Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_749.g13802 Utricularia gibba HOM05D004841 ORTHO05D005874 2.7e-103 378.6 189 100.0
SGA_v2.0_scaffold146G36131 Striga asiatica HOM05D004841 ORTHO05D005874 5.4e-67 258.1 157 80.9
MSTRG.7507 Avicennia marina HOM05D004841 ORTHO05D005874 1.2e-66 256.9 180 72.8
Migut.M00886 Erythranthe guttata HOM05D004841 ORTHO05D005874 3.6e-63 245.4 157 74.5
SalBow8G2637 Salvia bowleyana HOM05D004841 ORTHO05D005874 1.2e-61 240.4 157 75.8
Oeu013128.1 Olea europaea HOM05D004841 ORTHO05D005874 3.7e-60 235.3 157 73.9
Solyc02g078830.4 Solanum lycopersicum HOM05D004841 ORTHO05D005874 1.0e-57 227.3 178 65.2
PGSC0003DMG400022420 Solanum tuberosum HOM05D004841 ORTHO05D005874 1.3e-57 226.9 178 64.6
Sopen02g023650 Solanum pennellii HOM05D004841 ORTHO05D005874 2.3e-57 226.1 178 64.6
Nitab4.5_0004020g0010 Nicotiana tabacum HOM05D004841 ORTHO05D005874 5.1e-57 224.9 157 70.7
Nitab4.5_0000501g0020 Nicotiana tabacum HOM05D004841 ORTHO05D005874 8.6e-57 224.2 157 70.1
Peaxi162Scf00465g00119 Petunia axillaris HOM05D004841 ORTHO05D005874 8.6e-57 224.2 178 64.6
Dinv32222 Davidia involucrata HOM05D004841 ORTHO05D005874 1.6e-55 219.9 158 70.3
Lsat_1_v5_gn_4_29561 Lactuca sativa HOM05D004841 ORTHO05D005874 2.8e-55 219.2 176 63.1
Rhsim13G0116700 Rhododendron simsii HOM05D004841 ORTHO05D005874 4.7e-55 218.4 162 70.4
Actinidia01573 Actinidia chinensis HOM05D004841 ORTHO05D005874 1.1e-54 217.2 159 70.4
CSS0019612 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 1.8e-54 216.5 159 69.8
CSS0027900 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 1.8e-54 216.5 159 69.8
Cc02_g29720 Coffea canephora HOM05D004841 ORTHO05D005874 3.1e-54 215.7 159 66.7
Hma1.2p1_0594F.1_g185890 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 3.1e-54 215.7 158 68.4
GSVIVG01034157001 Vitis vinifera HOM05D004841 ORTHO05D005874 3.1e-54 215.7 158 70.3
HanXRQChr17g0564621 Helianthus annuus HOM05D004841 ORTHO05D005874 4.0e-54 215.3 159 68.6
Sed0021741 Sechium edule HOM05D004841 ORTHO05D005874 7.5e-53 211.1 158 67.7
ClCG01G024810 Citrullus lanatus HOM05D004841 ORTHO05D005874 2.2e-52 209.5 158 65.8
Manes.17G073300 Manihot esculenta HOM05D004841 ORTHO05D005874 2.2e-52 209.5 161 66.5
Lj2A321T65 Lonicera japonica HOM05D004841 ORTHO05D005874 1.1e-51 207.2 160 65.6
MD05G1280700 Malus domestica HOM05D004841 ORTHO05D005874 4.1e-51 205.3 161 64.6
vmacro03353 Vaccinium macrocarpon HOM05D004841 ORTHO05D005874 5.4e-51 204.9 159 67.9
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 9.2e-51 204.1 161 65.2
Atru.chr10.1099 Acer truncatum HOM05D004841 ORTHO05D005874 1.2e-50 203.8 164 64.6
Nn3g20436 Nelumbo nucifera HOM05D004841 ORTHO05D005874 1.2e-50 203.8 158 67.7
Potri.012G107400 Populus trichocarpa HOM05D004841 ORTHO05D005874 1.2e-50 203.8 161 64.6
Ah.08g211520 Amaranthus hybridus HOM05D004841 ORTHO05D005874 1.6e-50 203.4 157 62.4
Psat1g020080 Pisum sativum HOM05D004841 ORTHO05D005874 1.6e-50 203.4 158 65.2
EL10Ac7g16662 Beta vulgaris HOM05D004841 ORTHO05D005874 2.7e-50 202.6 161 61.5
CsaV3_6G051930 Cucumis sativus L. HOM05D004841 ORTHO05D005874 2.7e-50 202.6 158 63.9
MELO3C007114.2 Cucumis melo HOM05D004841 ORTHO05D005874 3.5e-50 202.2 158 63.9
Prupe.4G084200 Prunus persica HOM05D004841 ORTHO05D005874 3.5e-50 202.2 161 64.6
TPR.G29935 Trifolium pratense HOM05D004841 ORTHO05D005874 3.5e-50 202.2 158 63.9
QL05p055481 Quercus lobata HOM05D004841 ORTHO05D005874 4.6e-50 201.8 158 62.7
CANSAT11G1247 Cannabis sativa HOM05D004841 ORTHO05D005874 6.0e-50 201.4 161 60.9
ECA234G4271 Erigeron canadensis HOM05D004841 ORTHO05D005874 1.0e-49 200.7 159 63.5
MD10G1259100 Malus domestica HOM05D004841 ORTHO05D005874 1.0e-49 200.7 161 62.7
Hund20587 Selenicereus undatus HOM05D004841 ORTHO05D005874 1.0e-49 200.7 165 61.2
Ca_03447_v3 Cicer arietinum L. HOM05D004841 ORTHO05D005874 1.3e-49 200.3 158 63.9
THA.LOC104821761 Tarenaya hassleriana HOM05D004841 ORTHO05D005874 1.3e-49 200.3 163 65.0
CiPaw.10G089600 Carya illinoinensis HOM05D004841 ORTHO05D005874 1.7e-49 199.9 158 66.5
Medtr2g049300 Medicago truncatula HOM05D004841 ORTHO05D005874 1.7e-49 199.9 158 64.6
RcHm_v2.0_Chr5g0014571 Rosa chinensis HOM05D004841 ORTHO05D005874 1.7e-49 199.9 161 62.7
arahy.Tifrunner.gnm1.ann1.0DR3QG Arachis hypogaea HOM05D004841 ORTHO05D005874 5.1e-49 198.4 159 63.5
arahy.Tifrunner.gnm1.ann1.9IA9LY Arachis hypogaea HOM05D004841 ORTHO05D005874 5.1e-49 198.4 159 63.5
Lalb_Chr11g0073321 Lupinus albus HOM05D004841 ORTHO05D005874 5.1e-49 198.4 159 64.8
arahy.Tifrunner.gnm1.ann1.4L8DWS Arachis hypogaea HOM05D004841 ORTHO05D005874 6.6e-49 198.0 159 63.5
BcaB03g15189 Brassica carinata HOM05D004841 ORTHO05D005874 6.6e-49 198.0 185 57.3
BolC2t08451H Brassica oleracea HOM05D004841 ORTHO05D005874 6.6e-49 198.0 163 63.2
Cfa000914 Carpinus fangiana HOM05D004841 ORTHO05D005874 6.6e-49 198.0 158 64.6
A02p14280 Brassica napus HOM05D004841 ORTHO05D005874 8.6e-49 197.6 163 63.2
C02p23090 Brassica napus HOM05D004841 ORTHO05D005874 8.6e-49 197.6 163 63.2
BraA02t06489Z Brassica rapa HOM05D004841 ORTHO05D005874 8.6e-49 197.6 163 63.2
Haze_05641 Corylus avellana HOM05D004841 ORTHO05D005874 8.6e-49 197.6 158 63.9
Eucgr.E02427 Eucalyptus grandis HOM05D004841 ORTHO05D005874 8.6e-49 197.6 162 63.0
BcaNung05075 Brassica carinata HOM05D004841 ORTHO05D005874 1.5e-48 196.8 163 62.6
A07p34060 Brassica napus HOM05D004841 ORTHO05D005874 1.5e-48 196.8 163 62.6
C06p42730 Brassica napus HOM05D004841 ORTHO05D005874 1.5e-48 196.8 163 62.6
C06p42780 Brassica napus HOM05D004841 ORTHO05D005874 1.5e-48 196.8 163 62.6
BolC6t39162H Brassica oleracea HOM05D004841 ORTHO05D005874 1.5e-48 196.8 163 62.6
BraA07t31032Z Brassica rapa HOM05D004841 ORTHO05D005874 1.5e-48 196.8 163 62.6
BcaB05g24290 Brassica carinata HOM05D004841 ORTHO05D005874 1.9e-48 196.4 163 62.6
Sp5g22530 Schrenkiella parvula HOM05D004841 ORTHO05D005874 1.9e-48 196.4 163 62.6
TAR628G1076 Trochodendron aralioides HOM05D004841 ORTHO05D005874 2.5e-48 196.1 158 64.6
PGR031G1170 Punica granatum HOM05D004841 ORTHO05D005874 3.3e-48 195.7 164 61.6
Ciclev10015824m.g Citrus clementina HOM05D004841 ORTHO05D005874 4.3e-48 195.3 163 62.6
Sc02g0001540 Simmondsia chinensis HOM05D004841 ORTHO05D005874 7.3e-48 194.5 163 59.5
arahy.Tifrunner.gnm1.ann1.V1DCF9 Arachis hypogaea HOM05D004841 ORTHO05D005874 9.5e-48 194.1 159 62.9
CiPaw.09G120900 Carya illinoinensis HOM05D004841 ORTHO05D005874 1.6e-47 193.4 158 63.9
Thhalv10018816m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 2.8e-47 192.6 163 61.3
Aa31LG2G2230 Aethionema arabicum HOM05D004841 ORTHO05D005874 3.6e-47 192.2 163 60.7
FvH4_3g05180 Fragaria vesca HOM05D004841 ORTHO05D005874 3.6e-47 192.2 161 60.2
FAN11G3214 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.6e-47 192.2 161 60.2
FAN16G1445 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.6e-47 192.2 161 60.2
FAN21G1690 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.6e-47 192.2 161 60.2
FAN25G3271 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.6e-47 192.2 161 60.2
AL2G19660 Arabidopsis lyrata HOM05D004841 ORTHO05D005874 6.2e-47 191.4 163 62.0
AT1G65030 Arabidopsis thaliana HOM05D004841 ORTHO05D005874 6.2e-47 191.4 163 62.0
DCAR_027897 Daucus carota HOM05D004841 ORTHO05D005874 6.2e-47 191.4 159 65.4
Duzib235G0160 Durio zibethinus HOM05D004841 ORTHO05D005874 6.2e-47 191.4 161 60.9
Glyma.15G195000 Glycine max HOM05D004841 ORTHO05D005874 6.2e-47 191.4 159 61.0
PSO541G1633 Papaver somniferum HOM05D004841 ORTHO05D005874 6.2e-47 191.4 158 61.4
PSO675G7289 Papaver somniferum HOM05D004841 ORTHO05D005874 6.2e-47 191.4 158 61.4
FAN16G2733 Fragaria x ananassa HOM05D004841 ORTHO05D005874 8.1e-47 191.0 161 59.6
CARHR056500 Cardamine hirsuta HOM05D004841 ORTHO05D005874 1.1e-46 190.7 185 56.2
Glyma.09G086200 Glycine max HOM05D004841 ORTHO05D005874 3.1e-46 189.1 159 60.4
Phvul.009G215400 Phaseolus vulgaris HOM05D004841 ORTHO05D005874 3.1e-46 189.1 159 61.0
VMungo1309G2918 Vigna mungo HOM05D004841 ORTHO05D005874 3.1e-46 189.1 159 61.6
COL.COLO4_31030 Corchorus olitorius HOM05D004841 ORTHO05D005874 4.0e-46 188.7 161 59.6
Thecc.06G146500 Theobroma cacao HOM05D004841 ORTHO05D005874 4.0e-46 188.7 161 61.5
TWI63G0939 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 4.0e-46 188.7 161 60.2
Aqoxy5G03944 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 5.2e-46 188.3 157 62.4
Gohir.D10G043800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 5.2e-46 188.3 161 59.6
TWI34G1122 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 8.9e-46 187.6 161 59.6
Aqoxy7G03441 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 1.2e-45 187.2 157 62.4
PSO017G5522 Papaver somniferum HOM05D004841 ORTHO05D005874 1.2e-45 187.2 158 58.2
Gorai.011G046600 Gossypium raimondii HOM05D004841 ORTHO05D005874 1.5e-45 186.8 161 59.0
Gohir.A10G042800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 2.0e-45 186.4 161 59.0
MBI02_g29870_MAGBIO Magnolia biondii HOM05D004841 ORTHO05D005874 2.0e-45 186.4 163 61.3
Carub.0002s1024 Capsella rubella HOM05D004841 ORTHO05D005874 1.3e-44 183.7 163 58.9
Lj6g0003285 Lotus japonicus HOM05D004841 ORTHO05D005874 1.7e-44 183.3 158 59.5
HPP92_012189 Vanilla planifolia HOM05D004841 ORTHO05D005874 9.2e-43 177.6 161 57.1
Dinv21532 Davidia involucrata HOM05D004841 ORTHO05D005874 5.6e-40 168.3 158 59.5
SHI02861 Sapria himalayana HOM05D004841 ORTHO05D005874 1.5e-37 160.2 131 61.1
CDE07G1158 Ceratophyllum demersum HOM05D004841 ORTHO05D005874 2.1e-34 149.8 158 52.5
SEGI_08519 Sequoiadendron giganteum HOM05D004841 ORTHO05D005874 5.6e-32 141.7 180 43.3
ATR0772G214 Amborella trichopoda HOM05D004841 ORTHO05D005874 2.1e-31 139.8 163 43.6
AUR62026924 Chenopodium quinoa HOM05D004841 ORTHO05D005874 2.8e-31 139.4 97 67.0
Mapoly0001s0498 Marchantia polymorpha HOM05D004841 ORTHO05D005874 6.2e-31 138.3 175 41.7
Zm00001eb328580 Zea mays HOM05D004841 ORTHO05D005874 2.6e-29 132.9 170 46.5
Oeu030952.1 Olea europaea HOM05D004841 ORTHO05D005874 6.4e-28 128.3 157 50.3
Sabra13G0018400 Salix brachista HOM05D004841 ORTHO05D004358 1.4e-27 127.1 87 72.4
Cre03.g205800 Chlamydomonas reinhardtii HOM05D004841 ORTHO05D005874 2.3e-25 119.8 178 38.2
ATR1098G095 Amborella trichopoda HOM05D004841 ORTHO05D005874 3.0e-25 119.4 150 42.0
VMungo0251G1518 Vigna mungo HOM05D005230 ORTHO05D051605 3.4e-21 105.9 135 43.7
SMO358G0291 Selaginella moellendorffii HOM05D004841 ORTHO05D005874 8.4e-20 101.3 174 36.2
Oeu030951.1 Olea europaea HOM05D004841 ORTHO05D005874 3.2e-19 99.4 127 50.4
VMungo0720G0475 Vigna mungo HOM05D005230 ORTHO05D051605 4.2e-19 99.0 117 47.9
MCO15G572 Micromonas commoda HOM05D004841 ORTHO05D005874 2.3e-17 93.2 164 33.5
VMungo1382G0002 Vigna mungo HOM05D004841 ORTHO05D005874 3.7e-15 85.9 100 48.0
CBR_g4467 Chara braunii HOM05D004841 ORTHO05D005874 4.5e-13 79.0 99 41.4
VMungo0331G1481 Vigna mungo HOM05D004841 ORTHO05D005874 7.6e-13 78.2 81 46.9
VMungo0712G0001 Vigna mungo HOM05D004841 ORTHO05D005874 5.1e-09 65.5 135 35.6
BcaC03g14843 Brassica carinata HOM05D004841 ORTHO05D005874 2.5e-08 63.2 56 55.4
Cpa.g.c47956 Carica papaya HOM05D004841 ORTHO05D005874 5.7e-08 62.0 39 64.1
Os12g0615900 Oryza sativa ssp. japonica HOM05D004841 ORTHO05D005874 5.7e-08 62.0 94 37.2


User provided reference genes

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