Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_750.g28512 Utricularia gibba HOM05D003766 ORTHO05D004607 0.0e+00 1386.7 806 100.0
SalBow7G0490 Salvia bowleyana HOM05D003766 ORTHO05D004607 1.7e-242 843.2 680 79.1
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 1.4e-241 840.1 698 77.2
Migut.I00296 Erythranthe guttata HOM05D003766 ORTHO05D004607 5.9e-240 834.7 679 78.5
MSTRG.11305 Avicennia marina HOM05D003766 ORTHO05D004607 1.3e-234 817.0 698 75.9
DCAR_029422 Daucus carota HOM05D003766 ORTHO05D004607 3.7e-218 762.3 676 73.5
TWI60G0360 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 6.4e-218 761.5 677 74.6
Actinidia09075 Actinidia chinensis HOM05D003766 ORTHO05D004607 2.5e-214 749.6 678 74.0
CAN.G843.53 Capsicum annuum HOM05D003766 ORTHO05D004607 4.3e-214 748.8 680 72.6
Cpa.g.sc3.393 Carica papaya HOM05D003766 ORTHO05D004607 1.4e-212 743.8 677 72.5
MBI19_g04409_MAGBIO Magnolia biondii HOM05D003766 ORTHO05D004607 3.1e-212 742.7 675 71.3
Ciclev10007659m.g Citrus clementina HOM05D003766 ORTHO05D004607 4.4e-211 738.8 655 71.9
Eucgr.B00997 Eucalyptus grandis HOM05D003766 ORTHO05D004607 8.4e-210 734.6 668 72.2
Thhalv10006987m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 3.2e-209 732.6 663 71.2
TWI81G0458 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 2.7e-208 729.6 676 71.2
Lj4g0008657 Lotus japonicus HOM05D003766 ORTHO05D004607 3.5e-208 729.2 671 71.4
Rhsim08G0126600 Rhododendron simsii HOM05D003766 ORTHO05D004607 7.8e-208 728.0 698 66.2
THA.LOC104813927 Tarenaya hassleriana HOM05D003766 ORTHO05D004607 1.3e-207 727.2 666 72.1
Carub.0001s1787 Capsella rubella HOM05D003766 ORTHO05D004607 1.7e-207 726.9 663 70.9
CARHR018810 Cardamine hirsuta HOM05D003766 ORTHO05D004607 1.7e-207 726.9 664 70.9
Manes.06G005800 Manihot esculenta HOM05D003766 ORTHO05D004607 3.9e-207 725.7 667 71.8
BcaB07g31816 Brassica carinata HOM05D003766 ORTHO05D004607 4.3e-206 722.2 663 70.9
BcaC05g25719 Brassica carinata HOM05D003766 ORTHO05D004607 5.6e-206 721.8 663 70.9
BolC5t30350H Brassica oleracea HOM05D003766 ORTHO05D004607 5.6e-206 721.8 663 71.0
Lj5C158T14 Lonicera japonica HOM05D003766 ORTHO05D004607 5.6e-206 721.8 687 70.9
AL1G30630 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 7.3e-206 721.5 650 71.7
C05p16530 Brassica napus HOM05D003766 ORTHO05D004607 7.3e-206 721.5 663 70.9
Aa31LG4G3770 Aethionema arabicum HOM05D003766 ORTHO05D004607 9.6e-206 721.1 668 70.4
Sp1g16220 Schrenkiella parvula HOM05D003766 ORTHO05D004607 1.3e-205 720.7 689 68.8
A06p14270 Brassica napus HOM05D003766 ORTHO05D004607 1.6e-205 720.3 663 70.9
BraA06t24556Z Brassica rapa HOM05D003766 ORTHO05D004607 1.6e-205 720.3 663 70.9
ECA232G0010 Erigeron canadensis HOM05D003766 ORTHO05D004607 6.2e-205 718.4 651 72.8
Psat4g000160 Pisum sativum HOM05D003766 ORTHO05D004607 1.1e-204 717.6 677 69.3
AT1G18260 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 6.9e-204 714.9 650 71.1
Aa31LG7G2830 Aethionema arabicum HOM05D003766 ORTHO05D004607 2.0e-203 713.4 673 69.1
Cc04_g06210 Coffea canephora HOM05D003766 ORTHO05D004607 9.9e-203 711.1 569 81.2
Duzib068G0750 Durio zibethinus HOM05D003766 ORTHO05D004607 3.2e-201 706.1 665 70.7
Sopen03g037630 Solanum pennellii HOM05D003766 ORTHO05D004607 4.6e-200 702.2 678 70.4
Dinv04134 Davidia involucrata HOM05D003766 ORTHO05D004607 2.3e-199 699.9 625 73.9
CSS0048248 Camellia sinensis var. sinensis HOM05D003766 ORTHO05D004607 1.5e-198 697.2 664 69.6
Oeu015089.1 Olea europaea HOM05D003766 ORTHO05D004607 1.5e-198 697.2 664 70.9
Thecc.03G055500 Theobroma cacao HOM05D003766 ORTHO05D004607 1.5e-198 697.2 654 70.8
Sed0009438 Sechium edule HOM05D003766 ORTHO05D004607 1.9e-198 696.8 666 70.4
AL2G33320 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 2.5e-198 696.4 671 68.9
Solyc03g118670.3 Solanum lycopersicum HOM05D003766 ORTHO05D004607 2.5e-198 696.4 678 70.4
CARHR066590 Cardamine hirsuta HOM05D003766 ORTHO05D004607 4.3e-198 695.7 676 68.3
Prupe.5G234000 Prunus persica HOM05D003766 ORTHO05D004607 1.3e-197 694.1 669 69.7
Potri.012G046300 Populus trichocarpa HOM05D003766 ORTHO05D004607 1.8e-196 690.3 666 69.7
Atru.chr9.1710 Acer truncatum HOM05D003766 ORTHO05D004607 2.4e-196 689.9 655 69.3
Lalb_Chr09g0330351 Lupinus albus HOM05D003766 ORTHO05D004607 9.0e-196 688.0 664 69.9
Thhalv10018231m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 1.2e-195 687.6 668 68.1
Aqoxy3G00054 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 2.6e-195 686.4 673 65.7
HanXRQChr15g0492431 Helianthus annuus HOM05D003766 ORTHO05D004607 1.3e-194 684.1 648 67.6
ClCG04G010600 Citrullus lanatus HOM05D003766 ORTHO05D004607 2.2e-194 683.3 658 71.0
Oeu046630.1 Olea europaea HOM05D003766 ORTHO05D004607 3.8e-194 682.6 713 57.8
EL10Ac8g19505 Beta vulgaris HOM05D003766 ORTHO05D004607 6.4e-194 681.8 668 68.1
Gohir.D11G002500 Gossypium hirsutum HOM05D003766 ORTHO05D004607 1.1e-193 681.0 667 69.1
MELO3C002135.2 Cucumis melo HOM05D003766 ORTHO05D004607 2.4e-193 679.9 655 70.5
Gorai.007G003500 Gossypium raimondii HOM05D003766 ORTHO05D004607 3.2e-193 679.5 667 69.4
MD14G1236800 Malus domestica HOM05D003766 ORTHO05D004607 3.2e-193 679.5 674 67.8
Potri.015G038100 Populus trichocarpa HOM05D003766 ORTHO05D004607 3.2e-193 679.5 676 68.5
CsaV3_1G007190 Cucumis sativus L. HOM05D003766 ORTHO05D004607 4.2e-193 679.1 677 69.0
PSO017G5688 Papaver somniferum HOM05D003766 ORTHO05D004607 5.4e-193 678.7 680 68.5
Nn3g18290 Nelumbo nucifera HOM05D003766 ORTHO05D004607 2.1e-192 676.8 673 68.1
Gohir.A11G002900 Gossypium hirsutum HOM05D003766 ORTHO05D004607 6.0e-192 675.2 705 67.0
PSO478G2458 Papaver somniferum HOM05D003766 ORTHO05D004607 1.0e-191 674.5 680 67.6
AUR62043006 Chenopodium quinoa HOM05D003766 ORTHO05D004607 1.3e-191 674.1 557 75.8
TAR622G0358 Trochodendron aralioides HOM05D003766 ORTHO05D004607 5.1e-191 672.2 658 64.0
FAN13G1632 Fragaria x ananassa HOM05D003766 ORTHO05D004607 1.1e-190 671.0 672 64.6
HanXRQChr17g0545731 Helianthus annuus HOM05D003766 ORTHO05D004607 7.4e-190 668.3 616 72.2
Sc10g0009160 Simmondsia chinensis HOM05D003766 ORTHO05D004607 9.6e-190 667.9 661 68.5
RcHm_v2.0_Chr7g0178271 Rosa chinensis HOM05D003766 ORTHO05D004607 8.1e-189 664.8 674 59.9
Sabra15G0036800 Salix brachista HOM05D003766 ORTHO05D004607 1.1e-188 664.5 671 68.3
Lsat_1_v5_gn_0_34021 Lactuca sativa HOM05D003766 ORTHO05D004607 5.3e-188 662.1 648 69.4
FAN04G2446 Fragaria x ananassa HOM05D003766 ORTHO05D004607 6.9e-188 661.8 673 67.3
Lalb_Chr05g0221621 Lupinus albus HOM05D003766 ORTHO05D004607 1.2e-187 661.0 668 64.7
arahy.Tifrunner.gnm1.ann1.679W5T Arachis hypogaea HOM05D003766 ORTHO05D004607 1.5e-187 660.6 684 66.8
FvH4_5g17420 Fragaria vesca HOM05D003766 ORTHO05D004607 5.8e-187 658.7 673 67.2
PGR044G0562 Punica granatum HOM05D003766 ORTHO05D004607 1.0e-186 657.9 668 68.4
Ca_17184_v3 Cicer arietinum L. HOM05D003766 ORTHO05D004607 1.3e-186 657.5 665 66.6
FAN08G2416 Fragaria x ananassa HOM05D003766 ORTHO05D004607 1.3e-186 657.5 673 60.8
Hund06721 Selenicereus undatus HOM05D003766 ORTHO05D004607 1.3e-186 657.5 661 67.6
AT1G73570 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 1.7e-186 657.1 667 57.3
FAN18G4514 Fragaria x ananassa HOM05D003766 ORTHO05D004607 2.9e-186 656.4 673 67.2
Lj9A419T35 Lonicera japonica HOM05D003766 ORTHO05D004607 1.1e-185 654.4 657 67.4
Ah.14g085990 Amaranthus hybridus HOM05D003766 ORTHO05D004607 3.2e-185 652.9 683 64.6
TPR.G1449 Trifolium pratense HOM05D003766 ORTHO05D004607 9.3e-185 651.4 672 62.5
Peaxi162Scf00314g00235 Petunia axillaris HOM05D003766 ORTHO05D004607 1.2e-184 651.0 681 67.8
Glyma.08G054900 Glycine max HOM05D003766 ORTHO05D004607 2.1e-184 650.2 662 61.5
Aqoxy3G02431 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 6.0e-184 648.7 679 62.7
Phvul.002G330600 Phaseolus vulgaris HOM05D003766 ORTHO05D004607 6.0e-184 648.7 632 69.1
Medtr8g107400 Medicago truncatula HOM05D003766 ORTHO05D004607 1.0e-183 647.9 667 65.7
arahy.Tifrunner.gnm1.ann1.G74QKM Arachis hypogaea HOM05D003766 ORTHO05D004607 1.5e-182 644.0 710 64.1
AUR62042013 Chenopodium quinoa HOM05D003766 ORTHO05D004607 1.5e-182 644.0 672 65.3
CDE05G3381 Ceratophyllum demersum HOM05D003766 ORTHO05D004607 4.3e-182 642.5 647 67.4
Cfa019652 Carpinus fangiana HOM05D003766 ORTHO05D004607 1.3e-181 641.0 680 61.8
QL10p029803 Quercus lobata HOM05D003766 ORTHO05D004607 1.4e-180 637.5 686 65.9
GSVIVG01008448001 Vitis vinifera HOM05D003766 ORTHO05D004607 2.4e-180 636.7 564 63.8
Haze_18860 Corylus avellana HOM05D003766 ORTHO05D004607 6.9e-180 635.2 680 61.6
Sabra12G0032400 Salix brachista HOM05D003766 ORTHO05D004607 5.8e-179 632.1 696 62.8
VMungo0251G1288 Vigna mungo HOM05D003766 ORTHO05D004607 5.8e-179 632.1 657 63.2
Glyma.05G246700 Glycine max HOM05D003766 ORTHO05D004607 1.9e-177 627.1 660 65.5
ATR0753G133 Amborella trichopoda HOM05D003766 ORTHO05D004607 2.5e-174 616.7 677 63.7
Eucgr.B00877 Eucalyptus grandis HOM05D003766 ORTHO05D004607 1.4e-169 600.9 577 71.6
Atru.chr9.1724 Acer truncatum HOM05D003766 ORTHO05D004607 8.8e-167 591.7 599 67.8
Sp5g28730 Schrenkiella parvula HOM05D003766 ORTHO05D004607 4.2e-161 572.8 667 58.9
CiPaw.16G093700 Carya illinoinensis HOM05D003766 ORTHO05D004607 4.7e-160 569.3 661 56.3
HPP92_011105 Vanilla planifolia HOM05D003766 ORTHO05D004607 7.9e-160 568.5 665 59.1
SEGI_38105 Sequoiadendron giganteum HOM05D003766 ORTHO05D004607 5.1e-159 565.8 688 59.7
Zm00001eb011300 Zea mays HOM05D003766 ORTHO05D004607 9.7e-158 561.6 600 62.5
Nitab4.5_0003401g0020 Nicotiana tabacum HOM05D003766 ORTHO05D004607 1.4e-156 557.8 677 62.5
CiPaw.15G143700 Carya illinoinensis HOM05D003766 ORTHO05D004607 1.5e-153 547.7 526 72.2
Mapoly0093s0082 Marchantia polymorpha HOM05D003766 ORTHO05D004607 1.0e-151 541.6 623 58.9
Pp3c19_13490 Physcomitrium patens HOM05D003766 ORTHO05D004607 5.2e-151 539.3 672 55.7
SMO228G0037 Selaginella moellendorffii HOM05D003766 ORTHO05D004607 3.5e-147 526.6 685 52.3
Nitab4.5_0004556g0010 Nicotiana tabacum HOM05D003766 ORTHO05D004607 1.1e-145 521.5 732 57.1
MD06G1227600 Malus domestica HOM05D003766 ORTHO05D004607 9.8e-142 508.4 527 70.0
Pp3c22_10650 Physcomitrium patens HOM05D003766 ORTHO05D004607 3.2e-137 493.4 620 55.5
Manes.06G005600 Manihot esculenta HOM05D003766 ORTHO05D004607 2.9e-130 470.3 522 68.0
Oeu026275.1 Olea europaea HOM05D003766 ORTHO05D004607 6.6e-130 469.2 503 67.8
Sed0018638 Sechium edule HOM05D003766 ORTHO05D004607 3.4e-126 456.8 542 65.5
Pp3c19_15130 Physcomitrium patens HOM05D003766 ORTHO05D004607 9.8e-126 455.3 511 61.6
HanXRQChr14g0456281 Helianthus annuus HOM05D003766 ORTHO05D004607 7.0e-124 449.1 536 58.2
TAR629G3071 Trochodendron aralioides HOM05D003766 ORTHO05D004607 1.4e-119 434.9 262 80.2
vmacro17777 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 4.0e-111 406.8 262 75.6
vmacro17776 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 3.5e-99 367.1 296 68.2
Carub.0002s2031 Capsella rubella HOM05D003766 ORTHO05D004607 4.3e-97 360.1 456 46.3
TAR629G0485 Trochodendron aralioides HOM05D003766 ORTHO05D004607 6.2e-96 356.3 296 63.5
Aqoxy3G00039 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 2.6e-94 350.9 483 61.3
AagrBONN_evm.TU.Sc2ySwM_228.854 Anthoceros agrestis HOM05D003766 ORTHO05D004607 1.6e-91 341.7 477 54.5
BcaB05g24801 Brassica carinata HOM05D003766 ORTHO05D004607 4.6e-83 313.5 253 62.8
COL.COLO4_04795 Corchorus olitorius HOM05D003766 ORTHO05D004607 1.1e-79 302.4 215 68.8
HPP92_011088 Vanilla planifolia HOM05D003766 ORTHO05D004607 2.3e-74 284.6 304 79.6
Zm00001eb398230 Zea mays HOM05D003766 ORTHO05D004607 1.4e-71 275.4 297 51.5
BcaC04g22654 Brassica carinata HOM05D003766 ORTHO05D004607 6.0e-67 260.0 175 73.1
BcaC07g36877 Brassica carinata HOM05D003766 ORTHO05D004607 1.5e-65 255.4 276 51.4
BolC2t09163H Brassica oleracea HOM05D003766 ORTHO05D004607 9.0e-63 246.1 320 68.8
Atru.chr9.1718 Acer truncatum HOM05D003766 ORTHO05D004607 5.0e-61 240.4 172 68.6
Psat4g000240 Pisum sativum HOM05D003766 ORTHO05D004607 1.3e-58 232.3 287 46.7
C02p31190 Brassica napus HOM05D003766 ORTHO05D004607 3.4e-54 217.6 293 45.1
BolC7t40944H Brassica oleracea HOM05D003766 ORTHO05D004607 3.2e-52 211.1 138 73.9
QL10p029813 Quercus lobata HOM05D003766 ORTHO05D004607 1.4e-50 205.7 291 44.7
Actinidia35129 Actinidia chinensis HOM05D003766 ORTHO05D004607 6.9e-47 193.4 289 73.0
C09p56670 Brassica napus HOM05D003766 ORTHO05D004607 2.2e-45 188.3 111 82.0
C02p31200 Brassica napus HOM05D003766 ORTHO05D004607 1.9e-44 185.3 127 67.7
BolC1t04841H Brassica oleracea HOM05D003766 ORTHO05D004607 3.6e-43 181.0 111 79.3
HPP92_011087 Vanilla planifolia HOM05D003766 ORTHO05D004607 1.8e-42 178.7 228 44.7
Dinv12692 Davidia involucrata HOM05D003766 ORTHO05D004607 2.5e-36 158.3 87 80.5
QL10p030223 Quercus lobata HOM05D003766 ORTHO05D004607 7.2e-36 156.8 168 53.0
Cre03.g197400 Chlamydomonas reinhardtii HOM05D003766 ORTHO05D004607 1.2e-35 156.0 556 33.5
CBR_g40334 Chara braunii HOM05D000019 ORTHO05D000002 5.2e-34 150.6 320 55.3
Sp5g28740 Schrenkiella parvula HOM05D000408 ORTHO05D004607 1.1e-31 142.9 154 51.9
MCO08G236 Micromonas commoda HOM05D003766 ORTHO05D004607 4.1e-31 141.0 179 47.5
COL.COLO4_04913 Corchorus olitorius HOM05D003766 ORTHO05D004607 3.8e-29 134.4 181 47.5
PRCOL_00002904 Prasinoderma coloniale HOM05D003766 ORTHO05D004607 1.0e-26 126.3 215 36.3
Hma1.2p1_2524F.1_g323905 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.8e-26 125.6 98 64.3
Hma1.2p1_0759F.1_g213970 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 3.0e-26 124.8 95 64.2
Hma1.2p1_0127F.1_g059480 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.2e-25 122.9 98 64.3
Hma1.2p1_0502F.1_g167690 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 2.6e-25 121.7 107 58.9
Cfa023117 Carpinus fangiana HOM05D016742 ORTHO05D028589 5.7e-25 120.6 552 31.2
C08p01510 Brassica napus HOM05D003766 ORTHO05D004607 1.3e-16 92.8 69 60.9
Oeu002213.1 Olea europaea HOM05D003766 ORTHO05D004607 5.0e-13 80.9 160 38.1
Hma1.2p1_0478F.1_g161250 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.5e-12 79.3 68 57.4
BraA05t20732Z Brassica rapa HOM05D003766 ORTHO05D004607 7.3e-12 77.0 68 52.9
BolC9t56024H Brassica oleracea HOM05D021712 ORTHO05D021656 1.2e-11 76.3 62 56.5
A05p35970 Brassica napus HOM05D003766 ORTHO05D004607 4.7e-11 74.3 63 55.6
A02p18790 Brassica napus HOM05D003766 ORTHO05D004607 6.8e-10 70.5 48 64.6
C09p31690 Brassica napus HOM05D021712 ORTHO05D021656 6.8e-10 70.5 56 57.1
CBR_g40333 Chara braunii HOM05D003766 ORTHO05D004607 1.2e-09 69.7 120 37.5
Hma1.2p1_0632F.1_g192420 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 2.6e-09 68.6 54 59.3
A02p18780 Brassica napus HOM05D003766 ORTHO05D004607 9.8e-09 66.6 83 48.2
Glyma.15G140700 Glycine max HOM05D003766 ORTHO05D004607 3.2e-07 61.6 72 41.7
A02p21490 Brassica napus HOM05D021712 ORTHO05D021656 2.7e-06 58.5 117 37.6
A05p18420 Brassica napus HOM05D017138 ORTHO05D016749 4.6e-06 57.8 52 51.9
C07p05430 Brassica napus HOM05D003766 ORTHO05D016749 4.6e-06 57.8 49 55.1


User provided reference genes

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