Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_87.g28026 Utricularia gibba HOM05D003517 ORTHO05D009798 4.6e-109 397.9 201 100.0
SGA_v2.0_scaffold420G51390 Striga asiatica HOM05D003517 ORTHO05D009798 1.5e-78 296.6 195 80.0
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 6.8e-68 261.2 198 71.7
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 1.7e-66 256.5 197 72.1
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 1.8e-65 253.1 197 71.1
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 4.1e-65 251.9 198 70.2
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 4.1e-65 251.9 198 70.2
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 9.1e-65 250.8 198 70.2
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 3.5e-64 248.8 199 69.8
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 3.5e-64 248.8 199 69.8
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 5.0e-63 245.0 198 68.7
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 5.0e-63 245.0 201 68.2
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 8.6e-63 244.2 201 69.7
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 1.9e-62 243.0 199 68.3
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 3.3e-62 242.3 196 69.4
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 4.2e-62 241.9 202 68.3
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 6.1e-61 238.0 199 67.3
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 3.0e-60 235.7 199 66.8
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 6.8e-60 234.6 198 65.7
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 8.9e-60 234.2 198 66.2
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 2.0e-59 233.0 200 68.0
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 2.0e-59 233.0 200 68.0
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 2.0e-59 233.0 200 68.0
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 4.4e-59 231.9 200 67.5
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 4.4e-59 231.9 200 67.5
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 5.7e-59 231.5 193 67.9
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 7.5e-59 231.1 200 68.0
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 3.7e-58 228.8 201 65.2
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 8.3e-58 227.6 179 71.5
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 1.6e-56 223.4 201 66.2
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 1.0e-55 220.7 199 62.3
TPR.G36113 Trifolium pratense HOM05D003517 ORTHO05D009798 2.8e-53 212.6 169 69.2
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 7.8e-48 194.5 198 56.1
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 5.0e-47 191.8 184 60.9
Sp3g25550 Schrenkiella parvula HOM05D003517 ORTHO05D009798 5.0e-47 191.8 170 67.1
Nitab4.5_0000172g2130 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.2e-45 187.2 159 65.4
SHI35305 Sapria himalayana HOM05D003517 ORTHO05D009798 1.6e-45 186.8 198 57.1
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 2.1e-45 186.4 178 61.8
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 2.1e-45 186.4 178 61.8
Oeu013683.1 Olea europaea HOM05D003517 ORTHO05D009798 4.7e-45 185.3 186 56.5
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 1.2e-43 180.6 178 60.7
Zm00001eb438110 Zea mays HOM05D003517 ORTHO05D009798 2.6e-43 179.5 165 60.6
Zm00001eb438970 Zea mays HOM05D003517 ORTHO05D009798 2.6e-43 179.5 165 60.6
Zm00001eb439050 Zea mays HOM05D003517 ORTHO05D009798 2.6e-43 179.5 165 60.6
Zm00001eb440630 Zea mays HOM05D003517 ORTHO05D009798 2.6e-43 179.5 165 60.6
Nitab4.5_0003945g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 9.8e-43 177.6 161 64.0
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 8.1e-37 157.9 168 58.3
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 5.6e-30 135.2 163 49.1
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 3.6e-29 132.5 147 55.1
Solyc10g045740.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 4.2e-25 119.0 80 70.0
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 3.9e-23 112.5 82 72.0
Nitab4.5_0001152g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009794 7.3e-22 108.2 132 52.3
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 2.6e-19 99.8 75 72.0
Nitab4.5_0001152g0480 Nicotiana tabacum HOM05D003517 ORTHO05D009798 7.6e-19 98.2 60 76.7
SEGI_36410 Sequoiadendron giganteum HOM05D003517 ORTHO05D009798 2.9e-18 96.3 181 42.5
BraSC48t46337Z Brassica rapa HOM05D003517 ORTHO05D009798 6.4e-18 95.1 89 67.4
Nitab4.5_0001152g1080 Nicotiana tabacum HOM05D003517 ORTHO05D009798 6.4e-18 95.1 81 66.7
PSO339G1469 Papaver somniferum HOM05D003517 ORTHO05D009798 7.8e-16 88.2 108 48.1
PSO513G0171 Papaver somniferum HOM05D003517 ORTHO05D009798 2.3e-15 86.7 119 43.7
CAN.G85.23 Capsicum annuum HOM05D003517 ORTHO05D009798 1.5e-14 84.0 61 75.4
Solyc11g030935.1 Solanum lycopersicum HOM05D003517 ORTHO05D009798 3.3e-14 82.8 121 47.9
PSO063G7170 Papaver somniferum HOM05D003517 ORTHO05D009798 4.5e-11 72.4 70 58.6
PSO585G0042 Papaver somniferum HOM05D003517 ORTHO05D009798 2.2e-10 70.1 70 57.1
Medtr0030s0090 Medicago truncatula HOM05D003517 ORTHO05D009798 4.9e-10 68.9 36 86.1
Dinv18903 Davidia involucrata HOM05D003517 ORTHO05D009798 1.4e-09 67.4 50 74.0
Lalb_Chr22g0353791 Lupinus albus HOM05D003517 ORTHO05D009798 4.2e-09 65.9 43 72.1
PGSC0003DMG400033608 Solanum tuberosum HOM05D003517 ORTHO05D009798 1.3e-07 60.8 64 54.7
Nitab4.5_0008059g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 5.1e-07 58.9 47 70.2
CARHR287140 Cardamine hirsuta HOM05D003517 ORTHO05D009798 6.7e-07 58.5 39 74.4


User provided reference genes

Program Settings