AL3G35840 Arabidopsis lyrata HOM05D004731 ORTHO05D005577 2.1e-112 409.5 254 72.0
EL10Ac8g18891 Beta vulgaris HOM05D004731 ORTHO05D005577 2.1e-112 409.5 245 75.5
AT3G21720 Arabidopsis thaliana HOM05D004731 ORTHO05D005577 7.8e-112 407.5 254 72.0
Nn1g03615 Nelumbo nucifera HOM05D004731 ORTHO05D005577 7.8e-112 407.5 254 72.4
CARHR097670 Cardamine hirsuta HOM05D004731 ORTHO05D005577 1.3e-111 406.8 254 72.8
MD17G1094300 Malus domestica HOM05D004731 ORTHO05D005577 3.9e-111 405.2 240 75.8
ATR0697G058 Amborella trichopoda HOM05D004731 ORTHO05D005577 6.6e-111 404.4 254 72.4
Os07g0529000 Oryza sativa ssp. japonica HOM05D004731 ORTHO05D005577 6.6e-111 404.4 254 72.8
Lalb_Chr03g0028811 Lupinus albus HOM05D004731 ORTHO05D005577 8.6e-111 404.1 255 72.5
Medtr4g046757 Medicago truncatula HOM05D004731 ORTHO05D005577 3.3e-110 402.1 252 72.6
Psat7g179960 Pisum sativum HOM05D004731 ORTHO05D005577 4.3e-110 401.7 252 73.4
CANSAT64G0826 Cannabis sativa HOM05D004731 ORTHO05D005577 5.6e-110 401.4 254 72.4
Zm00001eb323090 Zea mays HOM05D004731 ORTHO05D005577 5.6e-110 401.4 255 72.5
HPP92_012326 Vanilla planifolia HOM05D004731 ORTHO05D005577 3.6e-109 398.7 254 70.1
Lj3g0018668 Lotus japonicus HOM05D004731 ORTHO05D005577 6.2e-109 397.9 254 70.5
Ah.09g228590 Amaranthus hybridus HOM05D004731 ORTHO05D005577 2.0e-107 392.9 239 74.5
Ca_27733_v3 Cicer arietinum L. HOM05D004731 ORTHO05D005577 8.4e-106 387.5 251 71.7
Sabra07G0099600 Salix brachista HOM05D004731 ORTHO05D005577 4.2e-105 385.2 223 78.5
SEGI_22707 Sequoiadendron giganteum HOM05D004731 ORTHO05D005577 1.6e-104 383.3 254 68.9
Cc05_g04940 Coffea canephora HOM05D004731 ORTHO05D005577 6.6e-103 377.9 229 75.5
Haze_12887 Corylus avellana HOM05D004731 ORTHO05D005577 5.6e-102 374.8 265 66.8
SEGI_12486 Sequoiadendron giganteum HOM05D004731 ORTHO05D005577 5.3e-100 368.2 256 64.8
AagrBONN_evm.TU.Sc2ySwM_344.2376 Anthoceros agrestis HOM05D004731 ORTHO05D005577 3.6e-93 345.5 254 60.6
GSVIVG01030608001 Vitis vinifera HOM05D004731 ORTHO05D005577 3.1e-92 342.4 225 72.4
Gohir.D13G087500 Gossypium hirsutum HOM05D004731 ORTHO05D005577 5.3e-92 341.7 203 74.4
CDE11G0460 Ceratophyllum demersum HOM05D004731 ORTHO05D005577 6.9e-92 341.3 195 77.4
SMO196G0149 Selaginella moellendorffii HOM05D004731 ORTHO05D005577 6.9e-92 341.3 252 63.1
CBR_g8290 Chara braunii HOM05D004731 ORTHO05D005577 1.4e-89 333.6 253 61.7
Pp3c7_2440 Physcomitrium patens HOM05D004731 ORTHO05D005577 1.5e-86 323.6 253 58.1
Pp3c7_2470 Physcomitrium patens HOM05D004731 ORTHO05D005577 1.5e-86 323.6 253 58.1
Mapoly0115s0061 Marchantia polymorpha HOM05D004731 ORTHO05D005577 9.0e-84 314.3 251 57.4
Mapoly0023s0108 Marchantia polymorpha HOM05D004731 ORTHO05D005577 7.6e-83 311.2 252 56.0
CDE05G2280 Ceratophyllum demersum HOM05D004731 ORTHO05D005577 1.6e-77 293.5 188 68.6
Cfa025720 Carpinus fangiana HOM05D004731 ORTHO05D005577 3.2e-65 252.7 252 52.4
COL.COLO4_27682 Corchorus olitorius HOM05D004731 ORTHO05D005577 6.7e-63 245.0 131 84.0
Dinv02740 Davidia involucrata HOM05D004731 ORTHO05D005577 1.7e-61 240.4 130 84.6
Peaxi162Scf00932g00022 Petunia axillaris HOM05D004731 ORTHO05D005577 1.1e-54 217.6 121 83.5
Dinv39693 Davidia involucrata HOM05D004731 ORTHO05D005577 7.4e-54 214.9 143 70.6
Cfa027059 Carpinus fangiana HOM05D004731 ORTHO05D005577 8.5e-50 201.4 251 38.6
BcaB04g20566 Brassica carinata HOM05D004731 ORTHO05D005577 2.7e-35 153.3 122 55.7
Cre06.g282800 Chlamydomonas reinhardtii HOM05D004731 ORTHO05D005577 1.6e-32 144.1 168 42.3
Haze_27171 Corylus avellana HOM05D004731 ORTHO05D005577 2.3e-31 140.2 175 42.3
Sc06g0009530 Simmondsia chinensis HOM05D004731 ORTHO05D005577 6.8e-23 112.1 76 64.5
HPP92_012390 Vanilla planifolia HOM05D004731 ORTHO05D005577 9.2e-20 101.7 51 92.2
CDE05G2484 Ceratophyllum demersum HOM05D004731 ORTHO05D005577 1.4e-15 87.8 43 90.7
HPP92_012389 Vanilla planifolia HOM05D004731 ORTHO05D005577 2.9e-13 80.1 47 70.2
Dinv02741 Davidia involucrata HOM05D004731 ORTHO05D005577 1.7e-10 70.9 49 63.3
BcaB04g20563 Brassica carinata HOM05D004731 ORTHO05D005577 4.7e-08 62.8 52 51.9
HPP92_012388 Vanilla planifolia HOM05D004731 ORTHO05D005577 7.5e-06 55.5 47 53.2


User provided reference genes

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