Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 4.6e-147 524.6 281 100.0
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 1.8e-66 256.9 285 56.5
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 9.8e-57 224.6 300 50.0
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 4.1e-55 219.2 310 46.1
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 5.4e-55 218.8 300 48.7
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 4.6e-54 215.7 247 53.8
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 6.0e-54 215.3 290 46.9
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 1.0e-53 214.5 290 45.2
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 1.0e-53 214.5 288 47.9
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 2.3e-53 213.4 297 48.1
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 3.0e-53 213.0 290 46.6
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 7.3e-52 208.4 202 57.4
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 1.6e-51 207.2 289 43.6
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 4.7e-51 205.7 289 47.4
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 1.8e-50 203.8 250 48.0
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 1.2e-49 201.1 244 49.2
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 3.4e-49 199.5 203 52.2
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 4.4e-49 199.1 290 45.5
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 7.5e-49 198.4 207 55.1
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 2.2e-48 196.8 246 49.2
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 2.9e-48 196.4 204 53.9
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 2.9e-48 196.4 251 48.6
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 2.9e-48 196.4 292 43.2
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 2.9e-48 196.4 203 51.2
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 3.7e-48 196.1 266 45.9
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 8.3e-48 194.9 201 53.2
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 8.3e-48 194.9 197 54.3
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 1.4e-47 194.1 204 51.5
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 2.4e-47 193.4 199 54.3
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 2.4e-47 193.4 245 46.5
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 3.2e-47 193.0 212 51.9
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 4.1e-47 192.6 206 54.9
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 5.4e-47 192.2 206 51.9
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 1.6e-46 190.7 205 52.2
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 2.7e-46 189.9 205 52.7
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 3.5e-46 189.5 205 51.7
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 4.6e-46 189.1 202 54.0
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 7.8e-46 188.3 204 52.0
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 1.3e-45 187.6 205 51.7
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 1.7e-45 187.2 209 50.7
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 2.3e-45 186.8 205 50.7
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 2.3e-45 186.8 207 49.3
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 3.0e-45 186.4 201 54.7
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 6.6e-45 185.3 205 49.3
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 6.6e-45 185.3 209 50.7
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 8.6e-45 184.9 198 50.5
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 1.5e-44 184.1 298 42.6
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 1.5e-44 184.1 194 52.1
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 2.5e-44 183.3 207 48.3
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 2.5e-44 183.3 202 52.5
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 3.3e-44 183.0 207 47.8
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 4.3e-44 182.6 204 51.0
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 5.6e-44 182.2 207 47.8
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 9.5e-44 181.4 201 52.7
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 9.5e-44 181.4 207 47.8
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 9.5e-44 181.4 207 48.8
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 1.2e-43 181.0 207 48.8
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 1.2e-43 181.0 200 51.5
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 1.2e-43 181.0 207 49.8
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 1.6e-43 180.6 248 44.8
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 2.1e-43 180.3 206 52.4
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 2.1e-43 180.3 199 50.3
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 2.1e-43 180.3 204 50.0
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 2.1e-43 180.3 204 50.5
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 2.8e-43 179.9 209 49.3
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 1.1e-42 177.9 207 47.3
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 1.4e-42 177.6 210 50.0
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 1.4e-42 177.6 205 51.7
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 3.1e-42 176.4 179 54.7
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 4.0e-42 176.0 202 50.0
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 6.8e-42 175.3 266 41.7
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 8.9e-42 174.9 207 46.9
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 8.9e-42 174.9 198 48.5
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 1.2e-41 174.5 243 42.4
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 2.6e-41 173.3 208 49.5
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 2.6e-41 173.3 254 43.7
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 5.8e-41 172.2 161 58.4
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 7.5e-41 171.8 236 49.2
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 9.9e-41 171.4 205 48.8
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 9.9e-41 171.4 155 60.0
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 1.7e-40 170.6 215 47.0
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 1.7e-40 170.6 198 47.0
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 2.2e-40 170.2 234 46.6
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 2.9e-40 169.9 215 44.7
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 1.1e-39 167.9 197 47.2
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 3.2e-39 166.4 234 43.2
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 4.1e-39 166.0 207 45.9
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 4.1e-39 166.0 217 49.3
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 2.7e-38 163.3 193 50.8
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 7.8e-38 161.8 208 44.7
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 7.8e-38 161.8 204 46.6
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 1.0e-37 161.4 197 48.2
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 2.5e-36 156.8 153 57.5
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 5.2e-34 149.1 199 43.2
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 1.2e-33 147.9 197 44.7
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 5.4e-31 139.0 202 43.1
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 7.1e-31 138.7 183 45.9
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 1.6e-30 137.5 164 45.7
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 1.4e-26 124.4 272 35.3
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 1.2e-25 121.3 202 37.1
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 1.2e-22 111.3 202 37.6
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 3.4e-17 93.2 233 30.0
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 2.2e-16 90.5 58 75.9
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 5.4e-15 85.9 150 38.0
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 7.1e-15 85.5 96 45.8
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 1.0e-13 81.6 58 63.8
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 1.3e-13 81.3 104 43.3
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 2.3e-13 80.5 122 41.0
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 2.3e-13 80.5 80 47.5
Eucgr.F00575 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.5e-12 77.8 122 42.6
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 4.3e-12 76.3 78 43.6
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 3.7e-11 73.2 108 38.9
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 9.0e-10 68.6 127 37.0
TAR628G0560 Trochodendron aralioides HOM05D006975 ORTHO05D008736 9.9e-09 65.1 81 46.9
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 4.2e-07 59.7 67 52.2
Eucgr.H00983 Eucalyptus grandis HOM05D006975 ORTHO05D008736 7.1e-07 58.9 50 58.0
Eucgr.H00986 Eucalyptus grandis HOM05D006975 ORTHO05D008736 9.3e-07 58.5 42 61.9


User provided reference genes

Program Settings