Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4077 Utricularia gibba HOM05D001092 ORTHO05D000923 3.1e-113 411.8 198 100.0
unitig_17.g29363 Utricularia gibba HOM05D001092 ORTHO05D000923 1.2e-112 409.8 198 99.5
unitig_0.g1659 Utricularia gibba HOM05D001092 ORTHO05D000923 1.2e-98 363.2 183 92.9
unitig_578.g15846 Utricularia gibba HOM05D001092 ORTHO05D000923 2.8e-98 362.1 183 91.3
Migut.G00017 Erythranthe guttata HOM05D001092 ORTHO05D000923 1.6e-69 266.5 177 70.1
SalBow8G3461 Salvia bowleyana HOM05D001092 ORTHO05D000923 6.9e-65 251.1 177 66.1
MSTRG.3839 Avicennia marina HOM05D001092 ORTHO05D000923 2.9e-63 245.7 177 65.0
SGA_v2.0_scaffold157G37366 Striga asiatica HOM05D001092 ORTHO05D000923 1.4e-62 243.4 176 65.3
Oeu033616.1 Olea europaea HOM05D001092 ORTHO05D000923 6.0e-61 238.0 175 64.0
Lj6C698G8 Lonicera japonica HOM05D001092 ORTHO05D000923 9.6e-59 230.7 176 59.7
Sopen09g004100 Solanum pennellii HOM05D001092 ORTHO05D000923 4.8e-58 228.4 174 58.0
CSS0029198 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 1.4e-57 226.9 178 59.0
Dinv29544 Davidia involucrata HOM05D001092 ORTHO05D000923 1.4e-57 226.9 176 61.4
CAN.G824.5 Capsicum annuum HOM05D001092 ORTHO05D000923 9.0e-57 224.2 173 58.4
Lalb_Chr12g0200731 Lupinus albus HOM05D001092 ORTHO05D000923 4.5e-56 221.9 176 59.1
Medtr4g123110 Medicago truncatula HOM05D001092 ORTHO05D000923 4.5e-56 221.9 173 59.5
Cc03_g00400 Coffea canephora HOM05D001092 ORTHO05D000923 7.6e-56 221.1 179 57.0
Actinidia18491 Actinidia chinensis HOM05D001092 ORTHO05D000923 2.9e-55 219.2 176 59.7
Gorai.005G069700 Gossypium raimondii HOM05D001092 ORTHO05D000923 2.9e-55 219.2 176 60.8
vmacro07983 Vaccinium macrocarpon HOM05D001092 ORTHO05D000923 5.0e-55 218.4 177 56.5
Peaxi162Scf00290g00313 Petunia axillaris HOM05D001092 ORTHO05D000923 8.4e-55 217.6 176 56.2
Glyma.07G233100 Glycine max HOM05D001092 ORTHO05D000923 1.4e-54 216.9 173 59.0
Phvul.003G119100 Phaseolus vulgaris HOM05D001092 ORTHO05D000923 1.4e-54 216.9 173 59.5
CiPaw.01G132700 Carya illinoinensis HOM05D001092 ORTHO05D000923 1.9e-54 216.5 173 59.0
CANSAT78G0281 Cannabis sativa HOM05D001092 ORTHO05D000923 2.5e-54 216.1 173 61.8
Atru.chr4.3076 Acer truncatum HOM05D001092 ORTHO05D000923 3.2e-54 215.7 174 59.8
Aqoxy4G01581 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 4.2e-54 215.3 176 54.0
Lj4g0014122 Lotus japonicus HOM05D001092 ORTHO05D000923 4.2e-54 215.3 173 56.6
Gohir.D02G062000 Gossypium hirsutum HOM05D001092 ORTHO05D000923 5.5e-54 214.9 176 59.7
GSVIVG01017643001 Vitis vinifera HOM05D001092 ORTHO05D000923 5.5e-54 214.9 177 56.5
RcHm_v2.0_Chr4g0426501 Rosa chinensis HOM05D001092 ORTHO05D000923 7.2e-54 214.5 174 55.7
Thecc.04G308400 Theobroma cacao HOM05D001092 ORTHO05D000923 1.2e-53 213.8 178 58.4
Psat0s45g0120 Pisum sativum HOM05D001092 ORTHO05D000923 1.6e-53 213.4 173 57.2
Solyc09g009370.4 Solanum lycopersicum HOM05D001092 ORTHO05D000923 2.1e-53 213.0 158 60.1
Lalb_Chr13g0298791 Lupinus albus HOM05D001092 ORTHO05D000923 2.7e-53 212.6 173 57.8
TPR.G12636 Trifolium pratense HOM05D001092 ORTHO05D000923 2.7e-53 212.6 173 56.1
COL.COLO4_34529 Corchorus olitorius HOM05D001092 ORTHO05D000923 6.1e-53 211.5 175 58.3
Gohir.A02G056800 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.8e-52 209.9 173 59.0
Rhsim04G0245300 Rhododendron simsii HOM05D001092 ORTHO05D000923 5.1e-52 208.4 177 55.9
TWI73G1237 Tripterygium wilfordii HOM05D001092 ORTHO05D000923 1.1e-51 207.2 173 56.6
Ciclev10004114m.g Citrus clementina HOM05D001092 ORTHO05D000923 1.5e-51 206.8 174 57.5
MD13G1146800 Malus domestica HOM05D001092 ORTHO05D000923 4.3e-51 205.3 173 55.5
FvH4_4g20980 Fragaria vesca HOM05D001092 ORTHO05D000923 5.7e-51 204.9 174 55.7
QL06p013490 Quercus lobata HOM05D001092 ORTHO05D000923 9.7e-51 204.1 176 55.7
Manes.03G209800 Manihot esculenta HOM05D001092 ORTHO05D000923 4.8e-50 201.8 173 55.5
PGR004G1484 Punica granatum HOM05D001092 ORTHO05D000923 4.8e-50 201.8 181 54.1
arahy.Tifrunner.gnm1.ann1.NU1CTT Arachis hypogaea HOM05D001092 ORTHO05D000923 1.8e-49 199.9 173 52.0
DCAR_023379 Daucus carota HOM05D001092 ORTHO05D000923 2.4e-49 199.5 179 57.0
Eucgr.H04089 Eucalyptus grandis HOM05D001092 ORTHO05D000923 2.4e-49 199.5 177 55.9
Prupe.1G110200 Prunus persica HOM05D001092 ORTHO05D000923 2.4e-49 199.5 173 53.8
Potri.008G100600 Populus trichocarpa HOM05D001092 ORTHO05D000923 3.1e-49 199.1 173 55.5
FAN17G2279 Fragaria x ananassa HOM05D001092 ORTHO05D000923 5.3e-49 198.4 176 55.7
MD16G1145300 Malus domestica HOM05D001092 ORTHO05D000923 9.0e-49 197.6 177 52.0
FAN12G2952 Fragaria x ananassa HOM05D001092 ORTHO05D000923 1.2e-48 197.2 174 54.6
Gorai.011G204400 Gossypium raimondii HOM05D001092 ORTHO05D000923 1.2e-48 197.2 173 53.8
Haze_00820 Corylus avellana HOM05D001092 ORTHO05D000923 1.5e-48 196.8 179 58.1
HanXRQChr10g0319871 Helianthus annuus HOM05D001092 ORTHO05D000923 1.5e-48 196.8 174 56.3
ClCG05G006770 Citrullus lanatus HOM05D001092 ORTHO05D000923 2.0e-48 196.4 173 53.8
BcaC07g37172 Brassica carinata HOM05D001092 ORTHO05D000923 4.5e-48 195.3 173 55.5
Gohir.D10G182400 Gossypium hirsutum HOM05D001092 ORTHO05D000923 4.5e-48 195.3 173 53.8
MD16G1145600 Malus domestica HOM05D001092 ORTHO05D000923 5.9e-48 194.9 173 52.6
PSO761G0196 Papaver somniferum HOM05D001092 ORTHO05D000923 5.9e-48 194.9 173 53.2
Sed0011983 Sechium edule HOM05D001092 ORTHO05D000923 5.9e-48 194.9 175 53.7
Sabra08G0076100 Salix brachista HOM05D001092 ORTHO05D000923 7.7e-48 194.5 173 53.8
AUR62003914 Chenopodium quinoa HOM05D001092 ORTHO05D000923 1.0e-47 194.1 173 54.9
Gohir.A10G175801 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.0e-47 194.1 173 52.6
HanXRQChr01g0031031 Helianthus annuus HOM05D001092 ORTHO05D000923 1.0e-47 194.1 172 55.8
C08p05520 Brassica napus HOM05D001092 ORTHO05D000923 1.7e-47 193.4 173 54.9
CsaV3_3G015400 Cucumis sativus L. HOM05D001092 ORTHO05D000923 2.9e-47 192.6 173 54.3
PSO210G3521 Papaver somniferum HOM05D001092 ORTHO05D000923 2.9e-47 192.6 173 52.6
A06p04720 Brassica napus HOM05D001092 ORTHO05D000923 3.8e-47 192.2 173 54.9
C06p02470 Brassica napus HOM05D001092 ORTHO05D000923 3.8e-47 192.2 173 54.9
BolC6t35374H Brassica oleracea HOM05D001092 ORTHO05D000923 3.8e-47 192.2 173 54.9
BraA06t23675Z Brassica rapa HOM05D001092 ORTHO05D000923 3.8e-47 192.2 173 54.9
Carub.0001s3719 Capsella rubella HOM05D001092 ORTHO05D000923 3.8e-47 192.2 180 53.9
A08p05240 Brassica napus HOM05D001092 ORTHO05D000923 6.5e-47 191.4 173 54.3
BraA08t32540Z Brassica rapa HOM05D001092 ORTHO05D000923 6.5e-47 191.4 173 54.3
CARHR037730 Cardamine hirsuta HOM05D001092 ORTHO05D000923 6.5e-47 191.4 173 53.8
AL1G54650 Arabidopsis lyrata HOM05D001092 ORTHO05D000923 8.5e-47 191.0 173 54.3
AT1G48090 Arabidopsis thaliana HOM05D001092 ORTHO05D000923 8.5e-47 191.0 173 53.2
AUR62038227 Chenopodium quinoa HOM05D001092 ORTHO05D000923 8.5e-47 191.0 173 54.3
Aa31LG10G5640 Aethionema arabicum HOM05D001092 ORTHO05D000923 1.1e-46 190.7 176 53.4
BcaB07g33792 Brassica carinata HOM05D001092 ORTHO05D000923 1.1e-46 190.7 173 53.8
MELO3C006741.2 Cucumis melo HOM05D001092 ORTHO05D000923 1.4e-46 190.3 173 53.2
Thhalv10011170m.g Eutrema salsugineum HOM05D001092 ORTHO05D000923 1.4e-46 190.3 173 53.8
BcaB04g17465 Brassica carinata HOM05D001092 ORTHO05D000923 5.5e-46 188.3 173 53.2
EL10Ac6g15714 Beta vulgaris HOM05D001092 ORTHO05D000923 2.7e-45 186.0 173 52.0
ATR1145G101 Amborella trichopoda HOM05D001092 ORTHO05D000923 3.6e-45 185.7 173 50.9
Nn2g14503 Nelumbo nucifera HOM05D001092 ORTHO05D000923 7.9e-45 184.5 179 53.1
THA.LOC104802610 Tarenaya hassleriana HOM05D001092 ORTHO05D000923 3.0e-44 182.6 173 50.3
Nn2g14501 Nelumbo nucifera HOM05D001092 ORTHO05D000923 5.1e-44 181.8 179 52.0
Ca_21396_v3 Cicer arietinum L. HOM05D001092 ORTHO05D000923 7.4e-43 177.9 153 54.2
Sp1g35040 Schrenkiella parvula HOM05D001092 ORTHO05D000923 7.4e-43 177.9 175 52.0
HPP92_008100 Vanilla planifolia HOM05D001092 ORTHO05D000923 9.7e-43 177.6 171 50.3
BolC8t47372H Brassica oleracea HOM05D001092 ORTHO05D000923 1.7e-42 176.8 208 45.7
DCAR_026963 Daucus carota HOM05D001092 ORTHO05D000923 1.7e-42 176.8 176 50.0
Sc03g0001750 Simmondsia chinensis HOM05D001092 ORTHO05D000923 1.1e-41 174.1 176 47.2
Lsat_1_v5_gn_1_40321 Lactuca sativa HOM05D001092 ORTHO05D000923 3.4e-40 169.1 172 49.4
CDE02G1757 Ceratophyllum demersum HOM05D001092 ORTHO05D000923 3.8e-39 165.6 179 45.3
MD16G1156400 Malus domestica HOM05D001092 ORTHO05D000923 3.1e-33 146.0 119 58.0
ATR1145G054 Amborella trichopoda HOM05D001092 ORTHO05D000923 1.9e-30 136.7 92 63.0
SHI00081 Sapria himalayana HOM05D001092 ORTHO05D000923 9.4e-30 134.4 177 42.9
SEGI_28116 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 8.8e-28 127.9 180 40.6
SEGI_33370 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 8.8e-28 127.9 180 40.6
SMO340G0042 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 4.1e-25 119.0 174 36.2
SMO240G0011 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 5.3e-25 118.6 174 36.2
Pp3c9_20320 Physcomitrium patens HOM05D001092 ORTHO05D000923 9.1e-25 117.9 170 37.1
Mapoly0076s0036 Marchantia polymorpha HOM05D001092 ORTHO05D000923 2.2e-23 113.2 176 36.4
Mapoly0037s0053 Marchantia polymorpha HOM05D001092 ORTHO05D000923 1.5e-22 110.5 176 35.8
AagrBONN_evm.TU.Sc2ySwM_362.1818 Anthoceros agrestis HOM05D001092 ORTHO05D000923 2.5e-22 109.8 174 37.4
CBR_g4878 Chara braunii HOM05D001092 ORTHO05D000923 4.5e-16 89.0 177 31.6
Sed0007068 Sechium edule HOM05D001092 ORTHO05D000923 6.5e-15 85.1 162 29.0
Pp3c22_21110 Physcomitrium patens HOM05D001092 ORTHO05D000923 1.5e-14 84.0 162 28.4
AagrBONN_evm.TU.Sc2ySwM_362.876 Anthoceros agrestis HOM05D001092 ORTHO05D000923 5.5e-14 82.0 179 29.6
Haze_08330 Corylus avellana HOM05D001092 ORTHO05D000923 3.6e-13 79.3 176 26.1
ClCG09G012520 Citrullus lanatus HOM05D001092 ORTHO05D000923 6.1e-13 78.6 162 27.8
CsaV3_3G049680 Cucumis sativus L. HOM05D001092 ORTHO05D000923 8.0e-13 78.2 159 26.4
TWI60G0589 Tripterygium wilfordii HOM05D001092 ORTHO05D000923 8.0e-13 78.2 179 25.1
TPR.G33938 Trifolium pratense HOM05D001092 ORTHO05D000923 1.0e-12 77.8 177 28.2
Cfa012359 Carpinus fangiana HOM05D001092 ORTHO05D000923 1.4e-12 77.4 176 26.1
RcHm_v2.0_Chr7g0207821 Rosa chinensis HOM05D001092 ORTHO05D000923 2.3e-12 76.6 177 26.0
CiPaw.12G058300 Carya illinoinensis HOM05D001092 ORTHO05D000923 5.2e-12 75.5 179 24.0
MD04G1057200 Malus domestica HOM05D001092 ORTHO05D000923 5.2e-12 75.5 177 25.4
FAN08G1156 Fragaria x ananassa HOM05D001092 ORTHO05D000923 1.2e-11 74.3 177 25.4
MD06G1043800 Malus domestica HOM05D001092 ORTHO05D000923 2.0e-11 73.6 181 23.8
Ca_26022_v3 Cicer arietinum L. HOM05D001092 ORTHO05D000923 2.6e-11 73.2 177 27.7
Aqoxy322s002 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 3.4e-11 72.8 45 62.2
FAN04G0578 Fragaria x ananassa HOM05D001092 ORTHO05D000923 4.4e-11 72.4 177 26.0
FvH4_5g20820 Fragaria vesca HOM05D001092 ORTHO05D000923 5.7e-11 72.0 177 24.3
CANSAT21G2480 Cannabis sativa HOM05D001092 ORTHO05D000923 7.5e-11 71.6 161 28.6
Aqoxy322s001 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 1.3e-10 70.9 61 52.5
Psat2g175240 Pisum sativum HOM05D001092 ORTHO05D000923 2.8e-10 69.7 177 27.1
Medtr5g013780 Medicago truncatula HOM05D001092 ORTHO05D000923 3.7e-10 69.3 177 26.6
Aqoxy3G02588 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 4.9e-10 68.9 161 26.7
Glyma.11G039900 Glycine max HOM05D001092 ORTHO05D000923 6.3e-10 68.6 177 27.1
TAR629G2120 Trochodendron aralioides HOM05D001092 ORTHO05D000923 1.4e-09 67.4 177 24.9
FAN18G3751 Fragaria x ananassa HOM05D001092 ORTHO05D000923 1.8e-09 67.0 178 24.2
Manes.17G019783 Manihot esculenta HOM05D001092 ORTHO05D000923 2.4e-09 66.6 178 27.0
HPP92_014878 Vanilla planifolia HOM05D001092 ORTHO05D000923 3.1e-09 66.2 160 28.8
Phvul.002G003000 Phaseolus vulgaris HOM05D001092 ORTHO05D000923 7.0e-09 65.1 173 26.6
Lj2g0026983 Lotus japonicus HOM05D001092 ORTHO05D000923 1.6e-08 63.9 177 25.4
CAN.G1445.6 Capsicum annuum HOM05D001092 ORTHO05D000923 3.8e-07 59.3 171 24.0
SEGI_19754 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 3.3e-06 56.2 79 39.2
Actinidia18468 Actinidia chinensis HOM05D001092 ORTHO05D000923 4.3e-06 55.8 61 45.9
SEGI_02242 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 5.6e-06 55.5 61 37.7
HPP92_014922 Vanilla planifolia HOM05D001092 ORTHO05D000923 7.3e-06 55.1 71 35.2


User provided reference genes

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