Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14962 Utricularia gibba HOM05D003918 ORTHO05D004494 3.6e-45 184.5 89 100.0
PGR119G0927 Punica granatum HOM05D003918 ORTHO05D004494 5.7e-43 177.2 89 95.5
CiPaw.13G144800 Carya illinoinensis HOM05D003918 ORTHO05D004494 7.4e-43 176.8 89 94.4
Manes.04G012300 Manihot esculenta HOM05D003918 ORTHO05D004494 7.4e-43 176.8 89 94.4
Cc01_g10200 Coffea canephora HOM05D003918 ORTHO05D004494 9.7e-43 176.4 89 94.4
Eucgr.J00392 Eucalyptus grandis HOM05D003918 ORTHO05D004494 9.7e-43 176.4 89 94.4
CiPaw.14G106800 Carya illinoinensis HOM05D003918 ORTHO05D004494 1.3e-42 176.0 89 94.4
COL.COLO4_19215 Corchorus olitorius HOM05D003918 ORTHO05D004494 1.3e-42 176.0 89 95.5
QL01p014884 Quercus lobata HOM05D003918 ORTHO05D004494 1.3e-42 176.0 88 94.3
TWI79G0503 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 1.3e-42 176.0 89 94.4
TWI79G0939 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 1.3e-42 176.0 89 94.4
Gohir.A05G085800 Gossypium hirsutum HOM05D003918 ORTHO05D004494 1.7e-42 175.6 89 94.4
Gohir.D05G087700 Gossypium hirsutum HOM05D003918 ORTHO05D004494 1.7e-42 175.6 89 94.4
Gorai.009G089700 Gossypium raimondii HOM05D003918 ORTHO05D004494 1.7e-42 175.6 89 94.4
Ciclev10029696m.g Citrus clementina HOM05D003918 ORTHO05D004494 2.2e-42 175.3 89 94.4
Duzib168G2331 Durio zibethinus HOM05D003918 ORTHO05D004494 2.2e-42 175.3 89 94.4
Hma1.2p1_0051F.1_g029570 Hydrangea macrophylla HOM05D003918 ORTHO05D004494 2.8e-42 174.9 89 93.3
Thecc.09G297000 Theobroma cacao HOM05D003918 ORTHO05D004494 3.7e-42 174.5 89 94.4
TWI31G0950 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 3.7e-42 174.5 89 94.4
Haze_03482 Corylus avellana HOM05D003918 ORTHO05D004494 4.8e-42 174.1 89 93.3
Glyma.11G192100 Glycine max HOM05D003918 ORTHO05D004494 4.8e-42 174.1 89 93.3
Glyma.12G082300 Glycine max HOM05D003918 ORTHO05D004494 4.8e-42 174.1 89 93.3
Lj3g0024072 Lotus japonicus HOM05D003918 ORTHO05D004494 4.8e-42 174.1 89 93.3
Phvul.011G086900 Phaseolus vulgaris HOM05D003918 ORTHO05D004494 4.8e-42 174.1 89 93.3
CSS0025262 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 6.3e-42 173.7 86 95.3
CSS0028017 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 6.3e-42 173.7 86 95.3
Nitab4.5_0000173g0230 Nicotiana tabacum HOM05D003918 ORTHO05D004494 8.2e-42 173.3 89 93.3
Sc21g0004230 Simmondsia chinensis HOM05D003918 ORTHO05D004494 8.2e-42 173.3 88 93.2
Ca_10762_v3 Cicer arietinum L. HOM05D003918 ORTHO05D004494 1.1e-41 172.9 89 92.1
ClCG01G013880 Citrullus lanatus HOM05D003918 ORTHO05D004494 1.1e-41 172.9 89 93.3
CAN.G546.56 Capsicum annuum HOM05D003918 ORTHO05D004494 1.4e-41 172.6 89 92.1
Gohir.A07G105200 Gossypium hirsutum HOM05D003918 ORTHO05D004494 1.4e-41 172.6 89 93.3
Gohir.D07G109300 Gossypium hirsutum HOM05D003918 ORTHO05D004494 1.4e-41 172.6 89 93.3
Gorai.001G117400 Gossypium raimondii HOM05D003918 ORTHO05D004494 1.4e-41 172.6 89 93.3
MD03G1128000 Malus domestica HOM05D003918 ORTHO05D004494 1.4e-41 172.6 89 92.1
MD11G1149400 Malus domestica HOM05D003918 ORTHO05D004494 1.4e-41 172.6 89 92.1
Medtr4g057040 Medicago truncatula HOM05D003918 ORTHO05D004494 1.4e-41 172.6 89 92.1
Prupe.6G113800 Prunus persica HOM05D003918 ORTHO05D004494 1.4e-41 172.6 86 95.3
GSVIVG01031454001 Vitis vinifera HOM05D003918 ORTHO05D004494 1.4e-41 172.6 89 93.3
Sc21g0004490 Simmondsia chinensis HOM05D003918 ORTHO05D004494 1.8e-41 172.2 89 92.1
Oeu008363.1 Olea europaea HOM05D003918 ORTHO05D004494 2.4e-41 171.8 88 92.0
Sopen11g026220 Solanum pennellii HOM05D003918 ORTHO05D004494 2.4e-41 171.8 89 92.1
PGSC0003DMG402000458 Solanum tuberosum HOM05D003918 ORTHO05D004494 2.4e-41 171.8 89 92.1
Dinv29385 Davidia involucrata HOM05D003918 ORTHO05D004494 3.1e-41 171.4 90 93.3
Peaxi162Scf00983g00019 Petunia axillaris HOM05D003918 ORTHO05D004494 3.1e-41 171.4 89 92.1
CSS0003214 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 4.1e-41 171.0 89 92.1
CSS0049251 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 4.1e-41 171.0 89 92.1
ClCG02G021690 Citrullus lanatus HOM05D003918 ORTHO05D004494 4.1e-41 171.0 87 93.1
CsaV3_1G014150 Cucumis sativus L. HOM05D003918 ORTHO05D004494 4.1e-41 171.0 89 93.3
Lalb_Chr01g0004631 Lupinus albus HOM05D003918 ORTHO05D004494 4.1e-41 171.0 89 92.1
Psat0ss2518g0280 Pisum sativum HOM05D003918 ORTHO05D004494 4.1e-41 171.0 89 91.0
TAR633G2652 Trochodendron aralioides HOM05D003918 ORTHO05D004494 4.1e-41 171.0 89 92.1
Lj1A213T32 Lonicera japonica HOM05D003918 ORTHO05D004494 5.3e-41 170.6 89 91.0
Rhsim01G0210200 Rhododendron simsii HOM05D003918 ORTHO05D004494 5.3e-41 170.6 89 91.0
Sed0005005 Sechium edule HOM05D003918 ORTHO05D004494 5.3e-41 170.6 85 94.1
Aqoxy1G01058 Aquilegia oxysepala HOM05D003918 ORTHO05D004494 7.0e-41 170.2 86 93.0
Cpa.g.sc47.8 Carica papaya HOM05D003918 ORTHO05D004494 7.0e-41 170.2 89 89.9
MELO3C026958.2 Cucumis melo HOM05D003918 ORTHO05D004494 9.1e-41 169.9 90 92.2
Dinv16240 Davidia involucrata HOM05D003918 ORTHO05D004494 1.5e-40 169.1 84 95.2
Aa31LG5G8120 Aethionema arabicum HOM05D003918 ORTHO05D004494 3.5e-40 167.9 89 91.0
AL4G22250 Arabidopsis lyrata HOM05D003918 ORTHO05D004494 3.5e-40 167.9 82 96.3
Hund00834 Selenicereus undatus HOM05D003918 ORTHO05D004494 3.5e-40 167.9 86 93.0
AT2G27960 Arabidopsis thaliana HOM05D003918 ORTHO05D004494 4.5e-40 167.5 82 95.1
Nn2g13876 Nelumbo nucifera HOM05D003918 ORTHO05D004494 4.5e-40 167.5 89 88.8
Sed0024739 Sechium edule HOM05D003918 ORTHO05D004494 5.9e-40 167.2 86 93.0
TAR369G0366 Trochodendron aralioides HOM05D003918 ORTHO05D004494 5.9e-40 167.2 89 89.9
CAN.G246.3 Capsicum annuum HOM05D003918 ORTHO05D004494 7.7e-40 166.8 88 88.6
FvH4_3g30520 Fragaria vesca HOM05D003918 ORTHO05D004494 7.7e-40 166.8 81 96.3
FAN11G2739 Fragaria x ananassa HOM05D003918 ORTHO05D004494 7.7e-40 166.8 81 96.3
FAN21G0274 Fragaria x ananassa HOM05D003918 ORTHO05D004494 7.7e-40 166.8 81 96.3
Manes.11G152900 Manihot esculenta HOM05D003918 ORTHO05D004494 7.7e-40 166.8 81 96.3
Nitab4.5_0003880g0020 Nicotiana tabacum HOM05D003918 ORTHO05D004494 7.7e-40 166.8 87 92.0
RcHm_v2.0_Chr5g0056481 Rosa chinensis HOM05D003918 ORTHO05D004494 7.7e-40 166.8 81 96.3
PGSC0003DMG400018822 Solanum tuberosum HOM05D003918 ORTHO05D004494 7.7e-40 166.8 89 91.0
TAR623G0966 Trochodendron aralioides HOM05D003918 ORTHO05D004494 7.7e-40 166.8 90 92.2
HPP92_026243 Vanilla planifolia HOM05D003918 ORTHO05D004494 7.7e-40 166.8 81 96.3
AUR62041324 Chenopodium quinoa HOM05D003918 ORTHO05D004494 1.0e-39 166.4 89 91.0
FAN25G0673 Fragaria x ananassa HOM05D003918 ORTHO05D004494 1.0e-39 166.4 81 96.3
vmacro03250 Vaccinium macrocarpon HOM05D003918 ORTHO05D004494 1.0e-39 166.4 82 95.1
CARHR120670 Cardamine hirsuta HOM05D003918 ORTHO05D004494 1.3e-39 166.0 89 89.9
Haze_23526 Corylus avellana HOM05D001217 ORTHO05D001097 1.3e-39 166.0 82 95.1
Actinidia07191 Actinidia chinensis HOM05D001217 ORTHO05D004494 1.7e-39 165.6 81 96.3
DCAR_018757 Daucus carota HOM05D003918 ORTHO05D004494 1.7e-39 165.6 89 89.9
ECA233G3711 Erigeron canadensis HOM05D003918 ORTHO05D004494 1.7e-39 165.6 89 87.6
HanXRQChr11g0346091 Helianthus annuus HOM05D003918 ORTHO05D004494 1.7e-39 165.6 91 89.0
Oeu040442.1 Olea europaea HOM05D003918 ORTHO05D004494 1.7e-39 165.6 87 92.0
EL10Ac9g21015 Beta vulgaris HOM05D003918 ORTHO05D004494 2.2e-39 165.2 86 91.9
Oeu007309.2 Olea europaea HOM05D003918 ORTHO05D004494 2.2e-39 165.2 90 88.9
Sp4g10790 Schrenkiella parvula HOM05D003918 ORTHO05D004494 2.2e-39 165.2 89 89.9
CANSAT64G2716 Cannabis sativa HOM05D003918 ORTHO05D004494 2.9e-39 164.9 81 96.3
Carub.0004s0872 Capsella rubella HOM05D003918 ORTHO05D004494 2.9e-39 164.9 82 95.1
THA.LOC104826394 Tarenaya hassleriana HOM05D003918 ORTHO05D004494 2.9e-39 164.9 89 87.6
Eucgr.B03920 Eucalyptus grandis HOM05D003918 ORTHO05D004494 3.8e-39 164.5 87 89.7
Zm00001eb402980 Zea mays HOM05D003918 ORTHO05D004494 3.8e-39 164.5 86 90.7
Thhalv10017487m.g Eutrema salsugineum HOM05D003918 ORTHO05D004494 5.0e-39 164.1 89 89.9
Oeu007724.1 Olea europaea HOM05D003918 ORTHO05D004494 5.0e-39 164.1 82 95.1
HanXRQChr01g0019451 Helianthus annuus HOM05D003918 ORTHO05D004494 6.5e-39 163.7 91 87.9
Oeu000602.1 Olea europaea HOM05D003918 ORTHO05D004494 6.5e-39 163.7 86 89.5
Lsat_1_v5_gn_1_64981 Lactuca sativa HOM05D003918 ORTHO05D004494 8.5e-39 163.3 90 87.8
Rhsim13G0101600 Rhododendron simsii HOM05D003918 ORTHO05D004494 8.5e-39 163.3 82 93.9
Ah.01g016010 Amaranthus hybridus HOM05D003918 ORTHO05D004494 1.1e-38 162.9 89 87.6
BcaB03g11846 Brassica carinata HOM05D003918 ORTHO05D004494 1.1e-38 162.9 89 86.5
CDE09G0194 Ceratophyllum demersum HOM05D003918 ORTHO05D004494 1.1e-38 162.9 86 88.4
Migut.D02301 Erythranthe guttata HOM05D003918 ORTHO05D004494 1.1e-38 162.9 82 93.9
PSO339G4781 Papaver somniferum HOM05D003918 ORTHO05D004494 1.1e-38 162.9 86 89.5
SalBow6G1569 Salvia bowleyana HOM05D003918 ORTHO05D004494 1.4e-38 162.5 82 92.7
BcaC01g00919 Brassica carinata HOM05D003918 ORTHO05D004494 2.5e-38 161.8 89 87.6
Potri.009G004000 Populus trichocarpa HOM05D003918 ORTHO05D004494 2.5e-38 161.8 80 93.8
ECA248G3596 Erigeron canadensis HOM05D003918 ORTHO05D004494 3.2e-38 161.4 84 90.5
Sabra09G0001700 Salix brachista HOM05D003918 ORTHO05D004494 4.2e-38 161.0 80 93.8
MELO3C004864.2 Cucumis melo HOM05D003918 ORTHO05D004494 5.5e-38 160.6 97 83.5
Hma1.2p1_0772F.1_g215980 Hydrangea macrophylla HOM05D003918 ORTHO05D004494 5.5e-38 160.6 99 81.8
MBI17_g16530_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 5.5e-38 160.6 79 94.9
FAN16G1510 Fragaria x ananassa HOM05D003918 ORTHO05D004494 7.2e-38 160.2 87 89.7
THA.LOC104815736 Tarenaya hassleriana HOM05D003918 ORTHO05D004494 7.2e-38 160.2 82 92.7
A08p17020 Brassica napus HOM05D003918 ORTHO05D004494 9.4e-38 159.8 89 84.3
DCAR_015501 Daucus carota HOM05D003918 ORTHO05D004494 1.2e-37 159.5 82 92.7
Thhalv10017678m.g Eutrema salsugineum HOM05D003918 ORTHO05D004494 2.7e-37 158.3 89 87.6
BraA08t33664Z Brassica rapa HOM05D003918 ORTHO05D004494 3.6e-37 157.9 89 83.1
ATR0043G026 Amborella trichopoda HOM05D003918 ORTHO05D004494 6.1e-37 157.1 83 88.0
Lalb_Chr03g0027731 Lupinus albus HOM05D003918 ORTHO05D004494 6.1e-37 157.1 82 91.5
C03p85930 Brassica napus HOM05D003918 ORTHO05D004494 1.0e-36 156.4 92 84.8
PSO801G0480 Papaver somniferum HOM05D003918 ORTHO05D004494 1.0e-36 156.4 82 86.6
Lsat_1_v5_gn_6_43541 Lactuca sativa HOM05D003918 ORTHO05D004494 1.4e-36 156.0 81 88.9
Os03g0146300 Oryza sativa ssp. japonica HOM05D003918 ORTHO05D004494 1.8e-36 155.6 75 96.0
Carub.0004s0873 Capsella rubella HOM05D003918 ORTHO05D004494 3.9e-36 154.5 89 83.1
SEGI_17224 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 6.7e-36 153.7 78 89.7
AL4G22230 Arabidopsis lyrata HOM05D003918 ORTHO05D004494 8.8e-36 153.3 80 87.5
AT2G27970 Arabidopsis thaliana HOM05D003918 ORTHO05D004494 8.8e-36 153.3 80 87.5
Potri.004G217500 Populus trichocarpa HOM05D003918 ORTHO05D004494 8.8e-36 153.3 78 92.3
Zm00001eb003750 Zea mays HOM05D003918 ORTHO05D004494 8.8e-36 153.3 89 79.8
PGR102G3373 Punica granatum HOM05D003918 ORTHO05D004494 1.5e-35 152.5 76 93.4
CARHR120680 Cardamine hirsuta HOM05D003918 ORTHO05D004494 3.3e-35 151.4 78 88.5
SEGI_19027 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 3.3e-35 151.4 83 83.1
PSO339G2710 Papaver somniferum HOM05D003918 ORTHO05D004494 4.4e-35 151.0 76 89.5
Lalb_Chr19g0136871 Lupinus albus HOM05D003918 ORTHO05D004494 7.4e-35 150.2 75 93.3
SMO116G0276 Selaginella moellendorffii HOM05D003918 ORTHO05D004494 7.4e-35 150.2 83 83.1
Pp3c14_11680 Physcomitrium patens HOM05D003918 ORTHO05D004494 9.7e-35 149.8 83 85.5
Pp3c2_6200 Physcomitrium patens HOM05D003918 ORTHO05D004494 9.7e-35 149.8 83 85.5
Mapoly0001s0011 Marchantia polymorpha HOM05D003918 ORTHO05D004494 2.2e-34 148.7 80 86.2
Glyma.12G083700 Glycine max HOM05D003918 ORTHO05D004494 3.7e-34 147.9 83 88.0
SalBow3G4245 Salvia bowleyana HOM05D003918 ORTHO05D004494 3.7e-34 147.9 77 89.6
Phvul.011G088400 Phaseolus vulgaris HOM05D003918 ORTHO05D004494 6.3e-34 147.1 82 81.7
BcaB06g28178 Brassica carinata HOM05D003918 ORTHO05D004494 1.1e-33 146.4 74 89.2
BcaC02g08219 Brassica carinata HOM05D003918 ORTHO05D004494 2.4e-33 145.2 74 87.8
A04p21230 Brassica napus HOM05D003918 ORTHO05D004494 2.4e-33 145.2 74 87.8
C04p57080 Brassica napus HOM05D003918 ORTHO05D004494 2.4e-33 145.2 74 87.8
BolC4t27242H Brassica oleracea HOM05D003918 ORTHO05D004494 2.4e-33 145.2 74 87.8
Cre03.g180350 Chlamydomonas reinhardtii HOM05D003918 ORTHO05D004494 5.0e-31 137.5 72 84.7
PRCOL_00005401 Prasinoderma coloniale HOM05D003918 ORTHO05D004494 5.0e-31 137.5 81 75.3
MBI16_g13165_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 3.2e-30 134.8 101 68.3
CDE02G4651 Ceratophyllum demersum HOM05D003918 ORTHO05D004494 9.4e-30 133.3 86 80.2
CsaV3_6G014430 Cucumis sativus L. HOM05D003918 ORTHO05D004494 1.6e-29 132.5 73 89.0
MCO11G605 Micromonas commoda HOM05D003918 ORTHO05D004494 2.3e-28 128.6 68 83.8
SMO367G0337 Selaginella moellendorffii HOM05D003918 ORTHO05D004494 3.3e-27 124.8 69 78.3
SEGI_02290 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 1.3e-26 122.9 64 87.5
Zm00001eb012500 Zea mays HOM05D003918 ORTHO05D004494 3.7e-26 121.3 66 86.4
MBI11_g44590_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 2.4e-25 118.6 73 79.5
CBR_g2791 Chara braunii HOM05D003918 ORTHO05D004494 1.6e-24 115.9 60 85.0
BcaB02g10127 Brassica carinata HOM05D003918 ORTHO05D004494 8.8e-20 100.1 77 61.0
Actinidia24153 Actinidia chinensis HOM05D003918 ORTHO05D004494 2.6e-19 98.6 55 87.3
TPR.G31695 Trifolium pratense HOM05D003918 ORTHO05D004494 5.7e-19 97.4 48 95.8
Thecc.08G095400 Theobroma cacao HOM05D003918 ORTHO05D004494 1.4e-17 92.8 66 69.7
ATR0760G002 Amborella trichopoda HOM05D003918 ORTHO05D004494 2.7e-16 88.6 48 87.5
Actinidia03687 Actinidia chinensis HOM05D003918 ORTHO05D004494 5.0e-15 84.3 44 88.6
Zm00001eb191010 Zea mays HOM05D003918 ORTHO05D004494 4.2e-14 81.3 88 51.1
Nn2g10486 Nelumbo nucifera HOM05D003918 ORTHO05D004494 5.5e-14 80.9 38 92.1
AagrBONN_evm.TU.Sc2ySwM_117.701 Anthoceros agrestis HOM05D005424 ORTHO05D006726 3.6e-13 78.2 46 78.3
BcaC05g28675 Brassica carinata HOM05D003918 ORTHO05D004494 8.0e-13 77.0 39 82.1
BolC5t33525H Brassica oleracea HOM05D003918 ORTHO05D004494 8.0e-13 77.0 39 82.1
CSS0021242 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 8.0e-13 77.0 67 62.7
Migut.N02540 Erythranthe guttata HOM05D003918 ORTHO05D004494 1.8e-12 75.9 47 80.9
SGA_v2.0_scaffold50G18575 Striga asiatica HOM05D003918 ORTHO05D004494 4.0e-12 74.7 53 71.7
Nn6g35195 Nelumbo nucifera HOM05D003918 ORTHO05D004494 6.8e-12 73.9 37 94.6
CSS0049200 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 8.9e-12 73.6 59 64.4
Ah.03g143830 Amaranthus hybridus HOM05D003918 ORTHO05D004494 3.4e-11 71.6 38 92.1
Nn4g23314 Nelumbo nucifera HOM05D003918 ORTHO05D004494 9.2e-09 63.5 29 89.7
Gohir.A02G090001 Gossypium hirsutum HOM05D003918 ORTHO05D004494 1.2e-08 63.2 38 81.6
Ah.09g226860 Amaranthus hybridus HOM05D003918 ORTHO05D004494 3.5e-08 61.6 38 84.2
Nn1g02037 Nelumbo nucifera HOM05D003918 ORTHO05D004494 5.9e-08 60.8 51 56.9


User provided reference genes

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