Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4939 Utricularia gibba HOM05D003999 ORTHO05D005219 0.0e+00 1203.7 588 100.0
unitig_578.g16064 Utricularia gibba HOM05D003999 ORTHO05D005219 3.4e-192 675.6 532 67.1
MSTRG.26544 Avicennia marina HOM05D003999 ORTHO05D005219 1.8e-105 387.5 457 49.7
Migut.L01882 Erythranthe guttata HOM05D003999 ORTHO05D005219 2.4e-97 360.5 455 45.5
Dinv41175 Davidia involucrata HOM05D003999 ORTHO05D005219 3.1e-89 333.6 469 42.4
Rhsim03G0266100 Rhododendron simsii HOM05D003999 ORTHO05D005219 1.6e-85 321.2 460 43.5
Actinidia38494 Actinidia chinensis HOM05D003999 ORTHO05D005219 1.8e-84 317.8 504 40.7
SGA_v2.0_scaffold231G43410 Striga asiatica HOM05D003999 ORTHO05D005219 4.0e-84 316.6 306 52.0
Actinidia29951 Actinidia chinensis HOM05D003999 ORTHO05D005219 1.5e-83 314.7 501 40.1
vmacro05997 Vaccinium macrocarpon HOM05D003999 ORTHO05D005219 4.9e-82 309.7 458 43.2
Cfa013453 Carpinus fangiana HOM05D003999 ORTHO05D005219 3.1e-81 307.0 465 39.4
Manes.06G019800 Manihot esculenta HOM05D003999 ORTHO05D005219 4.1e-81 306.6 486 38.7
Atru.chr7.755 Acer truncatum HOM05D003999 ORTHO05D005219 2.0e-80 304.3 469 40.1
Atru.chr7.776 Acer truncatum HOM05D003999 ORTHO05D005219 2.0e-80 304.3 469 40.1
Prupe.1G075400 Prunus persica HOM05D003999 ORTHO05D005219 2.9e-79 300.4 470 39.1
Gohir.D06G185700 Gossypium hirsutum HOM05D003999 ORTHO05D005219 6.6e-79 299.3 573 35.1
Duzib106G1697 Durio zibethinus HOM05D003999 ORTHO05D005219 2.5e-78 297.4 371 43.9
Gorai.010G217300 Gossypium raimondii HOM05D003999 ORTHO05D005219 5.6e-78 296.2 573 35.1
Hund06701 Selenicereus undatus HOM05D003999 ORTHO05D005219 5.6e-78 296.2 497 38.4
CiPaw.07G197100 Carya illinoinensis HOM05D003999 ORTHO05D005219 6.1e-77 292.7 506 37.5
Cc06_g20850 Coffea canephora HOM05D003999 ORTHO05D005219 1.0e-76 292.0 432 39.8
Gohir.A06G176100 Gossypium hirsutum HOM05D003999 ORTHO05D005219 1.8e-76 291.2 603 34.5
Potri.006G075400 Populus trichocarpa HOM05D003999 ORTHO05D005219 8.9e-76 288.9 567 35.8
Sabra18G0116200 Salix brachista HOM05D003999 ORTHO05D005219 3.4e-75 287.0 581 34.9
EL10Ac8g19270 Beta vulgaris HOM05D003999 ORTHO05D005219 4.4e-75 286.6 485 37.9
Duzib114G0910 Durio zibethinus HOM05D003999 ORTHO05D005219 9.8e-75 285.4 469 36.5
Sopen02g019140 Solanum pennellii HOM05D003999 ORTHO05D005219 2.2e-74 284.3 483 38.1
Hma1.2p1_1326F.1_g275830 Hydrangea macrophylla HOM05D003999 ORTHO05D005219 4.9e-74 283.1 463 39.1
Thecc.10G174600 Theobroma cacao HOM05D003999 ORTHO05D005219 6.4e-74 282.7 347 45.0
Peaxi162Scf00670g00347 Petunia axillaris HOM05D003999 ORTHO05D005219 2.4e-73 280.8 457 40.5
AUR62027455 Chenopodium quinoa HOM05D003999 ORTHO05D005219 3.2e-73 280.4 435 40.9
Migut.J00798 Erythranthe guttata HOM05D003999 ORTHO05D005219 3.2e-73 280.4 345 48.1
Ciclev10010423m.g Citrus clementina HOM05D003999 ORTHO05D005219 5.4e-73 279.6 464 37.3
CAN.G79.26 Capsicum annuum HOM05D003999 ORTHO05D005219 1.2e-72 278.5 472 39.4
Sed0001699 Sechium edule HOM05D003999 ORTHO05D005219 1.6e-72 278.1 457 38.9
COL.COLO4_08503 Corchorus olitorius HOM05D003999 ORTHO05D005219 3.5e-72 276.9 617 34.2
TWI63G1413 Tripterygium wilfordii HOM05D003999 ORTHO05D005219 3.5e-72 276.9 490 36.9
FAN04G0885 Fragaria x ananassa HOM05D003999 ORTHO05D005219 5.9e-72 276.2 558 34.8
RcHm_v2.0_Chr7g0219501 Rosa chinensis HOM05D003999 ORTHO05D005219 5.9e-72 276.2 578 34.9
Lj1g0014223 Lotus japonicus HOM05D003999 ORTHO05D005219 1.7e-71 274.6 506 35.6
FAN18G4269 Fragaria x ananassa HOM05D003999 ORTHO05D005219 2.9e-71 273.9 547 34.4
SalBow5G4070 Salvia bowleyana HOM05D003999 ORTHO05D005219 2.9e-71 273.9 466 38.8
FAN13G0316 Fragaria x ananassa HOM05D003999 ORTHO05D005219 3.9e-71 273.5 559 34.0
Glyma.04G001900 Glycine max HOM05D003999 ORTHO05D005219 3.9e-71 273.5 433 37.4
MD13G1241700 Malus domestica HOM05D003999 ORTHO05D005219 5.0e-71 273.1 445 38.4
Sc08g0004740 Simmondsia chinensis HOM05D003999 ORTHO05D005219 6.6e-71 272.7 499 37.5
AUR62031249 Chenopodium quinoa HOM05D003999 ORTHO05D005219 8.6e-71 272.3 496 37.1
Ca_15280_v3 Cicer arietinum L. HOM05D003999 ORTHO05D005219 1.9e-70 271.2 508 37.0
Potri.018G142300 Populus trichocarpa HOM05D003999 ORTHO05D005219 5.6e-70 269.6 546 35.5
Sabra06G0056300 Salix brachista HOM05D003999 ORTHO05D005219 2.1e-69 267.7 578 34.3
Sed0015737 Sechium edule HOM05D003999 ORTHO05D005219 1.0e-68 265.4 344 43.6
Phvul.009G117100 Phaseolus vulgaris HOM05D003999 ORTHO05D005219 1.8e-68 264.6 447 36.5
Gohir.D10G188000 Gossypium hirsutum HOM05D003999 ORTHO05D005219 4.0e-68 263.5 369 41.5
Glyma.06G001400 Glycine max HOM05D003999 ORTHO05D005219 6.8e-68 262.7 431 36.9
Nn8g40781 Nelumbo nucifera HOM05D003999 ORTHO05D005219 1.2e-67 261.9 334 45.5
Medtr3g100350 Medicago truncatula HOM05D003999 ORTHO05D005219 1.5e-67 261.5 446 36.5
TWI34G1954 Tripterygium wilfordii HOM05D003999 ORTHO05D005219 4.4e-67 260.0 503 34.6
Aqoxy7G02806 Aquilegia oxysepala HOM05D003999 ORTHO05D005219 5.8e-67 259.6 325 44.9
VMungo1309G0585 Vigna mungo HOM05D003999 ORTHO05D005219 2.2e-66 257.7 419 36.8
ECA240G0372 Erigeron canadensis HOM05D003999 ORTHO05D005219 6.4e-66 256.1 339 41.9
Gorai.011G210800 Gossypium raimondii HOM05D003999 ORTHO05D005219 2.4e-65 254.2 354 40.7
TAR625G1146 Trochodendron aralioides HOM05D003999 ORTHO05D005219 3.2e-65 253.8 478 35.4
TPR.G6349 Trifolium pratense HOM05D003999 ORTHO05D005219 1.2e-64 251.9 302 43.0
DCAR_014666 Daucus carota HOM05D003999 ORTHO05D005219 3.5e-64 250.4 313 44.4
MD16G1248600 Malus domestica HOM05D003999 ORTHO05D005219 3.5e-64 250.4 468 37.0
MELO3C017428.2 Cucumis melo HOM05D003999 ORTHO05D005219 1.3e-63 248.4 304 44.7
Gohir.A10G181100 Gossypium hirsutum HOM05D003999 ORTHO05D005219 3.9e-63 246.9 458 35.4
Psat5g048320 Pisum sativum HOM05D003999 ORTHO05D005219 3.9e-63 246.9 337 41.5
CsaV3_1G031880 Cucumis sativus L. HOM05D003999 ORTHO05D005219 8.6e-63 245.7 305 44.6
Lalb_Chr11g0061221 Lupinus albus HOM05D003999 ORTHO05D005219 3.3e-62 243.8 490 34.1
arahy.Tifrunner.gnm1.ann1.K74ZDU Arachis hypogaea HOM05D003999 ORTHO05D005219 4.3e-62 243.4 506 34.6
Solyc02g069980.4 Solanum lycopersicum HOM05D003999 ORTHO05D005219 7.3e-62 242.7 446 36.5
Eucgr.C02221 Eucalyptus grandis HOM05D003999 ORTHO05D005219 2.8e-61 240.7 311 42.1
HanXRQChr09g0244721 Helianthus annuus HOM05D003999 ORTHO05D005219 6.2e-61 239.6 339 41.0
FvH4_5g27730 Fragaria vesca HOM05D003999 ORTHO05D005219 1.4e-60 238.4 558 32.8
MBI16_g05835_MAGBIO Magnolia biondii HOM05D003999 ORTHO05D005219 1.8e-60 238.0 434 35.5
Nitab4.5_0001225g0140 Nicotiana tabacum HOM05D003999 ORTHO05D005219 1.8e-60 238.0 432 38.2
FAN08G2100 Fragaria x ananassa HOM05D003999 ORTHO05D005219 6.8e-60 236.1 558 32.6
Nitab4.5_0001583g0100 Nicotiana tabacum HOM05D003999 ORTHO05D005219 1.5e-59 235.0 432 37.5
Haze_22020 Corylus avellana HOM05D003999 ORTHO05D005219 5.8e-59 233.0 408 37.3
THA.LOC104814650 Tarenaya hassleriana HOM05D003999 ORTHO05D005219 7.5e-59 232.6 381 37.5
TAR626G1281 Trochodendron aralioides HOM05D003999 ORTHO05D005219 9.8e-59 232.3 311 42.8
CiPaw.08G032500 Carya illinoinensis HOM05D003999 ORTHO05D005219 3.7e-58 230.3 320 43.8
arahy.Tifrunner.gnm1.ann1.M9AABA Arachis hypogaea HOM05D003999 ORTHO05D005219 6.4e-58 229.6 516 33.9
DCAR_020148 Daucus carota HOM05D003999 ORTHO05D005219 1.1e-57 228.8 456 35.1
CSS0024594 Camellia sinensis var. sinensis HOM05D003999 ORTHO05D005219 4.1e-57 226.9 407 37.3
PSO170G0656 Papaver somniferum HOM05D003999 ORTHO05D005219 4.6e-56 223.4 371 34.8
TAR383G0399 Trochodendron aralioides HOM05D003999 ORTHO05D005219 1.3e-55 221.9 310 41.9
Zm00001eb002000 Zea mays HOM05D003999 ORTHO05D005219 1.1e-54 218.8 290 39.0
DCAR_018034 Daucus carota HOM05D003999 ORTHO05D005219 1.9e-54 218.0 287 43.2
MBI13_g34042_MAGBIO Magnolia biondii HOM05D003999 ORTHO05D005219 4.3e-54 216.9 516 32.2
Lsat_1_v5_gn_7_51121 Lactuca sativa HOM05D003999 ORTHO05D005219 1.6e-53 214.9 321 39.6
ATR0681G357 Amborella trichopoda HOM05D003999 ORTHO05D005219 1.4e-52 211.8 318 38.1
Cc00_g03720 Coffea canephora HOM05D003999 ORTHO05D005219 1.2e-51 208.8 399 35.1
Os04g0425100 Oryza sativa ssp. japonica HOM05D003999 ORTHO05D005219 4.4e-51 206.8 314 39.8
Ciclev10008331m.g Citrus clementina HOM05D003999 ORTHO05D005219 5.8e-51 206.5 276 39.9
Haze_18974 Corylus avellana HOM05D003999 ORTHO05D005219 8.4e-50 202.6 278 39.2
Carub.0003s3349 Capsella rubella HOM05D003999 ORTHO05D005219 3.2e-49 200.7 274 41.6
AT2G19260 Arabidopsis thaliana HOM05D003999 ORTHO05D005219 5.4e-49 199.9 299 38.8
GSVIVG01010859001 Vitis vinifera HOM05D003999 ORTHO05D005219 9.2e-49 199.1 147 58.5
Potri.006G277400 Populus trichocarpa HOM05D003999 ORTHO05D005219 4.6e-48 196.8 378 32.3
CSS0017119 Camellia sinensis var. sinensis HOM05D003999 ORTHO05D005219 1.3e-47 195.3 413 33.9
AL3G49030 Arabidopsis lyrata HOM05D003999 ORTHO05D005219 3.0e-47 194.1 260 41.5
BolC9t54356H Brassica oleracea HOM05D003999 ORTHO05D005219 5.1e-47 193.4 307 37.8
Sp3g32620 Schrenkiella parvula HOM05D003999 ORTHO05D005219 5.1e-47 193.4 252 41.7
C09p14530 Brassica napus HOM05D003999 ORTHO05D005219 2.5e-46 191.0 242 41.3
Haze_18980 Corylus avellana HOM05D003999 ORTHO05D005219 3.3e-46 190.7 298 36.6
Zm00001eb274650 Zea mays HOM05D003999 ORTHO05D005219 3.3e-46 190.7 275 41.1
Thecc.09G004800 Theobroma cacao HOM05D003999 ORTHO05D005219 4.3e-46 190.3 337 35.9
A07p01530 Brassica napus HOM05D003999 ORTHO05D005219 5.6e-46 189.9 280 36.8
BraA07t27954Z Brassica rapa HOM05D003999 ORTHO05D005219 5.6e-46 189.9 280 36.8
BcaC04g22860 Brassica carinata HOM05D003999 ORTHO05D005219 7.3e-46 189.5 262 39.7
BcaB07g31614 Brassica carinata HOM05D003999 ORTHO05D005219 9.6e-46 189.1 277 39.0
ATR0626G364 Amborella trichopoda HOM05D003999 ORTHO05D005219 2.1e-45 188.0 333 35.4
CDE06G2299 Ceratophyllum demersum HOM05D003999 ORTHO05D005219 2.8e-45 187.6 246 41.5
Thhalv10022602m.g Eutrema salsugineum HOM05D003999 ORTHO05D005219 2.4e-44 184.5 332 35.8
Cfa020676 Carpinus fangiana HOM05D003999 ORTHO05D005219 5.2e-44 183.3 275 40.0
Oeu064556.1 Olea europaea HOM05D003999 ORTHO05D005219 5.8e-43 179.9 314 37.9
BcaB03g16715 Brassica carinata HOM05D003999 ORTHO05D005219 1.7e-42 178.3 250 38.8
C07p03110 Brassica napus HOM05D003999 ORTHO05D005219 4.9e-42 176.8 250 38.4
BolC7t40703H Brassica oleracea HOM05D003999 ORTHO05D005219 4.9e-42 176.8 250 38.4
Actinidia27131 Actinidia chinensis HOM05D003999 ORTHO05D005219 6.4e-42 176.4 341 37.8
BcaC06g36543 Brassica carinata HOM05D003999 ORTHO05D005219 6.4e-42 176.4 250 38.0
CDE02G3353 Ceratophyllum demersum HOM05D003999 ORTHO05D005219 7.1e-41 172.9 234 39.3
CiPaw.15G150400 Carya illinoinensis HOM05D003999 ORTHO05D005219 4.6e-40 170.2 269 37.9
PGSC0003DMG400021118 Solanum tuberosum HOM05D003999 ORTHO05D005219 8.7e-39 166.0 431 32.0
Aa31LG8G16300 Aethionema arabicum HOM05D003999 ORTHO05D005219 1.5e-38 165.2 284 35.9
CARHR109720 Cardamine hirsuta HOM05D003999 ORTHO05D005219 1.9e-38 164.9 222 40.5
Atru.chr7.2670 Acer truncatum HOM05D003999 ORTHO05D005219 5.6e-38 163.3 210 40.5
ECA234G1030 Erigeron canadensis HOM05D003999 ORTHO05D005219 5.6e-38 163.3 194 42.8
Sabra06G0215100 Salix brachista HOM05D003999 ORTHO05D005219 1.6e-37 161.8 407 30.7
MSTRG.10442 Avicennia marina HOM05D003999 ORTHO05D005219 3.1e-36 157.5 111 62.2
ClCG06G013610 Citrullus lanatus HOM05D003999 ORTHO05D005219 3.1e-36 157.5 112 61.6
MSTRG.10441 Avicennia marina HOM05D003999 ORTHO05D005219 5.1e-31 140.2 280 37.1
SMO117G0282 Selaginella moellendorffii HOM05D003999 ORTHO05D005219 2.8e-29 134.4 254 32.7
Mapoly0046s0104 Marchantia polymorpha HOM05D003999 ORTHO05D005219 2.0e-27 128.3 274 33.2
SEGI_29375 Sequoiadendron giganteum HOM05D003999 ORTHO05D005219 4.6e-24 117.1 296 29.1
MBI16_g10833_MAGBIO Magnolia biondii HOM05D003999 ORTHO05D005219 1.9e-22 111.7 214 39.3
HPP92_010790 Vanilla planifolia HOM05D003999 ORTHO05D005219 2.8e-21 107.8 208 35.1
GSVIVG01035550001 Vitis vinifera HOM05D003999 ORTHO05D005219 5.3e-20 103.6 90 52.2
SEGI_05476 Sequoiadendron giganteum HOM05D003999 ORTHO05D005219 2.0e-19 101.7 274 29.6
FvH4_5g18011 Fragaria vesca HOM05D003999 ORTHO05D005219 1.3e-18 99.0 159 36.5
FAN18G0538 Fragaria x ananassa HOM05D003999 ORTHO05D005219 3.8e-18 97.4 156 35.9
Prupe.5G240400 Prunus persica HOM05D003999 ORTHO05D005219 6.5e-18 96.7 150 36.0
FAN13G0118 Fragaria x ananassa HOM05D003999 ORTHO05D005219 1.1e-17 95.9 156 35.9
Phvul.007G142700 Phaseolus vulgaris HOM05D003999 ORTHO05D005219 1.9e-17 95.1 193 32.1
Manes.03G002401 Manihot esculenta HOM05D003999 ORTHO05D005219 5.5e-17 93.6 134 41.0
PGR044G2313 Punica granatum HOM05D003999 ORTHO05D005219 7.1e-17 93.2 304 29.6
MD06G1235600 Malus domestica HOM05D003999 ORTHO05D005219 2.7e-16 91.3 150 37.3
RcHm_v2.0_Chr7g0177591 Rosa chinensis HOM05D003999 ORTHO05D005219 2.7e-16 91.3 161 32.9
Cfa020674 Carpinus fangiana HOM05D003999 ORTHO05D005219 1.5e-14 85.5 61 62.3
SEGI_17596 Sequoiadendron giganteum HOM05D003999 ORTHO05D005219 1.6e-13 82.0 194 28.4
PSO675G4589 Papaver somniferum HOM05D007740 ORTHO05D009757 1.9e-06 58.5 154 28.6
BraA09t36876Z Brassica rapa HOM05D003999 ORTHO05D005219 3.3e-06 57.8 82 35.4
RcHm_v2.0_Chr6g0296911 Rosa chinensis HOM05D004258 ORTHO05D005163 9.7e-06 56.2 52 42.3
TWI31G1475 Tripterygium wilfordii HOM05D002415 ORTHO05D002522 9.7e-06 56.2 102 28.4


User provided reference genes

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