Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 9.1e-251 869.8 441 100.0
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 4.4e-80 302.8 514 41.8
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 2.3e-76 290.4 518 41.5
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 8.1e-74 282.0 502 39.8
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 3.5e-69 266.5 518 39.6
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 8.1e-66 255.4 513 38.4
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 1.5e-64 251.1 439 40.8
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 4.9e-63 246.1 512 37.3
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 1.4e-62 244.6 509 37.7
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 1.4e-62 244.6 512 36.5
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 3.2e-62 243.4 516 37.2
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 2.7e-61 240.4 520 38.3
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 3.0e-60 236.9 520 36.9
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 2.5e-59 233.8 450 38.9
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 3.3e-59 233.4 518 37.6
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 7.4e-59 232.3 516 37.8
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 2.9e-55 220.3 463 36.1
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 1.1e-54 218.4 514 35.0
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 1.9e-54 217.6 497 36.2
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 7.2e-54 215.7 509 35.6
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 7.2e-54 215.7 509 35.6
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.2e-53 214.9 509 35.4
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 6.1e-53 212.6 511 34.2
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 3.9e-52 209.9 511 34.8
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 6.7e-52 209.1 506 35.4
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 1.1e-51 208.4 507 34.5
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 6.9e-49 199.1 445 34.6
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 1.2e-48 198.4 512 32.8
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 2.6e-48 197.2 450 34.7
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 3.4e-48 196.8 484 35.3
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 1.0e-47 195.3 518 32.6
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 5.0e-47 193.0 483 34.2
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 2.1e-45 187.6 513 31.0
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 2.1e-45 187.6 444 34.9
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 3.6e-45 186.8 511 33.3
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 7.9e-45 185.7 526 33.5
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 1.0e-44 185.3 483 33.3
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 1.4e-44 184.9 532 32.1
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 1.4e-44 184.9 318 42.1
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 1.4e-44 184.9 515 33.4
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 1.8e-44 184.5 452 34.1
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 1.8e-44 184.5 503 34.0
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 3.0e-44 183.7 506 31.4
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 5.1e-44 183.0 414 33.1
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 6.7e-44 182.6 452 33.8
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 6.7e-44 182.6 515 32.6
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 8.8e-44 182.2 452 34.5
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 2.0e-43 181.0 480 32.3
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 2.5e-43 180.6 514 34.0
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 3.3e-43 180.3 442 33.3
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 7.4e-43 179.1 476 31.3
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 1.8e-41 174.5 489 30.5
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 1.8e-41 174.5 483 30.4
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 3.4e-40 170.2 319 37.0
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 2.9e-39 167.2 499 31.1
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 8.5e-39 165.6 350 36.3
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 1.1e-38 165.2 513 29.8
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 1.4e-38 164.9 459 32.5
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 1.9e-38 164.5 540 29.8
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 4.2e-38 163.3 410 33.9
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 5.5e-38 162.9 404 33.9
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 1.2e-37 161.8 549 30.1
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 1.6e-37 161.4 419 34.1
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 1.6e-37 161.4 399 34.6
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 2.1e-37 161.0 550 27.1
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 3.6e-37 160.2 498 29.5
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 6.1e-37 159.5 515 30.9
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 1.0e-36 158.7 517 30.0
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 1.8e-36 157.9 329 35.9
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 3.0e-36 157.1 126 63.5
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 3.0e-36 157.1 110 66.4
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 5.1e-36 156.4 466 31.8
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 5.1e-36 156.4 437 33.2
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 1.5e-35 154.8 462 30.3
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 2.0e-35 154.5 519 28.7
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 5.7e-35 152.9 526 30.0
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 9.7e-35 152.1 109 66.1
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 3.7e-34 150.2 540 28.0
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 2.4e-33 147.5 116 62.9
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 7.0e-33 146.0 492 30.7
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 1.5e-32 144.8 295 36.6
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 2.0e-32 144.4 282 37.2
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 3.5e-32 143.7 439 30.8
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 1.7e-31 141.4 116 61.2
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 2.2e-31 141.0 469 29.6
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 2.2e-31 141.0 305 36.1
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 3.8e-31 140.2 527 26.9
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 8.5e-31 139.0 115 58.3
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 8.5e-31 139.0 122 59.8
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 1.5e-30 138.3 485 29.7
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 1.5e-30 138.3 382 30.1
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 1.9e-30 137.9 291 36.8
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 1.9e-30 137.9 291 36.8
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 1.9e-30 137.9 291 36.8
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 4.2e-30 136.7 299 36.1
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 4.2e-30 136.7 299 36.1
MSTRG.5009 Avicennia marina HOM05D006280 ORTHO05D007876 1.2e-29 135.2 255 37.3
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 4.7e-29 133.3 445 28.8
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 1.4e-28 131.7 445 29.7
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 1.8e-28 131.3 424 29.5
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 2.0e-27 127.9 459 29.4
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 4.4e-27 126.7 450 30.0
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 4.8e-26 123.2 128 54.7
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 9.1e-25 119.0 259 36.7
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 2.5e-22 110.9 567 27.0
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 4.2e-22 110.2 80 61.2
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 5.5e-22 109.8 388 28.6
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 3.6e-21 107.1 311 28.9
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 8.0e-21 105.9 75 65.3
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.4e-20 105.1 101 54.5
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 1.8e-20 104.8 79 57.0
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 3.0e-20 104.0 469 27.7
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 5.7e-19 99.8 292 32.9
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 1.3e-18 98.6 262 35.1
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 4.4e-11 73.6 167 34.7
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 1.1e-09 68.9 139 33.8
DCAR_006240 Daucus carota HOM05D006280 ORTHO05D007876 1.8e-09 68.2 248 30.2
Manes.07G004300 Manihot esculenta HOM05D006280 ORTHO05D007876 5.6e-06 56.6 225 28.4


User provided reference genes

Program Settings