Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_750.g28470 Utricularia gibba HOM05D003838 ORTHO05D004444 2.0e-158 562.4 282 100.0
MSTRG.23130 Avicennia marina HOM05D003838 ORTHO05D004444 2.2e-56 223.4 193 59.6
Migut.I00010 Erythranthe guttata HOM05D003838 ORTHO05D004444 5.4e-55 218.8 190 59.5
SalBow7G4199 Salvia bowleyana HOM05D003838 ORTHO05D004444 5.8e-49 198.7 199 53.8
Actinidia26441 Actinidia chinensis HOM05D003838 ORTHO05D004444 9.9e-49 198.0 195 51.8
SalBow5G3784 Salvia bowleyana HOM05D003838 ORTHO05D004444 1.7e-48 197.2 210 51.9
TAR376G0719 Trochodendron aralioides HOM05D003838 ORTHO05D004444 3.2e-47 193.0 196 48.5
PSO063G7239 Papaver somniferum HOM05D003838 ORTHO05D004444 1.2e-46 191.0 189 52.4
Cfa015168 Carpinus fangiana HOM05D003838 ORTHO05D004444 1.6e-46 190.7 191 48.7
SGA_v2.0_scaffold25G10841 Striga asiatica HOM05D003838 ORTHO05D004444 1.6e-46 190.7 191 52.9
Hma1.2p1_0002F.1_g002170 Hydrangea macrophylla HOM05D003838 ORTHO05D004444 2.1e-46 190.3 194 49.0
SGA_v2.0_scaffold90G27933 Striga asiatica HOM05D003838 ORTHO05D004444 2.7e-46 189.9 191 51.8
Gohir.A10G137200 Gossypium hirsutum HOM05D003838 ORTHO05D004444 3.5e-46 189.5 196 49.0
PSO782G5029 Papaver somniferum HOM05D003838 ORTHO05D004444 4.6e-46 189.1 189 51.9
CSS0031035 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 6.0e-46 188.7 193 49.7
CANSAT78G1384 Cannabis sativa HOM05D003838 ORTHO05D004444 6.0e-46 188.7 196 49.5
Nn1g08615 Nelumbo nucifera HOM05D003838 ORTHO05D004444 7.8e-46 188.3 189 50.3
CSS0022226 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 1.7e-45 187.2 193 49.7
PSO210G5426 Papaver somniferum HOM05D003838 ORTHO05D004444 1.7e-45 187.2 189 50.8
Lj9P420T34 Lonicera japonica HOM05D003838 ORTHO05D004444 2.3e-45 186.8 195 49.7
MBI16_g18329_MAGBIO Magnolia biondii HOM05D003838 ORTHO05D004444 2.3e-45 186.8 191 49.2
GSVIVG01022417001 Vitis vinifera HOM05D003838 ORTHO05D004444 3.0e-45 186.4 193 49.2
Potri.017G030000 Populus trichocarpa HOM05D003838 ORTHO05D004444 3.9e-45 186.0 199 47.7
CSS0030021 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 5.1e-45 185.7 193 49.2
Haze_01511 Corylus avellana HOM05D003838 ORTHO05D004444 5.1e-45 185.7 179 50.8
THA.LOC104826203 Tarenaya hassleriana HOM05D003838 ORTHO05D004444 5.1e-45 185.7 195 48.2
Gorai.011G142700 Gossypium raimondii HOM05D003838 ORTHO05D004444 8.6e-45 184.9 196 48.5
MD13G1208600 Malus domestica HOM05D003838 ORTHO05D004444 8.6e-45 184.9 193 47.7
Manes.03G131800 Manihot esculenta HOM05D003838 ORTHO05D004444 8.6e-45 184.9 195 51.3
Sabra17G0019500 Salix brachista HOM05D003838 ORTHO05D004444 8.6e-45 184.9 199 47.7
Sed0023259 Sechium edule HOM05D003838 ORTHO05D004444 1.1e-44 184.5 192 50.0
arahy.Tifrunner.gnm1.ann1.0B6HPH Arachis hypogaea HOM05D003838 ORTHO05D004444 1.5e-44 184.1 188 48.4
CDE06G0074 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 1.5e-44 184.1 195 50.8
arahy.Tifrunner.gnm1.ann1.536K79 Arachis hypogaea HOM05D003838 ORTHO05D004444 1.9e-44 183.7 188 48.4
TAR629G1244 Trochodendron aralioides HOM05D003838 ORTHO05D004444 2.5e-44 183.3 187 50.3
Ca_14316_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 5.6e-44 182.2 176 49.4
CsaV3_6G002030 Cucumis sativus L. HOM05D003838 ORTHO05D004444 5.6e-44 182.2 194 49.5
Peaxi162Scf00201g00019 Petunia axillaris HOM05D003838 ORTHO05D004444 7.3e-44 181.8 192 47.4
Prupe.3G140200 Prunus persica HOM05D003838 ORTHO05D004444 7.3e-44 181.8 190 47.9
DCAR_006535 Daucus carota HOM05D003838 ORTHO05D004444 9.6e-44 181.4 190 47.9
Medtr3g021420 Medicago truncatula HOM05D003838 ORTHO05D004444 9.6e-44 181.4 188 46.3
vmacro23050 Vaccinium macrocarpon HOM05D003838 ORTHO05D004444 9.6e-44 181.4 193 46.1
Thecc.04G179800 Theobroma cacao HOM05D003838 ORTHO05D004444 1.2e-43 181.0 197 47.7
Psat5g216120 Pisum sativum HOM05D003838 ORTHO05D004444 1.6e-43 180.6 188 47.9
Duzib212G0889 Durio zibethinus HOM05D003838 ORTHO05D004444 2.8e-43 179.9 192 47.9
Rhsim05G0049100 Rhododendron simsii HOM05D003838 ORTHO05D004444 2.8e-43 179.9 192 46.9
AUR62008103 Chenopodium quinoa HOM05D003838 ORTHO05D004444 3.6e-43 179.5 190 48.4
Medtr3g030930 Medicago truncatula HOM05D003838 ORTHO05D004444 3.6e-43 179.5 188 46.3
Medtr7g090650 Medicago truncatula HOM05D003838 ORTHO05D004444 3.6e-43 179.5 176 48.9
Prupe.1G032600 Prunus persica HOM05D003838 ORTHO05D004444 4.7e-43 179.1 193 47.2
Aa31LG1G8370 Aethionema arabicum HOM05D003838 ORTHO05D004444 6.2e-43 178.7 192 47.4
AUR62028681 Chenopodium quinoa HOM05D003838 ORTHO05D004444 8.1e-43 178.3 190 48.4
Rhsim09G0030300 Rhododendron simsii HOM05D003838 ORTHO05D004444 1.8e-42 177.2 194 46.4
PGSC0003DMG400029841 Solanum tuberosum HOM05D003838 ORTHO05D004444 1.8e-42 177.2 193 48.7
vmacro01004 Vaccinium macrocarpon HOM05D003838 ORTHO05D004444 1.8e-42 177.2 185 47.0
ClCG08G004710 Citrullus lanatus HOM05D003838 ORTHO05D004444 3.1e-42 176.4 194 48.5
Ciclev10022331m.g Citrus clementina HOM05D003838 ORTHO05D004444 3.1e-42 176.4 177 50.3
Atru.chr3.1491 Acer truncatum HOM05D003838 ORTHO05D004444 4.0e-42 176.0 186 48.9
Lalb_Chr10g0091981 Lupinus albus HOM05D003838 ORTHO05D004444 5.2e-42 175.6 189 47.6
CSS0020761 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 8.9e-42 174.9 194 46.9
Manes.15G070000 Manihot esculenta HOM05D003838 ORTHO05D004444 8.9e-42 174.9 195 48.2
CARHR005500 Cardamine hirsuta HOM05D003838 ORTHO05D004444 1.5e-41 174.1 195 45.1
Cc06_g03220 Coffea canephora HOM05D003838 ORTHO05D004444 2.6e-41 173.3 196 48.0
Sopen10g030220 Solanum pennellii HOM05D003838 ORTHO05D004444 2.6e-41 173.3 193 47.2
RcHm_v2.0_Chr4g0390901 Rosa chinensis HOM05D003838 ORTHO05D004444 3.4e-41 172.9 190 45.8
Solyc10g079580.2 Solanum lycopersicum HOM05D003838 ORTHO05D004444 3.4e-41 172.9 193 47.2
Migut.L01638 Erythranthe guttata HOM05D003838 ORTHO05D004444 4.4e-41 172.6 193 47.7
RcHm_v2.0_Chr4g0390961 Rosa chinensis HOM05D003838 ORTHO05D004444 5.8e-41 172.2 190 45.8
arahy.Tifrunner.gnm1.ann1.JCJT2N Arachis hypogaea HOM05D000735 ORTHO05D004669 7.6e-41 171.8 204 45.6
Lalb_Chr17g0336351 Lupinus albus HOM05D003838 ORTHO05D004444 7.6e-41 171.8 176 48.3
Thhalv10008811m.g Eutrema salsugineum HOM05D003838 ORTHO05D004444 9.9e-41 171.4 195 44.6
MBI16_g18328_MAGBIO Magnolia biondii HOM05D003838 ORTHO05D004444 1.3e-40 171.0 193 45.1
CDE02G1933 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 1.7e-40 170.6 189 46.0
RhsimUnG0118200 Rhododendron simsii HOM05D003838 ORTHO05D004444 2.2e-40 170.2 192 44.3
Nitab4.5_0000515g0040 Nicotiana tabacum HOM05D003838 ORTHO05D004444 3.8e-40 169.5 177 49.2
QL03p038958 Quercus lobata HOM05D003838 ORTHO05D004444 3.8e-40 169.5 190 43.7
Cc07_g02090 Coffea canephora HOM05D003838 ORTHO05D004444 4.9e-40 169.1 196 46.4
Eucgr.A00080 Eucalyptus grandis HOM05D003838 ORTHO05D004444 4.9e-40 169.1 193 46.6
Glyma.11G081600 Glycine max HOM05D003838 ORTHO05D004444 4.9e-40 169.1 188 44.1
PGR083G1767 Punica granatum HOM05D003838 ORTHO05D004444 4.9e-40 169.1 191 46.6
ECA246G3227 Erigeron canadensis HOM05D003838 ORTHO05D004444 6.4e-40 168.7 187 47.1
HanXRQChr10g0305171 Helianthus annuus HOM05D003838 ORTHO05D004444 8.4e-40 168.3 192 45.8
HanXRQChr16g0504861 Helianthus annuus HOM05D003838 ORTHO05D004444 8.4e-40 168.3 192 46.4
Lsat_1_v5_gn_2_85780 Lactuca sativa HOM05D003838 ORTHO05D004444 8.4e-40 168.3 181 47.5
Hund02940 Selenicereus undatus HOM05D003838 ORTHO05D004444 8.4e-40 168.3 196 44.9
TPR.G3853 Trifolium pratense HOM05D003838 ORTHO05D004444 8.4e-40 168.3 188 46.8
Sp1g04800 Schrenkiella parvula HOM05D003838 ORTHO05D004444 1.1e-39 167.9 191 44.5
FvH4_4g03700 Fragaria vesca HOM05D003838 ORTHO05D004444 1.4e-39 167.5 187 44.9
Lj3g0022900 Lotus japonicus HOM05D003838 ORTHO05D004444 1.4e-39 167.5 179 46.9
Aqoxy7G02681 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 1.9e-39 167.2 177 49.7
Carub.0001s0533 Capsella rubella HOM05D003838 ORTHO05D004444 1.9e-39 167.2 195 45.6
Phvul.005G032200 Phaseolus vulgaris HOM05D003838 ORTHO05D004444 1.9e-39 167.2 176 46.0
QL10p048766 Quercus lobata HOM05D003838 ORTHO05D004444 1.9e-39 167.2 179 45.8
RcHm_v2.0_Chr4g0393311 Rosa chinensis HOM05D003838 ORTHO05D004444 1.9e-39 167.2 192 44.3
Ah.11g050950 Amaranthus hybridus HOM05D003838 ORTHO05D004444 2.4e-39 166.8 189 46.6
BolC5t29205H Brassica oleracea HOM05D003838 ORTHO05D004444 2.4e-39 166.8 191 44.0
FAN12G0299 Fragaria x ananassa HOM05D000189 ORTHO05D000474 3.2e-39 166.4 183 45.4
HanXRQChr02g0057691 Helianthus annuus HOM05D003838 ORTHO05D004444 3.2e-39 166.4 193 45.6
HanXRQChr14g0439271 Helianthus annuus HOM05D003838 ORTHO05D004444 3.2e-39 166.4 193 46.1
VMungo1080G0233 Vigna mungo HOM05D003838 ORTHO05D004444 3.2e-39 166.4 188 44.7
C05p04300 Brassica napus HOM05D003838 ORTHO05D004444 4.2e-39 166.0 191 43.5
FAN17G3077 Fragaria x ananassa HOM05D003838 ORTHO05D004444 4.2e-39 166.0 187 45.5
BraA10t42729Z Brassica rapa HOM05D003838 ORTHO05D004444 5.4e-39 165.6 191 44.0
HanXRQChr16g0516761 Helianthus annuus HOM05D003838 ORTHO05D004444 5.4e-39 165.6 192 45.3
A10p04640 Brassica napus HOM05D003838 ORTHO05D004444 7.1e-39 165.2 191 44.0
SEGI_03408 Sequoiadendron giganteum HOM05D003838 ORTHO05D004444 9.3e-39 164.9 178 46.6
EL10Ac5g10613 Beta vulgaris HOM05D003838 ORTHO05D004444 1.2e-38 164.5 190 45.8
AUR62024648 Chenopodium quinoa HOM05D004658 ORTHO05D005927 3.5e-38 162.9 205 43.9
MELO3C008320.2 Cucumis melo HOM05D003838 ORTHO05D004444 3.5e-38 162.9 242 39.7
HanXRQChr01g0021151 Helianthus annuus HOM05D003838 ORTHO05D004444 3.5e-38 162.9 192 44.8
ECA238G0498 Erigeron canadensis HOM05D003838 ORTHO05D004444 4.6e-38 162.5 172 50.6
COL.COLO4_07664 Corchorus olitorius HOM05D003838 ORTHO05D004444 6.0e-38 162.2 195 43.1
TWI38G0658 Tripterygium wilfordii HOM05D003838 ORTHO05D004444 1.0e-37 161.4 189 45.5
Peaxi162Scf00970g00146 Petunia axillaris HOM05D003838 ORTHO05D004444 1.3e-37 161.0 193 45.6
HanXRQChr16g0517051 Helianthus annuus HOM05D003838 ORTHO05D004444 1.7e-37 160.6 193 45.1
AL1G15920 Arabidopsis lyrata HOM05D003838 ORTHO05D004444 3.0e-37 159.8 194 43.3
AT1G05970 Arabidopsis thaliana HOM05D003838 ORTHO05D004444 3.0e-37 159.8 194 43.3
CARHR038440 Cardamine hirsuta HOM05D003838 ORTHO05D004444 3.0e-37 159.8 170 47.6
HanXRQChr12g0355781 Helianthus annuus HOM05D003838 ORTHO05D004444 3.0e-37 159.8 192 45.3
Lj5P157T23 Lonicera japonica HOM05D003838 ORTHO05D004444 3.0e-37 159.8 146 52.1
SEGI_13821 Sequoiadendron giganteum HOM05D003838 ORTHO05D004444 3.0e-37 159.8 195 42.6
ATR0665G504 Amborella trichopoda HOM05D003838 ORTHO05D004444 3.9e-37 159.5 193 44.0
Nitab4.5_0002208g0080 Nicotiana tabacum HOM05D003838 ORTHO05D004444 5.1e-37 159.1 189 45.0
HanXRQChr02g0057701 Helianthus annuus HOM05D003838 ORTHO05D004444 6.6e-37 158.7 192 45.8
Oeu016385.1 Olea europaea HOM05D003838 ORTHO05D004444 6.6e-37 158.7 174 48.3
AUR62011801 Chenopodium quinoa HOM05D003838 ORTHO05D004444 1.1e-36 157.9 198 44.4
Hund09632 Selenicereus undatus HOM05D003838 ORTHO05D004444 4.3e-36 156.0 199 44.2
Nn5g28129 Nelumbo nucifera HOM05D003838 ORTHO05D004444 1.3e-35 154.5 183 42.6
Aqoxy7G02974 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 1.6e-35 154.1 190 43.2
Nitab4.5_0002162g0060 Nicotiana tabacum HOM05D003838 ORTHO05D004444 1.6e-35 154.1 173 46.8
Sc20g0000750 Simmondsia chinensis HOM05D003838 ORTHO05D004444 1.6e-35 154.1 199 40.7
PGSC0003DMG400002948 Solanum tuberosum HOM05D003838 ORTHO05D004444 1.6e-35 154.1 190 42.6
Nitab4.5_0024579g0010 Nicotiana tabacum HOM05D003838 ORTHO05D004444 3.6e-35 152.9 194 42.8
RcHm_v2.0_Chr4g0390871 Rosa chinensis HOM05D003838 ORTHO05D004444 6.2e-35 152.1 181 42.5
arahy.Tifrunner.gnm1.ann1.IZ4F9K Arachis hypogaea HOM05D003838 ORTHO05D004444 3.1e-34 149.8 202 41.6
Gohir.D10G129400 Gossypium hirsutum HOM05D003838 ORTHO05D004444 5.3e-34 149.1 145 50.3
Aqoxy285s002 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 4.4e-33 146.0 175 44.6
BcaC05g24315 Brassica carinata HOM05D003838 ORTHO05D004444 2.2e-32 143.7 191 40.8
Ca_24199_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 6.4e-32 142.1 138 49.3
Sopen04g016270 Solanum pennellii HOM05D003838 ORTHO05D004444 8.4e-32 141.7 165 44.8
Ca_25969_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 1.1e-31 141.4 146 47.9
FAN12G3313 Fragaria x ananassa HOM05D003838 ORTHO05D004444 4.2e-31 139.4 193 39.4
FvH4_4g02890 Fragaria vesca HOM05D003838 ORTHO05D004444 7.1e-31 138.7 193 39.4
Ca_24671_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 3.5e-30 136.3 142 45.8
Sp1g04950 Schrenkiella parvula HOM05D003838 ORTHO05D004444 3.9e-29 132.9 193 37.8
EL10As5g23534 Beta vulgaris HOM05D003838 ORTHO05D004444 1.1e-28 131.3 196 39.3
CDE08G0678 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 1.1e-28 131.3 128 52.3
Os07g0256200 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 1.5e-28 131.0 189 37.6
vmacro04174 Vaccinium macrocarpon HOM05D003838 ORTHO05D004444 1.5e-28 131.0 161 44.1
Os09g0111800 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 3.3e-28 129.8 190 38.9
Zm00001eb304590 Zea mays HOM05D003838 ORTHO05D004444 7.4e-28 128.6 172 40.1
Os04g0689700 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 2.8e-27 126.7 190 38.4
CiPaw.01G100400 Carya illinoinensis HOM05D003838 ORTHO05D004444 2.4e-26 123.6 139 43.2
ATR0665G008 Amborella trichopoda HOM05D003838 ORTHO05D004444 3.1e-26 123.2 145 43.4
Zm00001eb076930 Zea mays HOM05D003838 ORTHO05D004444 2.6e-25 120.2 189 34.9
Zm00001eb076310 Zea mays HOM05D003838 ORTHO05D004444 4.5e-25 119.4 189 34.9
PSO832G2359 Papaver somniferum HOM05D003838 ORTHO05D004444 5.8e-25 119.0 189 37.0
Cpa.g.sc71.4 Carica papaya HOM05D003838 ORTHO05D004444 3.8e-24 116.3 126 47.6
HPP92_001929 Vanilla planifolia HOM05D003838 ORTHO05D004444 6.4e-24 115.5 192 35.4
Os02g0669700 Oryza sativa ssp. japonica HOM05D003838 ORTHO05D004444 8.4e-24 115.2 187 39.6
Rhsim12G0057800 Rhododendron simsii HOM05D003838 ORTHO05D004444 7.1e-23 112.1 150 40.0
FAN22G1473 Fragaria x ananassa HOM05D003838 ORTHO05D004444 6.7e-21 105.5 126 43.7
RcHm_v2.0_Chr4g0390851 Rosa chinensis HOM05D003838 ORTHO05D004444 2.5e-15 87.0 107 42.1
CDE08G1258 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 4.2e-15 86.3 96 47.9
MD16G1210800 Malus domestica HOM05D003838 ORTHO05D004444 7.1e-15 85.5 108 44.4
Rhsim12G0009000 Rhododendron simsii HOM05D003838 ORTHO05D004444 4.8e-11 72.8 64 56.2
Mapoly0037s0121 Marchantia polymorpha HOM05D003838 ORTHO05D004444 9.0e-10 68.6 182 26.4
Peaxi162Scf01029g00016 Petunia axillaris HOM05D003838 ORTHO05D004444 2.0e-09 67.4 63 50.8
CBR_g15988 Chara braunii HOM05D003838 ORTHO05D004444 2.6e-09 67.0 222 25.7
Sopen04g016210 Solanum pennellii HOM05D003838 ORTHO05D004444 5.9e-09 65.9 80 43.8
CBR_g31525 Chara braunii HOM05D003838 ORTHO05D004444 1.4e-07 61.2 223 25.6
Actinidia06873 Actinidia chinensis HOM05D003838 ORTHO05D004444 1.9e-07 60.8 190 29.5


User provided reference genes

Program Settings