Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 7.4e-141 503.8 248 100.0
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 3.2e-112 408.7 229 85.6
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.2e-108 396.0 231 81.0
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.8e-108 395.6 231 81.0
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 6.3e-108 394.4 232 81.5
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 5.2e-102 374.8 231 77.9
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 8.8e-102 374.0 234 76.9
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 9.8e-101 370.5 250 74.0
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 9.8e-101 370.5 233 78.1
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.3e-100 370.2 229 77.3
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 1.7e-100 369.8 231 77.1
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 3.7e-100 368.6 229 77.7
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 6.3e-100 367.9 232 76.3
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.1e-99 367.1 248 72.6
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 3.1e-99 365.5 232 76.3
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 5.4e-99 364.8 229 76.4
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 9.1e-99 364.0 234 76.5
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 9.1e-99 364.0 229 76.0
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 1.2e-98 363.6 229 77.3
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 2.0e-98 362.8 230 75.2
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 2.0e-98 362.8 234 76.1
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 2.0e-98 362.8 234 76.1
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 3.5e-98 362.1 241 73.4
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 7.7e-98 360.9 234 75.6
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 1.0e-97 360.5 229 75.5
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.0e-97 360.5 229 76.9
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 1.0e-97 360.5 242 71.1
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 1.0e-97 360.5 229 76.4
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 5.0e-97 358.2 229 76.4
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 6.6e-97 357.8 230 75.7
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 8.6e-97 357.5 242 71.9
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 1.1e-96 357.1 257 69.6
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 1.9e-96 356.3 239 73.6
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 3.3e-96 355.5 232 75.9
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 3.3e-96 355.5 238 74.8
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 5.5e-96 354.8 231 75.8
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 9.5e-96 354.0 232 75.9
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 1.2e-95 353.6 240 70.8
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 1.2e-95 353.6 229 73.8
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 2.1e-95 352.8 229 74.2
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 2.1e-95 352.8 229 74.2
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 2.8e-95 352.4 229 74.2
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 3.6e-95 352.1 229 74.2
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 6.1e-95 351.3 244 69.7
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 1.0e-94 350.5 229 73.8
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 3.0e-94 349.0 239 71.5
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 5.2e-94 348.2 229 76.0
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 6.8e-94 347.8 248 69.0
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 1.2e-93 347.1 245 70.6
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 1.2e-93 347.1 239 71.1
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 1.5e-93 346.7 256 67.6
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 1.5e-93 346.7 248 69.8
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 1.5e-93 346.7 229 73.8
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 1.5e-93 346.7 229 72.5
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 2.0e-93 346.3 238 71.8
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 2.0e-93 346.3 244 70.5
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 3.4e-93 345.5 229 73.4
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 3.4e-93 345.5 209 80.4
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 5.7e-93 344.7 229 73.8
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 5.7e-93 344.7 245 71.8
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 9.8e-93 344.0 248 69.4
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 9.8e-93 344.0 234 72.6
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 1.3e-92 343.6 220 76.4
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 2.2e-92 342.8 251 67.3
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 3.7e-92 342.0 241 69.3
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 4.9e-92 341.7 255 67.1
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 4.9e-92 341.7 228 73.2
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 1.1e-91 340.5 244 68.9
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 1.8e-91 339.7 237 71.7
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.8e-91 339.7 229 71.2
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 2.4e-91 339.3 242 69.4
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 2.4e-91 339.3 314 57.6
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 7.0e-91 337.8 245 67.3
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 7.0e-91 337.8 229 71.2
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 9.2e-91 337.4 234 70.1
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 1.2e-90 337.0 241 69.3
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 2.7e-90 335.9 232 69.4
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 5.9e-90 334.7 234 69.7
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.7e-89 333.2 209 76.1
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 3.8e-89 332.0 244 67.6
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 3.8e-89 332.0 244 67.6
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 3.8e-89 332.0 244 68.4
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 3.8e-89 332.0 228 68.4
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 1.1e-88 330.5 243 66.3
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 3.3e-88 328.9 255 65.9
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 3.3e-88 328.9 210 75.2
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 3.3e-88 328.9 234 69.7
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 4.3e-88 328.6 212 76.4
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 5.6e-88 328.2 229 72.9
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 3.6e-87 325.5 209 75.6
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 8.0e-87 324.3 230 69.6
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.4e-86 323.6 256 64.5
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 3.1e-86 322.4 213 73.7
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 6.8e-86 321.2 298 57.7
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 8.9e-86 320.9 241 66.0
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 5.8e-85 318.2 214 72.4
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 4.9e-84 315.1 215 71.2
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 6.0e-82 308.1 209 72.2
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.5e-80 303.5 199 74.9
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 6.2e-79 298.1 198 72.2
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 6.6e-73 278.1 198 66.7
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 4.4e-69 265.4 305 51.1
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 4.4e-69 265.4 223 60.5
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 1.7e-65 253.4 166 74.7
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 1.1e-64 250.8 229 54.1
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 4.4e-61 238.8 175 69.1
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 5.1e-57 225.3 225 52.0
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 4.3e-56 222.2 235 50.6
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 7.6e-53 211.5 144 68.8
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 1.4e-51 207.2 229 49.3
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 1.8e-46 190.3 149 65.8
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.0e-45 186.8 135 67.4
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 1.3e-44 184.1 146 64.4
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 6.4e-44 181.8 146 63.7
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 6.4e-44 181.8 143 65.0
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 9.6e-40 167.9 95 80.0
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 1.6e-39 167.2 182 50.5
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 9.9e-37 157.9 118 69.5
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 1.2e-34 151.0 96 75.0
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 2.7e-34 149.8 121 62.8
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 1.4e-30 137.5 95 70.5
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 2.4e-30 136.7 75 82.7
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.6e-23 114.0 65 75.4
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.5e-21 107.5 96 58.3
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 2.8e-15 86.7 175 34.3
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 6.3e-15 85.5 47 78.7
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 2.1e-10 70.5 112 41.1
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 1.8e-09 67.4 112 40.2


User provided reference genes

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