Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3099 Utricularia gibba HOM05D004458 ORTHO05D005455 2.2e-111 405.6 203 100.0
unitig_8.g3100 Utricularia gibba HOM05D004458 ORTHO05D005455 1.5e-70 270.0 199 69.8
Migut.G00023 Erythranthe guttata HOM05D004458 ORTHO05D005455 2.5e-62 242.7 199 62.3
Solyc12g099110.2 Solanum lycopersicum HOM05D004458 ORTHO05D005455 1.4e-60 236.9 169 71.6
Nitab4.5_0000186g0060 Nicotiana tabacum HOM05D004458 ORTHO05D005455 1.8e-60 236.5 199 62.3
Nitab4.5_0004298g0040 Nicotiana tabacum HOM05D004458 ORTHO05D005455 1.8e-60 236.5 169 71.0
MSTRG.24833 Avicennia marina HOM05D004458 ORTHO05D005455 8.9e-60 234.2 199 60.8
Sopen12g033820 Solanum pennellii HOM05D004458 ORTHO05D005455 1.2e-59 233.8 169 70.4
PGSC0003DMG400004609 Solanum tuberosum HOM05D004458 ORTHO05D005455 1.3e-58 230.3 169 68.6
Sopen01g023160 Solanum pennellii HOM05D004458 ORTHO05D005455 2.2e-58 229.6 161 71.4
PGSC0003DMG400001233 Solanum tuberosum HOM05D004458 ORTHO05D005455 2.2e-58 229.6 161 71.4
Solyc01g057830.3 Solanum lycopersicum HOM05D004458 ORTHO05D005455 2.9e-58 229.2 161 71.4
MSTRG.10175 Avicennia marina HOM05D004458 ORTHO05D005455 4.9e-58 228.4 171 67.8
Lsat_1_v5_gn_6_69461 Lactuca sativa HOM05D004458 ORTHO05D005455 4.9e-58 228.4 199 59.3
CAN.G14.37 Capsicum annuum HOM05D004458 ORTHO05D005455 8.4e-58 227.6 167 66.5
CsaV3_3G015350 Cucumis sativus L. HOM05D004458 ORTHO05D005455 1.6e-56 223.4 170 65.3
HanXRQChr11g0353951 Helianthus annuus HOM05D004458 ORTHO05D005455 1.6e-56 223.4 166 66.9
Actinidia31582 Actinidia chinensis HOM05D004458 ORTHO05D005455 2.1e-56 223.0 166 65.1
MELO3C006733.2 Cucumis melo HOM05D004458 ORTHO05D005455 2.1e-56 223.0 171 64.9
Actinidia18482 Actinidia chinensis HOM05D004458 ORTHO05D005455 3.5e-56 222.2 163 66.3
SalBow8G3582 Salvia bowleyana HOM05D004458 ORTHO05D005455 7.8e-56 221.1 168 66.1
Lsat_1_v5_gn_1_40241 Lactuca sativa HOM05D004458 ORTHO05D005455 1.0e-55 220.7 199 58.8
Atru.chr4.3103 Acer truncatum HOM05D004458 ORTHO05D005455 1.7e-55 219.9 200 58.0
Manes.15G003100 Manihot esculenta HOM05D004458 ORTHO05D005455 1.7e-55 219.9 167 65.3
CAN.G484.78 Capsicum annuum HOM05D004458 ORTHO05D005455 3.9e-55 218.8 169 63.3
Dinv15126 Davidia involucrata HOM05D004458 ORTHO05D005455 5.1e-55 218.4 169 63.3
MBI19_g32690_MAGBIO Magnolia biondii HOM05D004458 ORTHO05D005455 6.6e-55 218.0 164 66.5
ATR0693G312 Amborella trichopoda HOM05D004458 ORTHO05D005455 1.1e-54 217.2 170 61.2
ClCG05G006720 Citrullus lanatus HOM05D004458 ORTHO05D005455 1.5e-54 216.9 169 63.3
THA.LOC104818863 Tarenaya hassleriana HOM05D004458 ORTHO05D005455 1.5e-54 216.9 162 65.4
Ah.07g203910 Amaranthus hybridus HOM05D004458 ORTHO05D005455 1.9e-54 216.5 167 62.9
Dinv44245 Davidia involucrata HOM05D004458 ORTHO05D005455 1.9e-54 216.5 199 58.3
TWI09G1490 Tripterygium wilfordii HOM05D004458 ORTHO05D005455 1.9e-54 216.5 167 62.9
Aa31LG11G8410 Aethionema arabicum HOM05D004458 ORTHO05D005455 2.5e-54 216.1 169 64.5
Sed0009218 Sechium edule HOM05D004458 ORTHO05D005455 4.3e-54 215.3 172 59.9
Cfa015690 Carpinus fangiana HOM05D004458 ORTHO05D005455 5.6e-54 214.9 162 64.8
AT5G30510 Arabidopsis thaliana HOM05D004458 ORTHO05D005455 9.6e-54 214.2 164 65.2
AUR62002594 Chenopodium quinoa HOM05D004458 ORTHO05D005455 9.6e-54 214.2 165 64.2
AUR62030017 Chenopodium quinoa HOM05D004458 ORTHO05D005455 9.6e-54 214.2 165 64.2
A06p38180 Brassica napus HOM05D004458 ORTHO05D005455 1.3e-53 213.8 164 65.2
BraA06t26733Z Brassica rapa HOM05D004458 ORTHO05D005455 1.3e-53 213.8 164 65.2
CARHR185550 Cardamine hirsuta HOM05D004458 ORTHO05D005455 1.3e-53 213.8 164 65.2
ECA233G6062 Erigeron canadensis HOM05D004458 ORTHO05D005455 1.3e-53 213.8 199 56.3
BcaB04g19641 Brassica carinata HOM05D004458 ORTHO05D005455 1.6e-53 213.4 164 65.2
BcaNung02119 Brassica carinata HOM05D004458 ORTHO05D005455 1.6e-53 213.4 164 65.2
A09p05060 Brassica napus HOM05D004458 ORTHO05D005455 1.6e-53 213.4 164 65.2
C07p40030 Brassica napus HOM05D004458 ORTHO05D005455 1.6e-53 213.4 164 65.2
BolC7t44537H Brassica oleracea HOM05D004458 ORTHO05D005455 1.6e-53 213.4 164 65.2
BraA09t36145Z Brassica rapa HOM05D004458 ORTHO05D005455 1.6e-53 213.4 164 65.2
Hma1.2p1_1096F.1_g256640 Hydrangea macrophylla HOM05D004458 ORTHO05D005455 1.6e-53 213.4 199 56.8
QL06p013334 Quercus lobata HOM05D004458 ORTHO05D005455 1.6e-53 213.4 161 65.2
BcaC04g23713 Brassica carinata HOM05D004458 ORTHO05D005455 2.1e-53 213.0 164 64.6
BcaC06g30694 Brassica carinata HOM05D004458 ORTHO05D005455 2.1e-53 213.0 163 64.4
C09p05470 Brassica napus HOM05D004458 ORTHO05D005455 2.1e-53 213.0 164 64.6
BolC9t53476H Brassica oleracea HOM05D004458 ORTHO05D005455 2.1e-53 213.0 164 64.6
CiPaw.02G072000 Carya illinoinensis HOM05D004458 ORTHO05D005455 2.8e-53 212.6 199 57.3
arahy.Tifrunner.gnm1.ann1.2F4DQW Arachis hypogaea HOM05D004458 ORTHO05D005455 4.8e-53 211.8 164 65.2
arahy.Tifrunner.gnm1.ann1.NS41IF Arachis hypogaea HOM05D004458 ORTHO05D005455 4.8e-53 211.8 164 65.2
Potri.008G101100 Populus trichocarpa HOM05D004458 ORTHO05D005455 4.8e-53 211.8 199 55.8
Sp2g19940 Schrenkiella parvula HOM05D004458 ORTHO05D005455 4.8e-53 211.8 164 64.6
CANSAT78G1602 Cannabis sativa HOM05D004458 ORTHO05D005455 6.2e-53 211.5 167 62.9
Carub.0020s0005 Capsella rubella HOM05D004458 ORTHO05D005455 8.1e-53 211.1 164 64.0
TWI53G1192 Tripterygium wilfordii HOM05D004458 ORTHO05D005455 8.1e-53 211.1 166 62.7
TAR362G1183 Trochodendron aralioides HOM05D004458 ORTHO05D005455 8.1e-53 211.1 157 65.0
AL6G41130 Arabidopsis lyrata HOM05D004458 ORTHO05D005455 1.1e-52 210.7 164 64.0
EL10Ac3g06292 Beta vulgaris HOM05D004458 ORTHO05D005455 1.1e-52 210.7 165 64.2
Cpa.g.sc146.69 Carica papaya HOM05D004458 ORTHO05D005455 1.1e-52 210.7 202 55.4
Thhalv10004302m.g Eutrema salsugineum HOM05D004458 ORTHO05D005455 1.1e-52 210.7 164 64.0
Gohir.D02G061500 Gossypium hirsutum HOM05D004458 ORTHO05D005455 1.1e-52 210.7 161 65.2
CSS0034217 Camellia sinensis var. sinensis HOM05D004458 ORTHO05D005455 1.4e-52 210.3 149 67.8
Sabra08G0076400 Salix brachista HOM05D004458 ORTHO05D005455 1.4e-52 210.3 199 54.8
CDE05G1409 Ceratophyllum demersum HOM05D004458 ORTHO05D005455 1.8e-52 209.9 163 61.3
Gohir.A02G056300 Gossypium hirsutum HOM05D004458 ORTHO05D005455 2.4e-52 209.5 161 65.2
Gorai.005G069200 Gossypium raimondii HOM05D004458 ORTHO05D005455 2.4e-52 209.5 161 65.2
Nn3g21829 Nelumbo nucifera HOM05D004458 ORTHO05D005455 2.4e-52 209.5 200 56.0
Aqoxy2G02626 Aquilegia oxysepala HOM05D004458 ORTHO05D005455 3.1e-52 209.1 157 63.1
CiPaw.01G133400 Carya illinoinensis HOM05D004458 ORTHO05D005455 3.1e-52 209.1 161 63.4
Eucgr.H04084 Eucalyptus grandis HOM05D004458 ORTHO05D005455 3.1e-52 209.1 164 62.8
PSO210G2951 Papaver somniferum HOM05D004458 ORTHO05D005455 3.1e-52 209.1 157 64.3
PSO761G0404 Papaver somniferum HOM05D004458 ORTHO05D005455 3.1e-52 209.1 157 64.3
Thecc.04G307500 Theobroma cacao HOM05D004458 ORTHO05D005455 4.0e-52 208.8 149 67.8
GSVIVG01034940001 Vitis vinifera HOM05D004458 ORTHO05D005455 4.0e-52 208.8 161 65.2
arahy.Tifrunner.gnm1.ann1.C83F23 Arachis hypogaea HOM05D004458 ORTHO05D005455 6.9e-52 208.0 166 60.8
PGR004G0801 Punica granatum HOM05D004458 ORTHO05D005455 9.0e-52 207.6 166 60.8
arahy.Tifrunner.gnm1.ann1.G3761Q Arachis hypogaea HOM05D004458 ORTHO05D005455 1.2e-51 207.2 165 60.6
MD13G1147900 Malus domestica HOM05D004458 ORTHO05D005455 1.2e-51 207.2 157 64.3
MD16G1147700 Malus domestica HOM05D004458 ORTHO05D005455 1.2e-51 207.2 157 64.3
Potri.010G150300 Populus trichocarpa HOM05D004458 ORTHO05D005455 1.2e-51 207.2 190 55.8
CDE11G1204 Ceratophyllum demersum HOM05D004458 ORTHO05D005455 1.5e-51 206.8 157 65.0
DCAR_023377 Daucus carota HOM05D004458 ORTHO05D005455 1.5e-51 206.8 161 63.4
unitig_22.g6348 Utricularia gibba HOM05D004458 ORTHO05D005455 2.0e-51 206.5 126 80.2
Duzib212G0400 Durio zibethinus HOM05D004458 ORTHO05D005455 2.6e-51 206.1 161 62.1
Cc03_g00460 Coffea canephora HOM05D004458 ORTHO05D005455 3.4e-51 205.7 163 64.4
COL.COLO4_34557 Corchorus olitorius HOM05D004458 ORTHO05D005455 7.6e-51 204.5 149 65.1
Lj6g0001722 Lotus japonicus HOM05D004458 ORTHO05D005455 9.9e-51 204.1 162 61.7
Phvul.003G118600 Phaseolus vulgaris HOM05D004458 ORTHO05D005455 2.2e-50 203.0 165 61.8
Sc25g0001600 Simmondsia chinensis HOM05D004458 ORTHO05D005455 3.8e-50 202.2 165 60.6
Glyma.09G031800 Glycine max HOM05D004458 ORTHO05D005455 4.9e-50 201.8 147 63.9
Prupe.1G111400 Prunus persica HOM05D004458 ORTHO05D005455 4.9e-50 201.8 167 59.9
TAR636G0490 Trochodendron aralioides HOM05D004458 ORTHO05D005455 8.4e-50 201.1 199 52.3
Ca_00945_v3 Cicer arietinum L. HOM05D004458 ORTHO05D005455 1.1e-49 200.7 152 61.2
Lalb_Chr20g0120631 Lupinus albus HOM05D004458 ORTHO05D005455 1.9e-49 199.9 163 59.5
Glyma.15G136800 Glycine max HOM05D004458 ORTHO05D005455 3.2e-49 199.1 169 56.2
arahy.Tifrunner.gnm1.ann1.PZ9WPP Arachis hypogaea HOM05D004458 ORTHO05D005455 4.2e-49 198.7 176 56.8
Glyma.17G037700 Glycine max HOM05D004458 ORTHO05D005455 5.4e-49 198.4 147 62.6
Phvul.006G121100 Phaseolus vulgaris HOM05D004458 ORTHO05D005455 2.1e-48 196.4 165 57.6
SGA_v2.0_scaffold157G37359 Striga asiatica HOM05D004458 ORTHO05D005455 4.6e-48 195.3 226 51.3
VMungo0540G1791 Vigna mungo HOM05D004458 ORTHO05D005455 4.6e-48 195.3 164 59.1
Lalb_Chr15g0089031 Lupinus albus HOM05D004458 ORTHO05D005455 1.3e-47 193.7 163 58.3
Peaxi162Scf00126g01416 Petunia axillaris HOM05D004458 ORTHO05D005455 1.3e-47 193.7 168 63.1
Medtr2g033020 Medicago truncatula HOM05D004458 ORTHO05D005455 2.3e-47 193.0 147 59.9
FvH4_4g20780 Fragaria vesca HOM05D004458 ORTHO05D005455 3.9e-47 192.2 157 57.3
FAN07G1987 Fragaria x ananassa HOM05D004458 ORTHO05D005455 3.9e-47 192.2 157 57.3
FAN17G0333 Fragaria x ananassa HOM05D004458 ORTHO05D005455 3.9e-47 192.2 157 57.3
RcHm_v2.0_Chr4g0426221 Rosa chinensis HOM05D004458 ORTHO05D005455 5.1e-47 191.8 157 57.3
FAN12G4036 Fragaria x ananassa HOM05D004458 ORTHO05D005455 6.6e-47 191.4 186 51.1
Hund12232 Selenicereus undatus HOM05D004458 ORTHO05D005455 6.6e-47 191.4 176 55.1
Sed0000500 Sechium edule HOM05D004458 ORTHO05D005455 2.5e-46 189.5 161 59.0
Duzib052G0436 Durio zibethinus HOM05D004458 ORTHO05D005455 3.3e-46 189.1 154 59.7
MELO3C025002.2 Cucumis melo HOM05D004458 ORTHO05D005455 7.3e-46 188.0 163 58.9
Ca_00951_v3 Cicer arietinum L. HOM05D004458 ORTHO05D005455 9.6e-46 187.6 152 59.2
ClCG06G004350 Citrullus lanatus HOM05D004458 ORTHO05D005455 2.1e-45 186.4 164 56.1
Psat1g162760 Pisum sativum HOM05D004458 ORTHO05D005455 3.6e-45 185.7 147 57.1
ClCG08G002550 Citrullus lanatus HOM05D004458 ORTHO05D005455 5.3e-44 181.8 149 62.4
vmacro07975 Vaccinium macrocarpon HOM05D004458 ORTHO05D005455 2.0e-43 179.9 161 53.4
Ciclev10005364m.g Citrus clementina HOM05D004458 ORTHO05D005455 3.4e-43 179.1 126 68.3
Rhsim04G0243100 Rhododendron simsii HOM05D004458 ORTHO05D005455 4.5e-43 178.7 191 47.6
Os03g0315800 Oryza sativa ssp. japonica HOM05D004458 ORTHO05D005455 2.2e-42 176.4 149 55.0
Sed0002093 Sechium edule HOM05D004458 ORTHO05D005455 2.2e-42 176.4 169 53.8
Lalb_Chr07g0181881 Lupinus albus HOM05D004458 ORTHO05D005455 4.9e-42 175.3 168 52.4
Sabra10G0115700 Salix brachista HOM05D004458 ORTHO05D005455 4.9e-42 175.3 161 56.5
Zm00001eb395590 Zea mays HOM05D004458 ORTHO05D005455 4.9e-42 175.3 152 55.3
Haze_00830 Corylus avellana HOM05D004458 ORTHO05D005455 6.4e-42 174.9 182 52.7
arahy.Tifrunner.gnm1.ann1.QN1HMQ Arachis hypogaea HOM05D004458 ORTHO05D005455 8.4e-42 174.5 126 64.3
TPR.G10105 Trifolium pratense HOM05D004458 ORTHO05D005455 8.4e-42 174.5 152 53.3
VMungo1215G2486 Vigna mungo HOM05D004458 ORTHO05D005455 3.2e-41 172.6 126 65.9
Mapoly0018s0004 Marchantia polymorpha HOM05D004458 ORTHO05D005455 1.1e-36 157.5 160 47.5
Sed0001457 Sechium edule HOM05D004458 ORTHO05D005455 6.9e-36 154.8 145 55.9
AagrBONN_evm.TU.Sc2ySwM_368.2766 Anthoceros agrestis HOM05D004458 ORTHO05D005455 1.0e-34 151.0 185 42.2
DCAR_026966 Daucus carota HOM05D004458 ORTHO05D005455 1.4e-33 147.1 99 71.7
DCAR_026969 Daucus carota HOM05D004458 ORTHO05D005455 1.4e-33 147.1 99 71.7
Pp3c20_22450 Physcomitrium patens HOM05D004458 ORTHO05D005455 2.5e-33 146.4 147 44.9
Pp3c10_21790 Physcomitrium patens HOM05D004458 ORTHO05D005455 1.2e-32 144.1 147 44.9
Lj3A836T25 Lonicera japonica HOM05D004458 ORTHO05D005455 1.3e-31 140.6 100 65.0
DCAR_002527 Daucus carota HOM05D004458 ORTHO05D005455 3.0e-31 139.4 100 66.0
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 2.4e-28 129.8 119 55.5
SMO146G0227 Selaginella moellendorffii HOM05D004458 ORTHO05D005455 1.5e-27 127.1 142 43.7
BcaB07g34167 Brassica carinata HOM05D004458 ORTHO05D005455 7.6e-27 124.8 102 63.7
CBR_g34276 Chara braunii HOM05D004458 ORTHO05D005455 4.2e-25 119.0 173 36.4
Oeu052155.2 Olea europaea HOM05D004458 ORTHO05D005455 1.9e-17 93.6 106 52.8
PRCOL_00002737 Prasinoderma coloniale HOM05D004458 ORTHO05D005455 7.2e-17 91.7 120 39.2
HPP92_001941 Vanilla planifolia HOM05D004458 ORTHO05D005455 7.2e-17 91.7 121 44.6
Cre09.g394750 Chlamydomonas reinhardtii HOM05D004458 ORTHO05D005455 3.6e-16 89.4 122 39.3
MCO03G484 Micromonas commoda HOM05D004458 ORTHO05D005455 5.7e-14 82.0 174 30.5
Cfa015692 Carpinus fangiana HOM05D004458 ORTHO05D005455 9.1e-12 74.7 64 57.8
VMungo1215G3325 Vigna mungo HOM05D004458 ORTHO05D005455 1.1e-09 67.8 48 62.5


User provided reference genes

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