Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_85.g27314 Utricularia gibba HOM05D003806 ORTHO05D004346 2.1e-149 533.1 451 100.0
Migut.M00098 Erythranthe guttata HOM05D003806 ORTHO05D004346 4.6e-48 196.4 557 44.7
MSTRG.6602 Avicennia marina HOM05D003806 ORTHO05D004346 3.0e-47 193.7 556 46.8
MSTRG.14879 Avicennia marina HOM05D003806 ORTHO05D004346 5.1e-39 166.4 550 35.5
SalBow7G1206 Salvia bowleyana HOM05D003806 ORTHO05D004346 3.7e-29 133.7 517 43.9
unitig_8.g4605 Utricularia gibba HOM05D001005 ORTHO05D000836 6.2e-29 132.9 447 34.9
Hma1.2p1_0401F.1_g144710 Hydrangea macrophylla HOM05D003806 ORTHO05D004346 6.9e-28 129.4 562 28.1
Peaxi162Scf00393g00413 Petunia axillaris HOM05D003806 ORTHO05D004346 6.5e-26 122.9 563 27.9
Lj1A1039T31 Lonicera japonica HOM05D003806 ORTHO05D004346 7.9e-24 115.9 578 37.2
Cc05_g00050 Coffea canephora HOM05D003806 ORTHO05D004346 1.0e-23 115.5 460 27.6
Duzib138G1777 Durio zibethinus HOM05D003806 ORTHO05D004346 2.3e-23 114.4 560 25.2
Medtr4g076030 Medicago truncatula HOM05D003806 ORTHO05D004346 3.9e-23 113.6 468 28.8
SGA_v2.0_scaffold73G24430 Striga asiatica HOM05D003806 ORTHO05D004346 3.9e-23 113.6 469 31.6
Sabra16G0025500 Salix brachista HOM05D003806 ORTHO05D004346 6.7e-23 112.8 561 31.7
Sabra16G0020700 Salix brachista HOM05D003806 ORTHO05D004346 1.1e-22 112.1 561 27.1
PGSC0003DMG400011753 Solanum tuberosum HOM05D003806 ORTHO05D004346 1.5e-22 111.7 563 25.2
Eucgr.A00904 Eucalyptus grandis HOM05D003806 ORTHO05D004346 3.3e-22 110.5 430 25.8
Nitab4.5_0002232g0030 Nicotiana tabacum HOM05D003806 ORTHO05D004346 3.3e-22 110.5 560 33.6
TWI34G1284 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 9.6e-22 109.0 561 25.5
Nitab4.5_0000170g0440 Nicotiana tabacum HOM05D003806 ORTHO05D004346 1.6e-21 108.2 559 29.3
SGA_v2.0_scaffold181G39737 Striga asiatica HOM05D003806 ORTHO05D004346 1.6e-21 108.2 196 42.3
Dinv09877 Davidia involucrata HOM05D003806 ORTHO05D004346 3.7e-21 107.1 613 26.8
arahy.Tifrunner.gnm1.ann1.LI5V6E Arachis hypogaea HOM05D003806 ORTHO05D004346 8.2e-21 105.9 483 25.9
DCAR_009841 Daucus carota HOM05D003806 ORTHO05D004346 1.4e-20 105.1 99 60.6
Prupe.3G186800 Prunus persica HOM05D003806 ORTHO05D004346 1.8e-20 104.8 481 26.6
MD17G1128600 Malus domestica HOM05D003806 ORTHO05D004346 3.1e-20 104.0 477 26.2
GSVIVG01015817001 Vitis vinifera HOM05D003806 ORTHO05D004346 6.9e-20 102.8 619 24.7
arahy.Tifrunner.gnm1.ann1.TP1CMR Arachis hypogaea HOM05D003806 ORTHO05D004346 2.0e-19 101.3 483 25.5
Dinv08951 Davidia involucrata HOM05D003806 ORTHO05D004346 3.4e-19 100.5 101 56.4
MD09G1138500 Malus domestica HOM05D003806 ORTHO05D004346 4.5e-19 100.1 482 25.7
CiPaw.03G113300 Carya illinoinensis HOM05D003806 ORTHO05D004346 5.8e-19 99.8 479 25.3
Glyma.11G096400 Glycine max HOM05D003806 ORTHO05D004346 5.8e-19 99.8 490 24.9
Cfa023525 Carpinus fangiana HOM05D003806 ORTHO05D004346 7.6e-19 99.4 617 29.2
VMungo1127G1373 Vigna mungo HOM05D003806 ORTHO05D004346 1.7e-18 98.2 471 32.7
Glyma.12G022500 Glycine max HOM05D003806 ORTHO05D004346 3.8e-18 97.1 492 25.0
QL04p061548 Quercus lobata HOM05D003806 ORTHO05D004346 3.8e-18 97.1 613 33.0
Thecc.01G172500 Theobroma cacao HOM05D003806 ORTHO05D004346 6.5e-18 96.3 613 23.3
TWI60G0662 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 1.4e-17 95.1 560 24.3
CSS0010582 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 5.5e-17 93.2 483 30.2
Rhsim12G0014400 Rhododendron simsii HOM05D003806 ORTHO05D004346 5.5e-17 93.2 470 34.5
Cpa.g.sc8.294 Carica papaya HOM05D003806 ORTHO05D004346 1.6e-16 91.7 101 51.5
Lj3g0015803 Lotus japonicus HOM05D003806 ORTHO05D004346 2.1e-16 91.3 510 25.9
Haze_13639 Corylus avellana HOM05D003806 ORTHO05D004346 3.5e-16 90.5 510 31.2
Potri.006G021200 Populus trichocarpa HOM05D003806 ORTHO05D004346 3.5e-16 90.5 560 27.5
Oeu048050.1 Olea europaea HOM05D003806 ORTHO05D004346 4.6e-16 90.1 101 50.5
Manes.09G072900 Manihot esculenta HOM05D003806 ORTHO05D004346 1.0e-15 89.0 511 27.8
Ca_11242_v3 Cicer arietinum L. HOM05D003806 ORTHO05D004346 1.3e-15 88.6 508 36.2
Lalb_Chr01g0001171 Lupinus albus HOM05D003806 ORTHO05D004346 1.3e-15 88.6 482 27.6
Oeu021135.1 Olea europaea HOM05D003806 ORTHO05D004346 1.3e-15 88.6 101 50.5
RcHm_v2.0_Chr2g0153621 Rosa chinensis HOM05D003806 ORTHO05D004346 1.3e-15 88.6 614 32.1
vmacro08755 Vaccinium macrocarpon HOM05D003806 ORTHO05D004346 1.3e-15 88.6 469 34.5
Gorai.001G093100 Gossypium raimondii HOM05D003806 ORTHO05D004346 1.8e-15 88.2 101 48.5
Solyc07g043320.3 Solanum lycopersicum HOM05D003806 ORTHO05D004346 1.8e-15 88.2 563 23.6
Gohir.A07G081500 Gossypium hirsutum HOM05D003806 ORTHO05D004346 2.3e-15 87.8 100 49.0
Oeu003096.1 Olea europaea HOM05D003806 ORTHO05D004346 2.3e-15 87.8 544 29.8
Aqoxy1G01455 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 1.1e-14 85.5 560 24.8
Gohir.D07G087100 Gossypium hirsutum HOM05D003806 ORTHO05D004346 1.1e-14 85.5 101 46.5
Nn7g38253 Nelumbo nucifera HOM05D003806 ORTHO05D004346 1.5e-14 85.1 101 47.5
Duzib133G0409 Durio zibethinus HOM05D003806 ORTHO05D004346 2.5e-14 84.3 101 47.5
Sopen07g022880 Solanum pennellii HOM05D003806 ORTHO05D004346 2.5e-14 84.3 563 25.6
Atru.chr8.989 Acer truncatum HOM05D003806 ORTHO05D004346 3.3e-14 84.0 481 24.9
Sabra06G0015000 Salix brachista HOM05D003806 ORTHO05D004346 4.3e-14 83.6 99 48.5
COL.COLO4_33757 Corchorus olitorius HOM05D003806 ORTHO05D004346 5.7e-14 83.2 615 28.9
CSS0042337 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 7.4e-14 82.8 473 38.9
Actinidia12514 Actinidia chinensis HOM05D003806 ORTHO05D004346 9.7e-14 82.4 85 55.3
Actinidia28585 Actinidia chinensis HOM05D003806 ORTHO05D004346 1.6e-13 81.6 476 26.7
CANSAT64G1444 Cannabis sativa HOM05D003806 ORTHO05D004346 2.2e-13 81.3 100 47.0
TPR.G21252 Trifolium pratense HOM05D003806 ORTHO05D004346 3.7e-13 80.5 252 36.1
CiPaw.04G076200 Carya illinoinensis HOM05D003806 ORTHO05D004346 4.8e-13 80.1 101 48.5
Psat7g179080 Pisum sativum HOM05D003806 ORTHO05D004346 4.8e-13 80.1 486 28.4
Ciclev10010914m.g Citrus clementina HOM05D003806 ORTHO05D004346 8.2e-13 79.3 613 29.2
Gohir.D11G163300 Gossypium hirsutum HOM05D003806 ORTHO05D004346 1.8e-12 78.2 579 28.2
FAN05G0560 Fragaria x ananassa HOM05D003806 ORTHO05D004346 3.1e-12 77.4 457 30.9
THA.LOC104800972 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 5.3e-12 76.6 586 30.0
FvH4_6g39571 Fragaria vesca HOM05D003806 ORTHO05D004346 6.9e-12 76.3 457 31.5
Gorai.007G174000 Gossypium raimondii HOM05D003806 ORTHO05D004346 9.0e-12 75.9 579 28.0
Potri.016G018700 Populus trichocarpa HOM05D003806 ORTHO05D004346 9.0e-12 75.9 560 29.3
CsaV3_4G007390 Cucumis sativus L. HOM05D003806 ORTHO05D004346 1.5e-11 75.1 101 41.6
Gohir.A11G156200 Gossypium hirsutum HOM05D003806 ORTHO05D004346 1.5e-11 75.1 571 28.4
MELO3C016203.2 Cucumis melo HOM05D003806 ORTHO05D004346 2.0e-11 74.7 101 41.6
Lalb_Chr19g0139591 Lupinus albus HOM05D003806 ORTHO05D004346 4.5e-11 73.6 491 23.6
THA.LOC104816049 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 4.5e-11 73.6 80 52.5
ClCG07G010910 Citrullus lanatus HOM05D003806 ORTHO05D004346 5.9e-11 73.2 101 40.6
TAR626G1670 Trochodendron aralioides HOM05D003806 ORTHO05D004346 7.7e-11 72.8 553 27.5
HanXRQChr06g0171661 Helianthus annuus HOM05D003806 ORTHO05D004346 6.5e-10 69.7 97 47.4
Hund19432 Selenicereus undatus HOM05D003806 ORTHO05D004346 1.1e-09 68.9 71 54.9
AUR62020559 Chenopodium quinoa HOM05D003806 ORTHO05D004346 1.9e-09 68.2 78 47.4
AUR62020563 Chenopodium quinoa HOM05D003806 ORTHO05D004346 2.5e-09 67.8 78 47.4
C04p17390 Brassica napus HOM05D003806 ORTHO05D004346 3.2e-09 67.4 209 32.1
Sc23g0004300 Simmondsia chinensis HOM05D003806 ORTHO05D004346 4.2e-09 67.0 92 45.7
EL10Ac2g03814 Beta vulgaris HOM05D003806 ORTHO05D004346 5.5e-09 66.6 247 28.7
Phvul.011G024500 Phaseolus vulgaris HOM05D003806 ORTHO05D004346 9.4e-09 65.9 175 37.1
HanXRQChr17g0541141 Helianthus annuus HOM05D003806 ORTHO05D004346 1.2e-08 65.5 97 45.4
PGR031G3264 Punica granatum HOM05D003806 ORTHO05D004346 1.6e-08 65.1 422 23.0
BcaC02g11341 Brassica carinata HOM05D003806 ORTHO05D001704 2.1e-08 64.7 208 31.2
CDE02G3965 Ceratophyllum demersum HOM05D003806 ORTHO05D004346 2.1e-08 64.7 103 40.8
CDE05G0051 Ceratophyllum demersum HOM05D003806 ORTHO05D004346 2.1e-08 64.7 93 43.0
Ah.11g044370 Amaranthus hybridus HOM05D003806 ORTHO05D004346 3.6e-08 63.9 77 44.2
FAN02G2860 Fragaria x ananassa HOM05D003806 ORTHO05D004346 3.6e-08 63.9 182 37.4
FAN14G1588 Fragaria x ananassa HOM05D003806 ORTHO05D004346 4.6e-08 63.5 179 36.9
FAN14G4911 Fragaria x ananassa HOM05D003806 ORTHO05D004346 4.6e-08 63.5 179 36.9
MBI02_g35832_MAGBIO Magnolia biondii HOM05D003806 ORTHO05D004346 4.6e-08 63.5 561 23.9
Sabra06G0014600 Salix brachista HOM05D003806 ORTHO05D004346 4.6e-08 63.5 452 23.0
FAN09G2907 Fragaria x ananassa HOM05D003806 ORTHO05D004346 6.1e-08 63.2 411 33.3
Aqoxy7G02954 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 1.4e-07 62.0 473 27.7
BraA05t20242Z Brassica rapa HOM05D003806 ORTHO05D004346 3.0e-07 60.8 209 32.5
Carub.0001s0463 Capsella rubella HOM05D003806 ORTHO05D004346 3.9e-07 60.5 517 24.6
AL4G27610 Arabidopsis lyrata HOM05D003806 ORTHO05D004346 8.8e-07 59.3 74 47.3
Sed0003037 Sechium edule HOM05D003806 ORTHO05D004346 8.8e-07 59.3 101 35.6
Actinidia31596 Actinidia chinensis HOM05D003806 ORTHO05D004346 4.3e-06 57.0 101 38.6
A05p13020 Brassica napus HOM05D003806 ORTHO05D004346 4.3e-06 57.0 211 33.6
AT2G32240 Arabidopsis thaliana HOM05D003806 ORTHO05D004346 5.7e-06 56.6 71 47.9


User provided reference genes

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