Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14805 Utricularia gibba HOM05D004871 ORTHO05D005755 1.1e-241 839.7 480 100.0
SGA_v2.0_scaffold18G08277 Striga asiatica HOM05D004871 ORTHO05D005755 1.1e-108 397.9 401 56.1
MSTRG.24039 Avicennia marina HOM05D004871 ORTHO05D005755 2.7e-107 393.3 401 55.1
SalBow2G2412 Salvia bowleyana HOM05D004871 ORTHO05D005755 1.0e-101 374.8 399 53.1
Migut.H00077 Erythranthe guttata HOM05D004871 ORTHO05D005755 8.5e-101 371.7 401 52.9
Oeu054623.1 Olea europaea HOM05D004871 ORTHO05D005755 1.9e-100 370.5 408 52.5
CAN.G473.11 Capsicum annuum HOM05D004871 ORTHO05D005755 2.8e-96 356.7 401 52.9
Cc07_g01680 Coffea canephora HOM05D004871 ORTHO05D005755 3.1e-95 353.2 401 51.4
SalBow1G4779 Salvia bowleyana HOM05D004871 ORTHO05D005755 7.0e-95 352.1 400 50.5
PGSC0003DMG400012633 Solanum tuberosum HOM05D004871 ORTHO05D005755 5.0e-93 345.9 399 52.4
Peaxi162Scf00129g00168 Petunia axillaris HOM05D004871 ORTHO05D005755 1.5e-92 344.4 399 51.4
CSS0032397 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 1.9e-92 344.0 401 49.9
Sopen02g031150 Solanum pennellii HOM05D004871 ORTHO05D005755 4.2e-92 342.8 400 52.2
Hma1.2p1_2120F.1_g314420 Hydrangea macrophylla HOM05D004871 ORTHO05D005755 7.2e-92 342.0 405 48.9
Thecc.04G017200 Theobroma cacao HOM05D004871 ORTHO05D005755 5.7e-89 332.4 414 49.0
MD09G1027100 Malus domestica HOM05D004871 ORTHO05D005755 1.7e-88 330.9 414 47.8
RcHm_v2.0_Chr2g0172801 Rosa chinensis HOM05D004871 ORTHO05D005755 6.3e-88 328.9 403 47.9
MD17G1027100 Malus domestica HOM05D004871 ORTHO05D005755 1.1e-87 328.2 412 46.4
DCAR_021722 Daucus carota HOM05D004871 ORTHO05D005755 1.8e-87 327.4 404 46.5
Prupe.3G291600 Prunus persica HOM05D004871 ORTHO05D005755 2.4e-87 327.0 410 47.3
Oeu018139.1 Olea europaea HOM05D004871 ORTHO05D005755 3.1e-87 326.6 408 48.8
Lju41C42T3 Lonicera japonica HOM05D004871 ORTHO05D005755 5.3e-87 325.9 402 48.5
FAN14G1702 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.2e-86 324.7 403 47.1
Peaxi162Scf00129g01652 Petunia axillaris HOM05D004871 ORTHO05D005755 2.7e-86 323.6 392 49.2
FvH4_6g51200 Fragaria vesca HOM05D004871 ORTHO05D005755 5.9e-86 322.4 403 47.1
Duzib147G1217 Durio zibethinus HOM05D004871 ORTHO05D005755 7.7e-86 322.0 415 47.7
FAN02G2556 Fragaria x ananassa HOM05D004871 ORTHO05D005755 7.7e-86 322.0 403 46.9
Gohir.D07G229900 Gossypium hirsutum HOM05D004871 ORTHO05D005755 2.9e-85 320.1 409 47.9
Ciclev10015079m.g Citrus clementina HOM05D004871 ORTHO05D005755 3.8e-85 319.7 418 46.2
Gorai.001G265000 Gossypium raimondii HOM05D004871 ORTHO05D005755 3.8e-85 319.7 409 48.2
Gohir.D04G057500 Gossypium hirsutum HOM05D004871 ORTHO05D005755 5.5e-84 315.8 414 47.1
Gorai.012G064200 Gossypium raimondii HOM05D004871 ORTHO05D005755 5.5e-84 315.8 414 47.1
Cfa007369 Carpinus fangiana HOM05D004871 ORTHO05D005755 1.2e-83 314.7 410 48.0
Lj7C599T13 Lonicera japonica HOM05D004871 ORTHO05D005755 2.7e-83 313.5 426 47.2
Atru.chr6.2393 Acer truncatum HOM05D004871 ORTHO05D005755 3.6e-83 313.2 415 46.0
Haze_14739 Corylus avellana HOM05D004871 ORTHO05D005755 3.6e-83 313.2 416 47.4
Lj1g0007322 Lotus japonicus HOM05D004871 ORTHO05D005755 4.7e-83 312.8 409 45.7
TAR622G0125 Trochodendron aralioides HOM05D004871 ORTHO05D005755 8.0e-83 312.0 410 47.3
Cpa.g.sc130.82 Carica papaya HOM05D004871 ORTHO05D005755 1.4e-82 311.2 414 47.3
Eucgr.J02242 Eucalyptus grandis HOM05D004871 ORTHO05D005755 2.3e-82 310.5 415 46.0
Gohir.A05G355800 Gossypium hirsutum HOM05D004871 ORTHO05D005755 2.3e-82 310.5 414 46.4
QL02p074723 Quercus lobata HOM05D004871 ORTHO05D005755 3.0e-82 310.1 412 46.4
Nn3g16731 Nelumbo nucifera HOM05D004871 ORTHO05D005755 5.2e-82 309.3 427 45.0
Nn3g16736 Nelumbo nucifera HOM05D004871 ORTHO05D005755 5.2e-82 309.3 427 45.0
CiPaw.03G043700 Carya illinoinensis HOM05D004871 ORTHO05D005755 8.8e-82 308.5 409 46.2
ClCG10G013890 Citrullus lanatus HOM05D004871 ORTHO05D005755 1.2e-81 308.1 407 44.0
COL.COLO4_29115 Corchorus olitorius HOM05D004871 ORTHO05D005755 2.6e-81 307.0 411 47.2
MELO3C026581.2 Cucumis melo HOM05D004871 ORTHO05D005755 1.4e-79 301.2 403 43.2
CsaV3_3G042800 Cucumis sativus L. HOM05D004871 ORTHO05D005755 1.4e-79 301.2 403 43.4
CANSAT64G1143 Cannabis sativa HOM05D004871 ORTHO05D005755 4.1e-79 299.7 412 44.9
Sc16g0004350 Simmondsia chinensis HOM05D004871 ORTHO05D005755 1.6e-78 297.7 409 44.7
PSO832G2649 Papaver somniferum HOM05D004871 ORTHO05D005755 2.7e-78 297.0 413 43.1
PSO063G1038 Papaver somniferum HOM05D004871 ORTHO05D005755 5.9e-78 295.8 413 43.1
CiPaw.04G028400 Carya illinoinensis HOM05D004871 ORTHO05D005755 2.2e-77 293.9 412 45.1
vmacro23391 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 6.5e-77 292.4 404 44.6
Medtr7g033720 Medicago truncatula HOM05D004871 ORTHO05D005755 1.5e-76 291.2 399 43.9
Dinv35106 Davidia involucrata HOM05D004871 ORTHO05D005755 3.2e-76 290.0 404 46.3
Glyma.19G068600 Glycine max HOM05D004871 ORTHO05D005755 9.4e-76 288.5 402 44.5
PGR083G0754 Punica granatum HOM05D004871 ORTHO05D005755 2.7e-75 287.0 416 44.0
THA.LOC104825322 Tarenaya hassleriana HOM05D004871 ORTHO05D005755 4.7e-75 286.2 416 43.8
Phvul.008G154600 Phaseolus vulgaris HOM05D004871 ORTHO05D005755 1.8e-74 284.3 401 44.1
Potri.017G069800 Populus trichocarpa HOM05D004871 ORTHO05D005755 8.8e-74 282.0 420 44.0
Rhsim08G0050600 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.5e-73 281.2 431 42.7
Sed0007166 Sechium edule HOM05D004871 ORTHO05D005755 4.4e-73 279.6 405 42.0
Rhsim08G0050100 Rhododendron simsii HOM05D004871 ORTHO05D005755 5.7e-73 279.3 406 44.8
HPP92_009906 Vanilla planifolia HOM05D004871 ORTHO05D005755 1.7e-72 277.7 429 43.4
vmacro18283 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 4.9e-72 276.2 415 43.4
Rhsim08G0050200 Rhododendron simsii HOM05D004871 ORTHO05D005755 6.3e-72 275.8 401 44.1
Eucgr.H01852 Eucalyptus grandis HOM05D004871 ORTHO05D005755 1.4e-71 274.6 419 43.7
vmacro23390 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 1.4e-71 274.6 415 43.1
Sabra17G0062100 Salix brachista HOM05D004871 ORTHO05D005755 2.4e-71 273.9 420 42.9
Zm00001eb246170 Zea mays HOM05D004871 ORTHO05D005755 2.4e-71 273.9 414 44.7
Manes.15G150700 Manihot esculenta HOM05D004871 ORTHO05D005755 3.1e-71 273.5 425 42.1
Ca_23007_v3 Cicer arietinum L. HOM05D004871 ORTHO05D005755 9.2e-71 271.9 415 41.4
Rhsim08G0048900 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.2e-70 271.6 404 43.8
TWI12G0316 Tripterygium wilfordii HOM05D004871 ORTHO05D005755 1.6e-70 271.2 413 42.4
Lalb_Chr14g0362771 Lupinus albus HOM05D004871 ORTHO05D005755 2.3e-69 267.3 404 42.1
Lsat_1_v5_gn_0_47681 Lactuca sativa HOM05D004871 ORTHO05D005755 5.0e-69 266.2 408 41.2
TAR371G0422 Trochodendron aralioides HOM05D004871 ORTHO05D005755 3.3e-68 263.5 406 43.8
Rhsim08G0049600 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.6e-67 261.2 414 43.0
FAN05G1656 Fragaria x ananassa HOM05D004871 ORTHO05D005755 8.0e-67 258.8 354 44.1
TAR371G0152 Trochodendron aralioides HOM05D004871 ORTHO05D005755 1.4e-66 258.1 402 43.3
A04p13500 Brassica napus HOM05D004871 ORTHO05D005755 2.3e-66 257.3 416 41.3
BraA04t17009Z Brassica rapa HOM05D004871 ORTHO05D005755 2.3e-66 257.3 415 41.7
Rhsim08G0049400 Rhododendron simsii HOM05D004871 ORTHO05D005755 6.8e-66 255.8 417 42.4
TAR371G1027 Trochodendron aralioides HOM05D004871 ORTHO05D005755 1.5e-65 254.6 410 40.5
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 1.3e-64 251.5 223 60.1
Lalb_Chr24g0402861 Lupinus albus HOM05D004871 ORTHO05D005755 1.3e-64 251.5 416 41.1
Rhsim08G0050500 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.2e-64 250.8 413 43.1
vmacro18285 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 2.2e-64 250.8 411 39.9
vmacro23392 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 2.2e-64 250.8 411 39.9
CARHR261520 Cardamine hirsuta HOM05D004871 ORTHO05D005755 2.9e-64 250.4 420 41.9
CDE08G0710 Ceratophyllum demersum HOM05D004871 ORTHO05D005755 1.1e-63 248.4 403 42.2
Thhalv10028043m.g Eutrema salsugineum HOM05D004871 ORTHO05D005755 1.8e-63 247.7 423 40.2
C04p47280 Brassica napus HOM05D004871 ORTHO05D005755 5.4e-63 246.1 419 40.8
BolC4t26328H Brassica oleracea HOM05D004871 ORTHO05D005755 5.4e-63 246.1 419 40.8
HanXRQChr17g0548491 Helianthus annuus HOM05D004871 ORTHO05D005755 5.4e-63 246.1 406 39.7
ATR0686G244 Amborella trichopoda HOM05D004871 ORTHO05D005755 4.6e-62 243.0 398 42.7
Aa31LG9G1150 Aethionema arabicum HOM05D004871 ORTHO05D005755 7.8e-62 242.3 434 38.2
Rhsim08G0049300 Rhododendron simsii HOM05D004871 ORTHO05D005755 7.8e-62 242.3 415 38.8
GSVIVG01032408001 Vitis vinifera HOM05D004871 ORTHO05D005755 7.8e-62 242.3 223 57.0
Aqoxy5G03783 Aquilegia oxysepala HOM05D004871 ORTHO05D005755 1.7e-61 241.1 423 38.5
Nitab4.5_0003318g0120 Nicotiana tabacum HOM05D004871 ORTHO05D005755 6.6e-61 239.2 265 53.6
Sp7g01440 Schrenkiella parvula HOM05D004871 ORTHO05D005755 8.6e-61 238.8 429 39.4
AT5G40470 Arabidopsis thaliana HOM05D004871 ORTHO05D005755 1.5e-60 238.0 430 39.3
Nitab4.5_0002468g0010 Nicotiana tabacum HOM05D004871 ORTHO05D005755 1.5e-60 238.0 265 53.2
Glyma.16G071200 Glycine max HOM05D004871 ORTHO05D005755 7.3e-60 235.7 399 39.6
vmacro18284 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 1.6e-59 234.6 284 46.5
Eucgr.L00043 Eucalyptus grandis HOM05D004871 ORTHO05D005755 2.8e-59 233.8 415 39.3
Carub.0007s3511 Capsella rubella HOM05D004871 ORTHO05D005755 3.6e-59 233.4 429 38.7
HanXRQChr15g0475301 Helianthus annuus HOM05D004871 ORTHO05D005755 1.4e-58 231.5 400 37.2
Rhsim08G0049200 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.4e-57 226.9 223 55.6
Atru.chr6.2392 Acer truncatum HOM05D004871 ORTHO05D005755 1.3e-56 224.9 235 52.8
Rhsim08G0050400 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.3e-56 224.9 412 41.3
Gohir.A07G223200 Gossypium hirsutum HOM05D004871 ORTHO05D005755 2.9e-56 223.8 391 39.6
VMungo1383G0924 Vigna mungo HOM05D004871 ORTHO05D005755 5.0e-53 213.0 225 51.6
AL7G49360 Arabidopsis lyrata HOM05D004871 ORTHO05D005755 2.5e-52 210.7 433 37.2
Psat3g166880 Pisum sativum HOM05D004871 ORTHO05D005755 3.3e-52 210.3 236 49.2
Rhsim08G0050000 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.2e-51 208.4 408 36.8
Rhsim08G0049900 Rhododendron simsii HOM05D004871 ORTHO05D005755 6.8e-50 202.6 405 38.3
Cc00_g26710 Coffea canephora HOM05D004871 ORTHO05D005755 9.2e-47 192.2 291 41.9
TAR633G0371 Trochodendron aralioides HOM05D004871 ORTHO05D005755 1.3e-45 188.3 269 44.6
FAN09G0732 Fragaria x ananassa HOM05D000795 ORTHO05D005755 1.1e-44 185.3 178 55.6
Peaxi162Scf00129g01633 Petunia axillaris HOM05D004871 ORTHO05D005755 1.1e-44 185.3 232 49.6
Actinidia35771 Actinidia chinensis HOM05D004871 ORTHO05D005755 1.8e-42 177.9 316 39.9
Nn1g05920 Nelumbo nucifera HOM05D004871 ORTHO05D005755 9.9e-41 172.2 257 42.8
BcaB06g27513 Brassica carinata HOM05D004871 ORTHO05D005755 1.9e-39 167.9 386 35.2
SMO298G0062 Selaginella moellendorffii HOM05D004871 ORTHO05D005755 2.4e-39 167.5 410 33.4
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 6.6e-37 159.5 234 43.6
TAR371G0343 Trochodendron aralioides HOM05D004871 ORTHO05D005755 8.9e-34 149.1 172 51.7
Rhsim08G0050300 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.8e-32 143.7 196 45.9
TAR374G1232 Trochodendron aralioides HOM05D004871 ORTHO05D005755 9.6e-28 129.0 157 49.7
TPR.G1076 Trifolium pratense HOM05D004871 ORTHO05D005755 2.1e-27 127.9 405 29.6
Solyc02g086440.4 Solanum lycopersicum HOM05D004871 ORTHO05D005755 1.5e-25 121.7 194 44.3
CSS0034270 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 2.0e-25 121.3 93 66.7
FAN05G3698 Fragaria x ananassa HOM05D004871 ORTHO05D005755 4.4e-25 120.2 94 63.8
FAN27G1866 Fragaria x ananassa HOM05D004871 ORTHO05D005755 2.7e-22 110.9 115 52.2
BcaB07g32983 Brassica carinata HOM05D004871 ORTHO05D005755 4.6e-22 110.2 119 51.3
FAN09G0037 Fragaria x ananassa HOM05D004871 ORTHO05D005755 5.6e-20 103.2 95 58.9
CSS0039002 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 9.6e-20 102.4 79 67.1
ATR0589G064 Amborella trichopoda HOM05D004871 ORTHO05D005755 3.6e-19 100.5 312 30.4
TAR629G3424 Trochodendron aralioides HOM05D004871 ORTHO05D005755 2.6e-17 94.4 124 48.4
ATR0762G040 Amborella trichopoda HOM05D004871 ORTHO05D005755 1.9e-15 88.2 262 30.9
FAN05G3297 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.9e-15 88.2 90 55.6
Nitab4.5_0007441g0020 Nicotiana tabacum HOM05D004871 ORTHO05D005755 2.4e-15 87.8 126 43.7
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 7.1e-15 86.3 99 44.4
CSS0033026 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 2.7e-14 84.3 65 66.2
TAR314G0001 Trochodendron aralioides HOM05D004871 ORTHO05D005755 1.8e-13 81.6 120 37.5
FAN14G0631 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.6e-11 75.1 60 63.3
HanXRQChr07g0188231 Helianthus annuus HOM05D004871 ORTHO05D005755 1.7e-08 65.1 79 43.0
TAR314G0006 Trochodendron aralioides HOM05D004871 ORTHO05D005755 1.2e-06 58.9 95 33.7
SalBow5G5277 Salvia bowleyana HOM05D001905 ORTHO05D001820 2.1e-06 58.2 275 27.6
SalBow5G3486 Salvia bowleyana HOM05D001905 ORTHO05D001820 3.5e-06 57.4 275 27.6


User provided reference genes

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