Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_87.g27965 Utricularia gibba HOM05D003467 ORTHO05D004220 6.1e-177 624.0 310 100.0
SGA_v2.0_scaffold255G45505 Striga asiatica HOM05D003467 ORTHO05D004220 4.8e-129 464.9 310 80.3
CANSAT16G0031 Cannabis sativa HOM05D003467 ORTHO05D004220 2.7e-124 449.1 323 77.1
Solyc00g500228.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 2.1e-121 439.5 324 77.5
Lj2C1229G12 Lonicera japonica HOM05D003467 ORTHO05D004220 2.1e-116 422.9 294 78.9
ClCG11G007180 Citrullus lanatus HOM05D003467 ORTHO05D004220 2.8e-113 412.5 291 77.3
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 2.4e-112 409.5 293 77.1
Nn1g10002 Nelumbo nucifera HOM05D003467 ORTHO05D004220 1.5e-111 406.8 291 77.3
Actinidia34926 Actinidia chinensis HOM05D003467 ORTHO05D004220 1.7e-110 403.3 294 76.5
Rhsim07G0055600 Rhododendron simsii HOM05D003467 ORTHO05D004220 1.9e-109 399.8 320 71.6
ATMG00560 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 1.3e-107 393.7 327 70.0
Dinv06674 Davidia involucrata HOM05D003467 ORTHO05D004220 1.1e-106 390.6 269 79.9
BcaC08g43711 Brassica carinata HOM05D003467 ORTHO05D004220 5.7e-106 388.3 328 69.5
Sed0025530 Sechium edule HOM05D003467 ORTHO05D004220 1.3e-102 377.1 293 73.0
SabraMtG0006300 Salix brachista HOM05D003467 ORTHO05D004220 8.5e-102 374.4 288 74.3
CsaV3_UNG208190 Cucumis sativus L. HOM05D003467 ORTHO05D004220 1.9e-101 373.2 294 72.4
Solyc00g500103.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 1.3e-99 367.1 268 77.6
MBI16_g09480_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 2.3e-99 366.3 304 67.8
CARHR282930 Cardamine hirsuta HOM05D003467 ORTHO05D004220 4.5e-95 352.1 297 69.0
BNapus_Darmor_BZH_scaffold_234p00200 Brassica napus HOM05D003467 ORTHO05D004220 1.4e-93 347.1 297 68.4
BolSC28t60347H Brassica oleracea HOM05D003467 ORTHO05D004220 1.4e-93 347.1 297 68.4
BraSC48t46273Z Brassica rapa HOM05D003467 ORTHO05D004220 1.4e-93 347.1 297 68.4
Sp3g25530 Schrenkiella parvula HOM05D003467 ORTHO05D004220 1.4e-93 347.1 297 68.4
AT2G07715 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 3.2e-93 345.9 297 68.4
AL3G44370 Arabidopsis lyrata HOM05D003467 ORTHO05D004220 4.2e-93 345.5 297 68.4
Aa31csc239G20 Aethionema arabicum HOM05D003467 ORTHO05D004220 2.6e-90 336.3 298 67.1
SHI53305 Sapria himalayana HOM05D003467 ORTHO05D004220 2.8e-89 332.8 294 67.0
Nitab4.5_0004471g0080 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.2e-87 327.4 291 67.4
SHI36699 Sapria himalayana HOM05D003467 ORTHO05D004220 1.7e-86 323.6 282 67.7
Thhalv10013769m.g Eutrema salsugineum HOM05D003467 ORTHO05D004220 5.5e-85 318.5 279 67.0
Peaxi162Scf00507g00009 Petunia axillaris HOM05D003467 ORTHO05D004220 1.6e-84 317.0 289 65.4
SHI40343 Sapria himalayana HOM05D003467 ORTHO05D004220 1.6e-84 317.0 279 67.0
SHI37961 Sapria himalayana HOM05D003467 ORTHO05D004220 6.1e-84 315.1 279 66.7
Nitab4.5_0009709g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 6.7e-83 311.6 293 63.8
Ciclev10005397m.g Citrus clementina HOM05D003467 ORTHO05D004220 8.8e-83 311.2 333 58.6
BolC4t23495H Brassica oleracea HOM05D003467 ORTHO05D004220 3.7e-81 305.8 240 72.9
SHI51351 Sapria himalayana HOM05D003467 ORTHO05D004220 5.9e-79 298.5 274 63.9
SHI37556 Sapria himalayana HOM05D003467 ORTHO05D004220 1.3e-78 297.4 265 64.9
SHI53641 Sapria himalayana HOM05D003467 ORTHO05D004220 1.2e-74 284.3 266 62.4
SHI52927 Sapria himalayana HOM05D003467 ORTHO05D004220 2.0e-74 283.5 281 62.3
SHI38317 Sapria himalayana HOM05D003467 ORTHO05D004220 5.7e-74 282.0 277 61.7
CAN.G502.14 Capsicum annuum HOM05D003467 ORTHO05D004220 7.5e-74 281.6 253 64.8
Nitab4.5_0001796g0090 Nicotiana tabacum HOM05D003467 ORTHO05D004220 7.5e-74 281.6 246 67.9
Peaxi162Scf00197g00034 Petunia axillaris HOM05D003467 ORTHO05D004220 7.5e-74 281.6 291 60.8
SHI46915 Sapria himalayana HOM05D003467 ORTHO05D004220 8.2e-73 278.1 294 57.8
SHI37886 Sapria himalayana HOM05D003467 ORTHO05D004220 2.9e-70 269.6 265 60.0
PGSC0003DMG401008792 Solanum tuberosum HOM05D003467 ORTHO05D004220 5.0e-70 268.9 221 71.5
CDE02G2877 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 8.5e-70 268.1 451 43.2
SHI37866 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-69 267.7 266 61.7
SHI52008 Sapria himalayana HOM05D003467 ORTHO05D004220 1.9e-69 266.9 238 64.3
Aqoxy4G00639 Aquilegia oxysepala HOM05D003467 ORTHO05D004220 8.0e-68 261.5 242 59.9
SHI42055 Sapria himalayana HOM05D003467 ORTHO05D004220 1.8e-67 260.4 244 63.5
Sopen05g012590 Solanum pennellii HOM05D003467 ORTHO05D004220 2.3e-67 260.0 191 75.9
SHI37209 Sapria himalayana HOM05D003467 ORTHO05D004220 4.0e-67 259.2 266 57.5
Nitab4.5_0009703g0010 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.5e-66 257.3 202 73.3
Nitab4.5_0001152g0330 Nicotiana tabacum HOM05D003467 ORTHO05D004220 5.4e-64 248.8 295 55.3
COL.COLO4_18957 Corchorus olitorius HOM05D003467 ORTHO05D004220 1.2e-63 247.7 313 52.7
SHI38192 Sapria himalayana HOM05D003467 ORTHO05D004220 2.0e-63 246.9 244 60.2
CAN.G134.20 Capsicum annuum HOM05D003467 ORTHO05D004220 6.5e-62 241.9 194 69.1
SHI52601 Sapria himalayana HOM05D003467 ORTHO05D004220 9.5e-61 238.0 236 59.7
HanXRQChr14g0459301 Helianthus annuus HOM05D003467 ORTHO05D004220 8.0e-60 235.0 301 47.2
SHI38047 Sapria himalayana HOM05D003467 ORTHO05D004220 2.3e-59 233.4 284 52.5
SHI37879 Sapria himalayana HOM05D003467 ORTHO05D004220 6.8e-59 231.9 246 58.1
SHI50250 Sapria himalayana HOM05D003467 ORTHO05D004220 1.2e-58 231.1 197 67.5
Lsat_1_v5_gn_6_32340 Lactuca sativa HOM05D003467 ORTHO05D004220 9.8e-58 228.0 308 45.5
SHI38898 Sapria himalayana HOM05D003467 ORTHO05D004220 2.2e-57 226.9 263 55.1
Manes.02G141800 Manihot esculenta HOM05D003467 ORTHO05D004220 3.7e-57 226.1 261 52.1
SHI52974 Sapria himalayana HOM05D003467 ORTHO05D004220 2.4e-56 223.4 213 62.4
Migut.N03022 Erythranthe guttata HOM05D003467 ORTHO05D004220 9.2e-56 221.5 320 50.9
BcaC05g26882 Brassica carinata HOM05D003467 ORTHO05D004220 5.0e-54 215.7 267 55.1
SalBow7G2519 Salvia bowleyana HOM05D003467 ORTHO05D004220 9.5e-53 211.5 309 47.9
SalBow7G4829 Salvia bowleyana HOM05D003467 ORTHO05D004220 9.5e-53 211.5 309 47.9
Oeu039080.1 Olea europaea HOM05D003467 ORTHO05D004220 1.2e-52 211.1 158 77.2
Sc16g0002730 Simmondsia chinensis HOM05D003467 ORTHO05D004220 1.6e-52 210.7 299 46.5
SHI52904 Sapria himalayana HOM05D003467 ORTHO05D004220 4.7e-52 209.1 244 54.1
SalBow1G2953 Salvia bowleyana HOM05D003467 ORTHO05D004220 5.2e-51 205.7 309 46.9
SHI36967 Sapria himalayana HOM05D003467 ORTHO05D004220 2.2e-49 200.3 165 68.5
Sopen06g007650 Solanum pennellii HOM05D003467 ORTHO05D004220 8.3e-49 198.4 167 68.9
MBI05_g05352_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 1.8e-48 197.2 179 62.0
SHI48358 Sapria himalayana HOM05D003467 ORTHO05D004220 1.8e-48 197.2 218 56.0
EL10Ac6g15561 Beta vulgaris HOM05D003467 ORTHO05D004220 2.0e-47 193.7 297 45.1
Lsat_1_v5_gn_1_109980 Lactuca sativa HOM05D003467 ORTHO05D004220 2.3e-46 190.3 291 42.6
SHI36996 Sapria himalayana HOM05D003467 ORTHO05D004220 2.3e-46 190.3 165 67.3
SalBow1G6425 Salvia bowleyana HOM05D003467 ORTHO05D004220 3.0e-46 189.9 284 46.5
Hund13975 Selenicereus undatus HOM05D003467 ORTHO05D004220 3.9e-46 189.5 298 44.0
Sed0002506 Sechium edule HOM05D003467 ORTHO05D004220 1.9e-45 187.2 201 57.7
SHI43968 Sapria himalayana HOM05D003467 ORTHO05D004220 9.5e-45 184.9 150 68.7
BcaC05g26874 Brassica carinata HOM05D003467 ORTHO05D004220 1.2e-44 184.5 255 51.8
SHI36997 Sapria himalayana HOM05D003467 ORTHO05D004220 3.1e-43 179.9 127 76.4
CAN.G1.25 Capsicum annuum HOM05D003467 ORTHO05D004220 1.7e-41 174.1 155 67.1
Nitab4.5_0006602g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 6.4e-41 172.2 229 51.1
Zm00001eb180350 Zea mays HOM05D000540 ORTHO05D000681 1.4e-40 171.0 312 39.4
SHI52074 Sapria himalayana HOM05D003467 ORTHO05D004220 3.2e-40 169.9 232 50.0
SHI51177 Sapria himalayana HOM05D003467 ORTHO05D004220 7.0e-40 168.7 241 47.3
Lsat_1_v5_gn_2_118881 Lactuca sativa HOM05D003467 ORTHO05D004220 9.2e-40 168.3 284 39.8
SHI38786 Sapria himalayana HOM05D003467 ORTHO05D004220 1.6e-39 167.5 133 71.4
Ah.04g149890 Amaranthus hybridus HOM05D003467 ORTHO05D004220 4.6e-39 166.0 285 41.1
Manes.01G181900 Manihot esculenta HOM05D003467 ORTHO05D004220 1.0e-38 164.9 194 52.6
SGA_v2.0_scaffold507G52535 Striga asiatica HOM05D003467 ORTHO05D004220 5.0e-38 162.5 165 59.4
SHI47986 Sapria himalayana HOM05D003467 ORTHO05D004220 4.3e-37 159.5 156 59.6
BolC9t55063H Brassica oleracea HOM05D003467 ORTHO05D004220 3.6e-36 156.4 160 58.1
CARHR288290 Cardamine hirsuta HOM05D003467 ORTHO05D004220 4.0e-35 152.9 137 65.7
SHI38985 Sapria himalayana HOM05D003467 ORTHO05D004220 6.8e-35 152.1 201 48.8
C09p21580 Brassica napus HOM05D003467 ORTHO05D004220 3.4e-34 149.8 159 57.9
Atru.chr10.2291 Acer truncatum HOM05D003467 ORTHO05D004220 2.9e-33 146.7 235 46.4
Nitab4.5_0002635g0050 Nicotiana tabacum HOM05D003467 ORTHO05D004220 3.7e-33 146.4 130 67.7
Nitab4.5_0012067g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 4.9e-33 146.0 281 42.3
ECA238G4840 Erigeron canadensis HOM05D000460 ORTHO05D000333 8.3e-33 145.2 282 39.0
Glyma.08G365200 Glycine max HOM05D003467 ORTHO05D004220 8.3e-33 145.2 243 43.6
ATR0661G353 Amborella trichopoda HOM05D003467 ORTHO05D004220 2.4e-32 143.7 292 38.0
ATR0660G011 Amborella trichopoda HOM05D003467 ORTHO05D004220 5.4e-32 142.5 111 69.4
Phvul.008G005400 Phaseolus vulgaris HOM05D003467 ORTHO05D004220 9.2e-32 141.7 245 43.7
CAN.G1572.11 Capsicum annuum HOM05D003467 ORTHO05D004220 1.2e-31 141.4 111 70.3
CAN.G2141.7 Capsicum annuum HOM05D003467 ORTHO05D004220 1.2e-31 141.4 111 70.3
Glyma.07G149151 Glycine max HOM05D003467 ORTHO05D004220 2.1e-31 140.6 243 42.0
SHI44577 Sapria himalayana HOM05D003467 ORTHO05D004220 3.5e-31 139.8 101 74.3
Ca_04056_v3 Cicer arietinum L. HOM05D003467 ORTHO05D004220 4.6e-31 139.4 248 41.1
BraSC77t46654Z Brassica rapa HOM05D003467 ORTHO05D004220 6.0e-31 139.0 174 54.0
Lalb_Chr04g0257431 Lupinus albus HOM05D003467 ORTHO05D004220 6.0e-31 139.0 236 41.9
CAN.G267.15 Capsicum annuum HOM05D003467 ORTHO05D004220 5.1e-30 136.0 96 77.1
VMungo1383G2739 Vigna mungo HOM05D003467 ORTHO05D004220 4.3e-29 132.9 247 40.5
AUR62004052 Chenopodium quinoa HOM05D003467 ORTHO05D004220 5.6e-29 132.5 261 37.9
AUR62007567 Chenopodium quinoa HOM05D003467 ORTHO05D004220 7.3e-29 132.1 261 37.9
SHI34611 Sapria himalayana HOM05D003467 ORTHO05D004220 6.2e-28 129.0 121 60.3
SGA_v2.0_scaffold361G49910 Striga asiatica HOM05D003467 ORTHO05D004220 6.2e-28 129.0 91 76.9
Lsat_1_v5_gn_4_83901 Lactuca sativa HOM05D003467 ORTHO05D004220 8.1e-28 128.6 221 41.6
SalBow1G5399 Salvia bowleyana HOM05D003467 ORTHO05D004220 6.8e-27 125.6 180 47.2
Lsat_1_v5_gn_7_88480 Lactuca sativa HOM05D003467 ORTHO05D004220 1.2e-26 124.8 228 40.4
SHI54334 Sapria himalayana HOM05D003467 ORTHO05D004220 7.6e-26 122.1 112 61.6
Lsat_1_v5_gn_5_163900 Lactuca sativa HOM05D003467 ORTHO05D004220 1.3e-25 121.3 171 46.8
SEGI_40930 Sequoiadendron giganteum HOM05D000540 ORTHO05D000681 1.3e-25 121.3 310 31.3
Lsat_1_v5_gn_8_11861 Lactuca sativa HOM05D003467 ORTHO05D004220 2.2e-25 120.6 236 37.3
SHI42501 Sapria himalayana HOM05D003467 ORTHO05D004220 3.8e-25 119.8 150 53.3
Medtr7g007070 Medicago truncatula HOM05D003467 ORTHO05D004220 8.4e-25 118.6 234 39.7
SHI44578 Sapria himalayana HOM05D003467 ORTHO05D004220 8.4e-25 118.6 85 71.8
CDE02G4335 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 1.1e-24 118.2 218 44.5
SHI43969 Sapria himalayana HOM05D003467 ORTHO05D004220 2.4e-24 117.1 90 68.9
Psat3g204920 Pisum sativum HOM05D003467 ORTHO05D004220 9.2e-24 115.2 197 45.7
Lsat_1_v5_gn_3_81380 Lactuca sativa HOM05D003467 ORTHO05D004220 3.5e-23 113.2 122 54.1
unitig_22.g5752 Utricularia gibba HOM05D003467 ORTHO05D004220 1.0e-22 111.7 68 80.9
SHI42502 Sapria himalayana HOM05D003467 ORTHO05D004220 3.9e-22 109.8 91 69.2
Lj1g0022622 Lotus japonicus HOM05D003467 ORTHO05D004220 5.1e-22 109.4 237 35.4
SHI38986 Sapria himalayana HOM05D003467 ORTHO05D004220 6.6e-22 109.0 86 67.4
Lsat_1_v5_gn_1_70701 Lactuca sativa HOM05D003467 ORTHO05D004220 1.2e-20 104.8 109 56.0
Nitab4.5_0004300g0280 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.8e-19 100.9 97 60.8
Solyc08g022180.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 3.1e-19 100.1 95 60.0
Lsat_1_v5_gn_9_41861 Lactuca sativa HOM05D003467 ORTHO05D004220 9.0e-19 98.6 172 44.8
Lsat_1_v5_gn_5_28101 Lactuca sativa HOM05D003467 ORTHO05D004220 1.5e-18 97.8 286 31.8
Lsat_1_v5_gn_5_114100 Lactuca sativa HOM05D003467 ORTHO05D004220 2.0e-18 97.4 152 41.4
Lsat_1_v5_gn_3_78181 Lactuca sativa HOM05D003467 ORTHO05D004220 2.6e-18 97.1 125 45.6
SHI04750 Sapria himalayana HOM05D000330 ORTHO05D000209 7.6e-18 95.5 188 38.3
SHI34612 Sapria himalayana HOM05D003467 ORTHO05D004220 1.7e-17 94.4 70 71.4
SHI37826 Sapria himalayana HOM05D003467 ORTHO05D004220 1.7e-17 94.4 76 65.8
Lsat_1_v5_gn_3_11941 Lactuca sativa HOM05D003467 ORTHO05D004220 6.4e-17 92.4 73 65.8
Solyc02g092280.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 8.4e-17 92.0 72 65.3
Lsat_1_v5_gn_7_5320 Lactuca sativa HOM05D003467 ORTHO05D004220 1.9e-16 90.9 89 55.1
SHI34617 Sapria himalayana HOM05D003467 ORTHO05D004220 3.2e-16 90.1 57 84.2
CAN.G676.26 Capsicum annuum HOM05D003467 ORTHO05D004220 2.1e-15 87.4 92 54.3
Lsat_1_v5_gn_4_71160 Lactuca sativa HOM05D003467 ORTHO05D004220 4.6e-15 86.3 96 52.1
Nitab4.5_0002558g0130 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.3e-14 84.0 52 84.6
SalBow1G8419 Salvia bowleyana HOM05D003467 ORTHO05D004220 2.3e-14 84.0 204 35.3
Atru.chr10.2290 Acer truncatum HOM05D003467 ORTHO05D004220 1.8e-11 74.3 52 76.9
MCO06G213 Micromonas commoda HOM05D000540 ORTHO05D000681 2.6e-10 70.5 106 44.3
Nitab4.5_0008578g0020 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.7e-09 67.8 60 65.0
SGA_v2.0_scaffold48G17845 Striga asiatica HOM05D003467 ORTHO05D004220 2.2e-09 67.4 56 64.3
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 2.9e-09 67.0 50 68.0
CAN.G76.4 Capsicum annuum HOM05D003467 ORTHO05D004220 3.8e-09 66.6 62 58.1
Nitab4.5_0000978g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 3.8e-09 66.6 50 70.0
SHI54720 Sapria himalayana HOM05D003467 ORTHO05D004220 3.2e-08 63.5 46 78.3
ATR0660G010 Amborella trichopoda HOM05D003467 ORTHO05D004220 5.4e-08 62.8 43 74.4
CAN.G1447.9 Capsicum annuum HOM05D003467 ORTHO05D004220 7.1e-08 62.4 47 68.1
SHI27341 Sapria himalayana HOM05D003467 ORTHO05D004220 7.1e-08 62.4 44 75.0
Haze_26884 Corylus avellana HOM05D000540 ORTHO05D000681 3.5e-07 60.1 69 46.4
MELO3C032707.2 Cucumis melo HOM05D000263 ORTHO05D000213 6.0e-07 59.3 46 67.4
CAN.G993.9 Capsicum annuum HOM05D003467 ORTHO05D008105 2.3e-06 57.4 38 81.6
arahy.Tifrunner.gnm1.ann1.F19KU9 Arachis hypogaea HOM05D003467 ORTHO05D004220 3.9e-06 56.6 229 27.9


User provided reference genes

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