Gene: ATMG00560
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier ATMG00560
- Transcript Identifier ATMG00560.1
- Gene Type Coding gene
- Location ChrM : 154744-157345 : positive
Gene Family Information
- ID HOM05D003467
- #Genes/#Species 196/59
- Phylogenetic origin
- ID ORTHO05D004220
- #Genes/#Species 187/59
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid ATMG00560.1
- symbol RPL2
- uniprot P93311
Descriptions
- Description Nucleic acid-binding, OB-fold-like protein
- Computational description RPL2; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G07715.1).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006412 | TAS | Gene Ontology | translation | |
| GO:0006412 | IEA | InterPro | translation | |
| GO:0032543 | IBA | Gene Ontology | mitochondrial translation | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003735 | IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IBA TAS | Gene Ontology | structural constituent of ribosome | 1 |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0003729 | IDA | GOA Database | mRNA binding | |
| GO:0003729 | HDA | Gene Ontology | mRNA binding | 2 |
| GO:0003723 | IBA | Gene Ontology | RNA binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0005739 | ISM TAS | Gene Ontology | mitochondrion | 3 |
| GO:0005762 | IBA TAS | Gene Ontology | mitochondrial large ribosomal subunit | 1 3 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.7.1.1.2 | Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL2-N-terminal |