Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4690 Utricularia gibba HOM05D005251 ORTHO05D006680 2.3e-293 1011.5 515 100.0
Migut.L01497 Erythranthe guttata HOM05D005251 ORTHO05D006680 1.2e-182 643.7 546 64.7
MSTRG.10560 Avicennia marina HOM05D005251 ORTHO05D006680 2.8e-182 642.5 546 64.1
Cc06_g11450 Coffea canephora HOM05D005251 ORTHO05D006680 1.4e-170 603.6 542 61.1
GSVIVG01015197001 Vitis vinifera HOM05D005251 ORTHO05D006680 9.2e-170 600.9 532 60.7
Dinv36771 Davidia involucrata HOM05D005251 ORTHO05D006680 3.5e-169 599.0 546 59.9
CSS0048193 Camellia sinensis var. sinensis HOM05D005251 ORTHO05D006680 3.0e-168 595.9 546 59.9
CSS0047543 Camellia sinensis var. sinensis HOM05D005251 ORTHO05D006680 7.3e-167 591.3 546 59.7
Oeu018416.2 Olea europaea HOM05D005251 ORTHO05D006680 2.1e-166 589.7 552 59.2
Ciclev10010506m.g Citrus clementina HOM05D005251 ORTHO05D006680 8.4e-163 577.8 538 58.2
Gorai.010G083200 Gossypium raimondii HOM05D005251 ORTHO05D006680 8.4e-163 577.8 546 57.7
PGSC0003DMG400000278 Solanum tuberosum HOM05D005251 ORTHO05D006680 1.9e-162 576.6 544 58.5
Thecc.09G088600 Theobroma cacao HOM05D005251 ORTHO05D006680 1.9e-162 576.6 546 57.9
Gohir.D06G071400 Gossypium hirsutum HOM05D005251 ORTHO05D006680 5.4e-162 575.1 546 57.5
TWI34G0442 Tripterygium wilfordii HOM05D005251 ORTHO05D006680 9.2e-162 574.3 544 57.5
Prupe.7G209200 Prunus persica HOM05D005251 ORTHO05D006680 1.2e-161 573.9 546 57.0
Gohir.A06G072900 Gossypium hirsutum HOM05D005251 ORTHO05D006680 4.6e-161 572.0 546 57.3
RcHm_v2.0_Chr2g0093421 Rosa chinensis HOM05D005251 ORTHO05D006680 1.9e-159 566.6 563 56.3
Glyma.13G104400 Glycine max HOM05D005251 ORTHO05D006680 2.5e-159 566.2 550 58.9
FvH4_1g07540 Fragaria vesca HOM05D005251 ORTHO05D006680 4.3e-159 565.5 548 57.7
FAN19G0073 Fragaria x ananassa HOM05D005251 ORTHO05D006680 4.3e-159 565.5 540 58.3
Eucgr.C00887 Eucalyptus grandis HOM05D005251 ORTHO05D006680 5.6e-159 565.1 549 57.6
QL02p062545 Quercus lobata HOM05D005251 ORTHO05D006680 9.6e-159 564.3 557 55.1
CAN.G1241.24 Capsicum annuum HOM05D005251 ORTHO05D006680 1.6e-158 563.5 566 55.8
FAN23G1060 Fragaria x ananassa HOM05D005251 ORTHO05D006680 4.7e-158 562.0 540 58.3
Lsat_1_v5_gn_8_87701 Lactuca sativa HOM05D005251 ORTHO05D006680 8.1e-158 561.2 489 59.7
TAR624G0724 Trochodendron aralioides HOM05D005251 ORTHO05D006680 8.1e-158 561.2 548 57.7
FAN28G0072 Fragaria x ananassa HOM05D005251 ORTHO05D006680 3.1e-157 559.3 546 58.1
Rhsim05G0020500 Rhododendron simsii HOM05D005251 ORTHO05D006680 5.3e-157 558.5 550 55.8
Actinidia39715 Actinidia chinensis HOM05D005251 ORTHO05D006680 2.6e-156 556.2 546 57.1
Manes.03G034200 Manihot esculenta HOM05D005251 ORTHO05D006680 2.6e-156 556.2 545 56.7
CiPaw.03G215300 Carya illinoinensis HOM05D005251 ORTHO05D006680 5.8e-156 555.1 545 56.3
PGR142G3350 Punica granatum HOM05D005251 ORTHO05D006680 9.9e-156 554.3 545 56.9
COL.COLO4_18196 Corchorus olitorius HOM05D005251 ORTHO05D006680 1.3e-155 553.9 492 60.4
Sc18g0002110 Simmondsia chinensis HOM05D005251 ORTHO05D006680 1.3e-155 553.9 516 58.9
Phvul.003G136700 Phaseolus vulgaris HOM05D005251 ORTHO05D006680 2.9e-155 552.7 543 57.5
Ah.09g228240 Amaranthus hybridus HOM05D005251 ORTHO05D006680 1.4e-154 550.4 535 56.8
Ca_21279_v3 Cicer arietinum L. HOM05D005251 ORTHO05D006680 1.4e-154 550.4 524 59.5
Potri.006G152100 Populus trichocarpa HOM05D005251 ORTHO05D006680 2.4e-154 549.7 549 55.6
MD02G1080200 Malus domestica HOM05D005251 ORTHO05D006680 4.2e-154 548.9 568 53.9
Atru.BG.14.p Acer truncatum HOM05D005251 ORTHO05D006680 7.1e-154 548.1 531 57.6
Nn8g38856 Nelumbo nucifera HOM05D005251 ORTHO05D006680 7.1e-154 548.1 547 55.9
THA.LOC104817759 Tarenaya hassleriana HOM05D005251 ORTHO05D006680 7.1e-154 548.1 542 57.2
EL10Ac8g19209 Beta vulgaris HOM05D005251 ORTHO05D006680 2.1e-153 546.6 534 56.6
Lj4A303G24 Lonicera japonica HOM05D005251 ORTHO05D006680 1.0e-152 544.3 516 58.5
AUR62029068 Chenopodium quinoa HOM05D005251 ORTHO05D006680 2.3e-152 543.1 534 56.9
FAN26G3339 Fragaria x ananassa HOM05D005251 ORTHO05D006680 5.1e-152 542.0 560 55.7
FAN26G1479 Fragaria x ananassa HOM05D005251 ORTHO05D006680 1.1e-151 540.8 560 55.9
Glyma.17G054700 Glycine max HOM05D005251 ORTHO05D006680 3.3e-151 539.3 507 60.2
Medtr4g126260 Medicago truncatula HOM05D005251 ORTHO05D006680 5.6e-151 538.5 544 57.5
AUR62033961 Chenopodium quinoa HOM05D005251 ORTHO05D006680 7.3e-151 538.1 529 56.9
Lj4g0006207 Lotus japonicus HOM05D005251 ORTHO05D006680 9.6e-151 537.7 544 56.8
CsaV3_1G040480 Cucumis sativus L. HOM05D005251 ORTHO05D006680 1.3e-150 537.3 545 55.6
arahy.Tifrunner.gnm1.ann1.Y01GTZ Arachis hypogaea HOM05D005251 ORTHO05D006680 2.1e-150 536.6 531 57.6
ECA232G2798 Erigeron canadensis HOM05D005251 ORTHO05D006680 2.8e-150 536.2 543 55.2
MELO3C015476.2 Cucumis melo HOM05D005251 ORTHO05D006680 3.6e-150 535.8 545 55.6
Psat4g015200 Pisum sativum HOM05D005251 ORTHO05D006680 3.4e-148 529.3 507 58.8
Cfa003082 Carpinus fangiana HOM05D005251 ORTHO05D006680 9.9e-148 527.7 538 54.6
HanXRQChr06g0178551 Helianthus annuus HOM05D005251 ORTHO05D006680 1.3e-147 527.3 551 54.8
VMungo1215G2738 Vigna mungo HOM05D005251 ORTHO05D006680 2.2e-147 526.6 533 56.8
AL8G32750 Arabidopsis lyrata HOM05D005251 ORTHO05D006680 2.4e-146 523.1 540 55.6
Haze_25916 Corylus avellana HOM05D005251 ORTHO05D006680 4.2e-146 522.3 538 54.5
TPR.G9472 Trifolium pratense HOM05D005251 ORTHO05D006680 4.2e-146 522.3 559 55.5
AT5G56900 Arabidopsis thaliana HOM05D005251 ORTHO05D006680 1.6e-145 520.4 540 55.4
Sp6g18620 Schrenkiella parvula HOM05D005251 ORTHO05D006680 2.7e-145 519.6 540 54.4
Sabra06G0120400 Salix brachista HOM05D005251 ORTHO05D006680 3.5e-145 519.2 544 54.4
BcaC04g20043 Brassica carinata HOM05D005251 ORTHO05D006680 1.0e-144 517.7 540 54.6
C09p48540 Brassica napus HOM05D005251 ORTHO05D006680 1.0e-144 517.7 540 54.6
BolC9t57695H Brassica oleracea HOM05D005251 ORTHO05D006680 1.0e-144 517.7 540 54.6
Aqoxy7G04044 Aquilegia oxysepala HOM05D005251 ORTHO05D006680 1.8e-144 516.9 546 54.0
BcaB08g36046 Brassica carinata HOM05D005251 ORTHO05D006680 1.8e-144 516.9 542 54.8
Thhalv10013022m.g Eutrema salsugineum HOM05D005251 ORTHO05D006680 4.3e-143 512.3 546 53.3
Carub.0008s1736 Capsella rubella HOM05D005251 ORTHO05D006680 5.6e-143 511.9 534 55.1
A10p14170 Brassica napus HOM05D005251 ORTHO05D006680 2.8e-142 509.6 570 51.9
Cpa.g.sc61.41 Carica papaya HOM05D005251 ORTHO05D006680 3.7e-142 509.2 546 49.5
Duzib150G0576 Durio zibethinus HOM05D005251 ORTHO05D006680 5.3e-141 505.4 546 52.7
PSO210G1153 Papaver somniferum HOM05D005251 ORTHO05D006680 1.2e-140 504.2 546 52.2
PSO210G7113 Papaver somniferum HOM05D005251 ORTHO05D006680 1.7e-139 500.4 546 51.6
ClCG03G015560 Citrullus lanatus HOM05D005251 ORTHO05D006680 2.9e-139 499.6 511 55.8
MBI04_g31157_MAGBIO Magnolia biondii HOM05D005251 ORTHO05D006680 1.9e-138 496.9 512 55.5
Sed0019984 Sechium edule HOM05D005251 ORTHO05D006680 5.5e-138 495.4 486 58.0
Aa31LG3G12780 Aethionema arabicum HOM05D005251 ORTHO05D006680 7.9e-137 491.5 553 52.1
CANSAT56G1459 Cannabis sativa HOM05D005251 ORTHO05D006680 1.4e-133 480.7 490 54.5
BraA10t43510Z Brassica rapa HOM05D005251 ORTHO05D006680 9.0e-133 478.0 551 50.8
Os09g0364000 Oryza sativa ssp. japonica HOM05D005251 ORTHO05D006680 1.6e-121 440.7 551 48.5
SGA_v2.0_scaffold21G09390 Striga asiatica HOM05D005251 ORTHO05D006680 3.9e-120 436.0 373 65.4
vmacro17241 Vaccinium macrocarpon HOM05D005251 ORTHO05D006680 1.7e-115 420.6 424 56.6
Lalb_Chr12g0199791 Lupinus albus HOM05D005251 ORTHO05D006680 9.1e-109 398.3 377 59.7
MD15G1207600 Malus domestica HOM05D005251 ORTHO05D006680 5.7e-103 379.0 400 49.2
CARHR270650 Cardamine hirsuta HOM05D005251 ORTHO05D006680 2.0e-100 370.5 358 59.2
Peaxi162Scf00498g00321 Petunia axillaris HOM05D005251 ORTHO05D006680 1.2e-97 361.3 340 56.8
SMO147G0126 Selaginella moellendorffii HOM05D005251 ORTHO05D006680 1.2e-97 361.3 524 44.1
Pp3c16_14300 Physcomitrium patens HOM05D005251 ORTHO05D006680 4.1e-93 346.3 585 39.7
SMO273G0018 Selaginella moellendorffii HOM05D005251 ORTHO05D006680 1.6e-92 344.4 579 40.4
Atru.chr7.1595 Acer truncatum HOM05D005251 ORTHO05D006680 1.4e-88 331.3 297 63.3
Mapoly0009s0116 Marchantia polymorpha HOM05D005251 ORTHO05D006680 6.8e-88 328.9 584 38.2
Nitab4.5_0000540g0310 Nicotiana tabacum HOM05D005251 ORTHO05D006680 8.8e-88 328.6 293 57.7
Solyc12g008870.1 Solanum lycopersicum HOM05D005251 ORTHO05D006680 3.1e-85 320.1 293 64.2
Sopen12g003800 Solanum pennellii HOM05D005251 ORTHO05D006680 1.6e-84 317.8 293 63.1
Nitab4.5_0008523g0050 Nicotiana tabacum HOM05D005251 ORTHO05D006680 6.1e-81 305.8 281 55.9
AagrBONN_evm.TU.Sc2ySwM_228.1764 Anthoceros agrestis HOM05D005251 ORTHO05D006680 7.5e-71 272.3 552 33.7
Zm00001eb311020 Zea mays HOM05D005251 ORTHO05D006680 3.7e-62 243.4 293 51.5
ATR0789G159 Amborella trichopoda HOM05D005251 ORTHO05D006680 5.8e-55 219.5 303 47.5
CBR_g54012 Chara braunii HOM05D005251 ORTHO05D006680 2.7e-52 210.7 642 29.3
SEGI_26696 Sequoiadendron giganteum HOM05D005251 ORTHO05D006680 6.2e-49 199.5 294 45.2
SGA_v2.0_scaffold21G09392 Striga asiatica HOM05D005251 ORTHO05D006680 1.5e-47 194.9 118 76.3
arahy.Tifrunner.gnm1.ann1.V18GKH Arachis hypogaea HOM05D005251 ORTHO05D006680 1.2e-44 185.3 110 76.4
Lalb_Chr12g0199801 Lupinus albus HOM05D005251 ORTHO05D006680 3.3e-42 177.2 112 71.4
Sopen12g003810 Solanum pennellii HOM05D005251 ORTHO05D006680 2.8e-41 174.1 113 70.8
Solyc12g008890.3 Solanum lycopersicum HOM05D005251 ORTHO05D006680 1.1e-40 172.2 113 69.9
HPP92_009143 Vanilla planifolia HOM05D005251 ORTHO05D006680 1.8e-40 171.4 172 50.6
arahy.Tifrunner.gnm1.ann1.BFBS1X Arachis hypogaea HOM05D005251 ORTHO05D006680 4.4e-39 166.8 156 54.5
Cre07.g338900 Chlamydomonas reinhardtii HOM05D005251 ORTHO05D006680 1.3e-38 165.2 572 27.1
ATR0789G123 Amborella trichopoda HOM05D005251 ORTHO05D006680 8.7e-35 152.5 113 61.1
PRCOL_00000275 Prasinoderma coloniale HOM05D005251 ORTHO05D006680 5.6e-34 149.8 594 26.3
vmacro17242 Vaccinium macrocarpon HOM05D005251 ORTHO05D006680 4.8e-33 146.7 96 71.9
Solyc05g032650.3 Solanum lycopersicum HOM05D005251 ORTHO05D006680 1.1e-32 145.6 287 33.4
C09p50860 Brassica napus HOM05D005251 ORTHO05D006680 4.0e-32 143.7 94 68.1
Duzib168G1322 Durio zibethinus HOM05D005251 ORTHO05D006680 4.0e-32 143.7 228 39.5
MD15G1207700 Malus domestica HOM05D005251 ORTHO05D006680 7.9e-28 129.4 85 65.9
Sopen05g023240 Solanum pennellii HOM05D005251 ORTHO05D006680 1.8e-27 128.3 93 63.4
VMungo1383G3543 Vigna mungo HOM05D005251 ORTHO05D006680 5.8e-23 113.2 158 41.8
vmacro17238 Vaccinium macrocarpon HOM05D005251 ORTHO05D006680 6.5e-22 109.8 117 50.4
HPP92_009144 Vanilla planifolia HOM05D005251 ORTHO05D006680 8.4e-22 109.4 156 39.7
MCO07G467 Micromonas commoda HOM05D005251 ORTHO05D006680 5.1e-19 100.1 343 27.1
Nitab4.5_0000540g0330 Nicotiana tabacum HOM05D005251 ORTHO05D006680 1.9e-18 98.2 62 69.4
BcaNung02827 Brassica carinata HOM05D005251 ORTHO05D006680 1.0e-14 85.9 169 34.3
BcaNung03955 Brassica carinata HOM05D005251 ORTHO05D006680 1.0e-14 85.9 169 34.3
C07p41650 Brassica napus HOM05D005251 ORTHO05D019858 7.2e-13 79.7 138 37.0
BcaNung02829 Brassica carinata HOM05D005251 ORTHO05D019858 6.7e-11 73.2 107 41.1
vmacro22302 Vaccinium macrocarpon HOM05D005251 ORTHO05D006680 1.1e-10 72.4 56 62.5
BolC9t57946H Brassica oleracea HOM05D005251 ORTHO05D006680 1.6e-09 68.6 51 60.8
Psat0s986g0040 Pisum sativum HOM05D003636 ORTHO05D005160 1.8e-08 65.1 119 32.8
CBR_g41119 Chara braunii HOM05D003636 ORTHO05D005160 3.1e-08 64.3 157 27.4
C06p07130 Brassica napus HOM05D005251 ORTHO05D006680 1.5e-07 62.0 41 63.4
AagrBONN_evm.TU.Sc2ySwM_228.671 Anthoceros agrestis HOM05D003636 ORTHO05D005160 7.7e-07 59.7 144 27.8
BolC7t44699H Brassica oleracea HOM05D005251 ORTHO05D019858 7.7e-07 59.7 122 33.6
SMO356G0642 Selaginella moellendorffii HOM05D003636 ORTHO05D005160 1.0e-06 59.3 105 29.5
Pp3c6_28790 Physcomitrium patens HOM05D003636 ORTHO05D005160 1.3e-06 58.9 119 29.4
SalBow5G3528 Salvia bowleyana HOM05D000147 ORTHO05D005311 5.0e-06 57.0 34 67.6
Actinidia25250 Actinidia chinensis HOM05D005251 ORTHO05D006680 8.5e-06 56.2 35 68.6


User provided reference genes

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