Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7692 Utricularia gibba HOM05D004195 ORTHO05D005309 0.0e+00 1268.1 628 100.0
MSTRG.25350 Avicennia marina HOM05D004195 ORTHO05D005309 0.0e+00 1080.1 628 82.8
SalBow7G3728 Salvia bowleyana HOM05D004195 ORTHO05D005309 1.2e-309 1065.8 619 83.0
SGA_v2.0_scaffold7G03728 Striga asiatica HOM05D004195 ORTHO05D005309 1.0e-308 1062.8 626 82.1
Migut.C01079 Erythranthe guttata HOM05D004195 ORTHO05D005309 2.0e-307 1058.5 625 82.4
MSTRG.1402 Avicennia marina HOM05D004195 ORTHO05D005309 8.0e-301 1036.6 622 81.0
PGSC0003DMG400023024 Solanum tuberosum HOM05D004195 ORTHO05D005309 2.2e-298 1028.5 626 79.2
Sopen04g025940 Solanum pennellii HOM05D004195 ORTHO05D005309 5.9e-296 1020.4 624 78.8
Peaxi162Scf00946g00016 Petunia axillaris HOM05D004195 ORTHO05D005309 1.7e-295 1018.8 611 79.1
Manes.18G083251 Manihot esculenta HOM05D004195 ORTHO05D005309 2.3e-295 1018.5 619 78.0
Solyc04g058070.3 Solanum lycopersicum HOM05D004195 ORTHO05D005309 5.0e-295 1017.3 616 79.2
CAN.G405.5 Capsicum annuum HOM05D004195 ORTHO05D005309 2.5e-294 1015.0 625 78.2
Oeu045951.3 Olea europaea HOM05D004195 ORTHO05D005309 6.2e-293 1010.4 641 75.8
Peaxi162Scf00066g00527 Petunia axillaris HOM05D004195 ORTHO05D005309 8.0e-293 1010.0 623 77.7
Thecc.08G133900 Theobroma cacao HOM05D004195 ORTHO05D005309 1.1e-292 1009.6 621 78.3
TAR625G0293 Trochodendron aralioides HOM05D004195 ORTHO05D005309 6.8e-292 1006.9 625 77.0
Ciclev10000592m.g Citrus clementina HOM05D004195 ORTHO05D005309 2.0e-291 1005.4 627 77.0
TWI34G0939 Tripterygium wilfordii HOM05D004195 ORTHO05D005309 2.6e-291 1005.0 619 78.0
Lj7C351T8 Lonicera japonica HOM05D004195 ORTHO05D005309 5.8e-291 1003.8 623 76.4
Cc10_g13640 Coffea canephora HOM05D004195 ORTHO05D005309 3.7e-290 1001.1 621 77.5
Atru.chr13.1591 Acer truncatum HOM05D004195 ORTHO05D005309 1.1e-289 999.6 624 76.9
Sabra02G0060800 Salix brachista HOM05D004195 ORTHO05D005309 1.9e-289 998.8 620 77.6
TAR381G1357 Trochodendron aralioides HOM05D004195 ORTHO05D005309 1.9e-289 998.8 624 76.9
TWI60G0549 Tripterygium wilfordii HOM05D004195 ORTHO05D005309 1.2e-288 996.1 616 77.1
Potri.002G077400 Populus trichocarpa HOM05D004195 ORTHO05D005309 2.0e-288 995.3 620 76.5
CSS0005980 Camellia sinensis var. sinensis HOM05D004195 ORTHO05D005309 2.7e-288 995.0 627 76.2
Actinidia15207 Actinidia chinensis HOM05D004195 ORTHO05D005309 3.5e-288 994.6 627 77.0
Nitab4.5_0000317g0080 Nicotiana tabacum HOM05D004195 ORTHO05D005309 6.0e-288 993.8 600 79.7
Actinidia21272 Actinidia chinensis HOM05D004195 ORTHO05D005309 7.8e-288 993.4 627 76.6
Cfa018421 Carpinus fangiana HOM05D004195 ORTHO05D005309 1.3e-287 992.6 629 75.4
CiPaw.15G030800 Carya illinoinensis HOM05D004195 ORTHO05D005309 1.7e-287 992.3 629 75.0
HanXRQChr02g0055521 Helianthus annuus HOM05D004195 ORTHO05D005309 2.3e-287 991.9 627 75.4
Gorai.004G254500 Gossypium raimondii HOM05D004195 ORTHO05D005309 3.9e-287 991.1 616 75.8
Gohir.A08G221616 Gossypium hirsutum HOM05D004195 ORTHO05D005309 6.6e-287 990.3 621 75.2
CiPaw.16G022400 Carya illinoinensis HOM05D004195 ORTHO05D005309 1.5e-286 989.2 629 75.2
Aa31LG9G14170 Aethionema arabicum HOM05D004195 ORTHO05D005309 2.5e-286 988.4 625 76.3
AUR62007701 Chenopodium quinoa HOM05D004195 ORTHO05D005309 2.5e-286 988.4 621 76.8
THA.LOC104808371 Tarenaya hassleriana HOM05D004195 ORTHO05D000001 3.3e-286 988.0 596 78.9
Sp4g04790 Schrenkiella parvula HOM05D004195 ORTHO05D005309 9.5e-286 986.5 608 77.8
CsaV3_6G034020 Cucumis sativus L. HOM05D004195 ORTHO05D005309 1.2e-285 986.1 609 78.7
FAN20G1489 Fragaria x ananassa HOM05D004195 ORTHO05D005309 1.6e-285 985.7 614 77.2
MELO3C008467.2 Cucumis melo HOM05D004195 ORTHO05D005309 2.1e-285 985.3 615 78.2
A09p55650 Brassica napus HOM05D004195 ORTHO05D005309 6.2e-285 983.8 625 76.5
BraA09t40966Z Brassica rapa HOM05D004195 ORTHO05D005309 8.1e-285 983.4 625 76.5
Rhsim11G0072300 Rhododendron simsii HOM05D004195 ORTHO05D005309 1.1e-284 983.0 673 71.5
C08p38640 Brassica napus HOM05D004195 ORTHO05D005309 1.4e-284 982.6 609 77.5
PGR042G0897 Punica granatum HOM05D004195 ORTHO05D005309 1.4e-284 982.6 628 75.2
Sed0021205 Sechium edule HOM05D004195 ORTHO05D005309 1.4e-284 982.6 613 77.8
BcaC07g40866 Brassica carinata HOM05D004195 ORTHO05D005309 5.2e-284 980.7 609 77.5
BolC8t51435H Brassica oleracea HOM05D004195 ORTHO05D005309 5.2e-284 980.7 609 77.5
RcHm_v2.0_Chr6g0296821 Rosa chinensis HOM05D004195 ORTHO05D005309 6.8e-284 980.3 592 78.4
BcaB08g35185 Brassica carinata HOM05D004195 ORTHO05D005309 4.4e-283 977.6 625 75.5
Gohir.D03G063000 Gossypium hirsutum HOM05D004195 ORTHO05D005309 5.8e-283 977.2 629 74.7
Gorai.013G108400 Gossypium raimondii HOM05D004195 ORTHO05D005309 1.3e-282 976.1 629 74.9
ClCG08G006050 Citrullus lanatus HOM05D004195 ORTHO05D005309 8.3e-282 973.4 616 77.8
CARHR265560 Cardamine hirsuta HOM05D004195 ORTHO05D005309 1.1e-281 973.0 612 76.6
Nitab4.5_0002557g0050 Nicotiana tabacum HOM05D004195 ORTHO05D005309 1.1e-281 973.0 624 76.0
PSO729G0087 Papaver somniferum HOM05D004195 ORTHO05D005309 1.4e-281 972.6 615 75.4
HanXRQChr14g0452241 Helianthus annuus HOM05D004195 ORTHO05D005309 3.2e-281 971.5 629 73.8
DCAR_003592 Daucus carota HOM05D004195 ORTHO05D005309 4.1e-281 971.1 644 73.1
Nn5g28450 Nelumbo nucifera HOM05D004195 ORTHO05D005309 7.1e-281 970.3 576 79.9
Hund17352 Selenicereus undatus HOM05D004195 ORTHO05D005309 7.1e-281 970.3 647 73.7
EL10Ac1g01366 Beta vulgaris HOM05D004195 ORTHO05D005309 1.6e-280 969.1 621 74.9
AT5G52560 Arabidopsis thaliana HOM05D004195 ORTHO05D005309 2.1e-280 968.8 607 76.4
Aqoxy6G00296 Aquilegia oxysepala HOM05D004195 ORTHO05D005309 2.7e-280 968.4 609 76.2
MD15G1133100 Malus domestica HOM05D004195 ORTHO05D005309 3.5e-280 968.0 610 76.2
AL8G27030 Arabidopsis lyrata HOM05D004195 ORTHO05D005309 4.6e-280 967.6 607 76.3
Carub.0008s1270 Capsella rubella HOM05D004195 ORTHO05D005309 1.0e-279 966.5 607 75.9
PSO724G0104 Papaver somniferum HOM05D004195 ORTHO05D005309 1.7e-279 965.7 605 75.2
Prupe.1G488700 Prunus persica HOM05D004195 ORTHO05D005309 1.7e-279 965.7 613 76.0
Lalb_Chr23g0271201 Lupinus albus HOM05D004195 ORTHO05D005309 8.6e-279 963.4 604 76.3
FAN27G3503 Fragaria x ananassa HOM05D004195 ORTHO05D005309 1.1e-278 963.0 652 72.5
VMungo1309G1545 Vigna mungo HOM05D004195 ORTHO05D005309 7.3e-278 960.3 601 76.5
ECA238G0374 Erigeron canadensis HOM05D004195 ORTHO05D005309 3.6e-277 958.0 626 73.0
Eucgr.F03856 Eucalyptus grandis HOM05D004195 ORTHO05D005309 1.1e-276 956.4 631 73.1
FAN15G2696 Fragaria x ananassa HOM05D004195 ORTHO05D005309 2.4e-276 955.3 652 72.2
FAN24G0605 Fragaria x ananassa HOM05D004195 ORTHO05D005309 2.4e-276 955.3 650 72.3
Dinv14704 Davidia involucrata HOM05D004195 ORTHO05D005309 3.1e-276 954.9 633 74.2
Phvul.009G130500 Phaseolus vulgaris HOM05D004195 ORTHO05D005309 4.0e-276 954.5 601 76.2
Lsat_1_v5_gn_2_99200 Lactuca sativa HOM05D004195 ORTHO05D005309 1.2e-275 953.0 628 73.4
GSVIVG01008799001 Vitis vinifera HOM05D004195 ORTHO05D005309 3.4e-275 951.4 642 72.7
SGA_v2.0_scaffold52G18908 Striga asiatica HOM05D004195 ORTHO05D005309 7.6e-275 950.3 571 80.9
TPR.G6326 Trifolium pratense HOM05D004195 ORTHO05D005309 1.3e-274 949.5 601 75.2
Medtr3g088650 Medicago truncatula HOM05D004195 ORTHO05D005309 2.2e-274 948.7 599 75.8
ECA233G3807 Erigeron canadensis HOM05D004195 ORTHO05D005309 2.9e-274 948.3 603 74.1
CANSAT25G3797 Cannabis sativa HOM05D004195 ORTHO05D005309 6.4e-274 947.2 632 72.9
Glyma.04G245100 Glycine max HOM05D004195 ORTHO05D005309 6.4e-274 947.2 623 73.7
Lj1g0006497 Lotus japonicus HOM05D004195 ORTHO05D005309 1.4e-273 946.0 602 75.6
Psat5g084360 Pisum sativum HOM05D004195 ORTHO05D005309 2.4e-273 945.3 599 75.1
PSO541G1755 Papaver somniferum HOM05D004195 ORTHO05D005309 3.2e-273 944.9 613 73.2
vmacro00869 Vaccinium macrocarpon HOM05D004195 ORTHO05D005309 5.1e-271 937.6 627 73.2
Zm00001eb226930 Zea mays HOM05D004195 ORTHO05D005309 1.1e-270 936.4 625 71.5
Thhalv10000457m.g Eutrema salsugineum HOM05D004195 ORTHO05D005309 4.3e-270 934.5 608 74.5
FvH4_2g28000 Fragaria vesca HOM05D004195 ORTHO05D005309 4.6e-264 914.4 588 75.3
Os06g0701200 Oryza sativa ssp. japonica HOM05D004195 ORTHO05D005309 4.6e-264 914.4 611 72.2
HPP92_009336 Vanilla planifolia HOM05D004195 ORTHO05D005309 8.7e-263 910.2 622 70.4
HPP92_005775 Vanilla planifolia HOM05D004195 ORTHO05D005309 7.3e-262 907.1 619 71.2
ATR1001G002 Amborella trichopoda HOM05D004195 ORTHO05D005309 2.4e-260 902.1 621 69.2
SEGI_41147 Sequoiadendron giganteum HOM05D004195 ORTHO05D005309 1.7e-258 896.0 627 68.7
CDE07G0325 Ceratophyllum demersum HOM05D004195 ORTHO05D005309 1.9e-257 892.5 620 69.4
Gohir.A05G238300 Gossypium hirsutum HOM05D004195 ORTHO05D005309 3.5e-256 888.3 631 69.1
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 3.0e-255 885.2 576 73.6
Sc26g0002830 Simmondsia chinensis HOM05D004195 ORTHO05D005309 1.1e-254 883.2 567 75.0
Gohir.A10G100400 Gossypium hirsutum HOM05D004195 ORTHO05D005309 8.1e-253 877.1 565 74.2
arahy.Tifrunner.gnm1.ann1.8W34DS Arachis hypogaea HOM05D004195 ORTHO05D005309 5.3e-252 874.4 549 76.3
Ca_16614_v3 Cicer arietinum L. HOM05D004195 ORTHO05D005309 2.6e-251 872.1 549 76.3
Haze_17642 Corylus avellana HOM05D004195 ORTHO05D005309 1.7e-250 869.4 640 67.7
arahy.Tifrunner.gnm1.ann1.MX6LT2 Arachis hypogaea HOM05D004195 ORTHO05D005309 1.4e-249 866.3 556 75.4
arahy.Tifrunner.gnm1.ann1.TVXF2I Arachis hypogaea HOM05D004195 ORTHO05D005309 1.4e-249 866.3 556 75.4
PSO675G4690 Papaver somniferum HOM05D004195 ORTHO05D005309 4.0e-244 848.2 581 69.7
Cpa.g.sc64.151 Carica papaya HOM05D004195 ORTHO05D005309 2.6e-243 845.5 516 78.5
HPP92_005816 Vanilla planifolia HOM05D004195 ORTHO05D005309 8.4e-242 840.5 619 67.2
BcaB08g36106 Brassica carinata HOM05D004195 ORTHO05D005309 1.1e-241 840.1 607 69.7
Ah.04g163390 Amaranthus hybridus HOM05D004195 ORTHO05D005309 4.1e-236 821.6 515 76.5
Hma1.2p1_0880F.1_g231850 Hydrangea macrophylla HOM05D004195 ORTHO05D005309 1.5e-235 819.7 490 80.4
SHI09238 Sapria himalayana HOM05D004195 ORTHO05D005309 3.2e-233 812.0 622 64.6
Lj4C664G15 Lonicera japonica HOM05D004195 ORTHO05D005309 1.1e-230 803.5 588 68.2
SMO144G0039 Selaginella moellendorffii HOM05D004195 ORTHO05D005309 2.2e-226 789.3 586 64.7
Pp3c14_26160 Physcomitrium patens HOM05D004195 ORTHO05D005309 3.9e-223 778.5 606 61.7
Mapoly0020s0171 Marchantia polymorpha HOM05D004195 ORTHO05D005309 2.4e-220 769.2 593 62.9
Glyma.06G118100 Glycine max HOM05D004195 ORTHO05D005309 9.4e-217 757.3 465 77.6
Duzib093G0036 Durio zibethinus HOM05D004195 ORTHO05D005309 3.9e-215 751.9 988 44.3
AUR62013440 Chenopodium quinoa HOM05D004195 ORTHO05D005309 1.3e-210 736.9 442 79.4
Lj4A674G55 Lonicera japonica HOM05D004195 ORTHO05D005309 1.3e-205 720.3 589 62.1
Gohir.A02G111000 Gossypium hirsutum HOM05D004195 ORTHO05D005309 7.7e-203 711.1 423 79.0
CBR_g38016 Chara braunii HOM05D004195 ORTHO05D005309 2.2e-197 693.0 618 57.9
Cre14.g621751 Chlamydomonas reinhardtii HOM05D004195 ORTHO05D005309 4.1e-180 635.6 606 55.3
MCO16G082 Micromonas commoda HOM05D004195 ORTHO05D005309 3.6e-176 622.5 608 51.6
AagrBONN_evm.TU.Sc2ySwM_228.475 Anthoceros agrestis HOM05D004195 ORTHO05D005309 1.3e-165 587.4 428 65.2
Dinv27262 Davidia involucrata HOM05D004195 ORTHO05D005309 3.3e-161 572.8 337 80.1
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 3.3e-161 572.8 510 58.6
PRCOL_00000078 Prasinoderma coloniale HOM05D004195 ORTHO05D005309 5.2e-159 565.5 619 48.8
SEGI_17681 Sequoiadendron giganteum HOM05D004195 ORTHO05D005309 1.1e-156 557.8 387 69.5
Zm00001eb272890 Zea mays HOM05D004195 ORTHO05D005309 5.1e-154 548.9 341 75.1
Gorai.005G087200 Gossypium raimondii HOM05D004195 ORTHO05D005309 6.2e-152 542.0 525 56.0
Manes.02G169300 Manihot esculenta HOM05D004195 ORTHO05D005309 1.2e-142 511.1 355 69.9
Sed0024885 Sechium edule HOM05D004195 ORTHO05D005309 4.6e-115 419.5 272 75.7
CDE06G0343 Ceratophyllum demersum HOM05D004195 ORTHO05D005309 6.1e-115 419.1 270 72.2
Pp3c7_22840 Physcomitrium patens HOM05D004195 ORTHO05D005309 6.7e-114 415.6 543 42.7
CDE06G1518 Ceratophyllum demersum HOM05D004195 ORTHO05D005309 1.4e-108 397.9 315 62.2
Gohir.D02G077650 Gossypium hirsutum HOM05D004195 ORTHO05D005309 1.2e-107 394.8 424 53.1
HPP92_005823 Vanilla planifolia HOM05D004195 ORTHO05D005309 2.7e-99 367.1 271 64.9
Zm00001eb215830 Zea mays HOM05D004195 ORTHO05D005309 1.7e-96 357.8 213 79.3
Dinv27263 Davidia involucrata HOM05D004195 ORTHO05D005309 3.5e-78 297.0 200 73.5
Duzib116G0462 Durio zibethinus HOM05D004195 ORTHO05D005309 1.4e-74 285.0 380 44.5
Sopen04g025970 Solanum pennellii HOM05D004195 ORTHO05D005309 4.9e-72 276.6 183 73.8
Zm00001eb237030 Zea mays HOM05D004195 ORTHO05D005309 2.9e-69 267.3 151 82.8
AUR62013439 Chenopodium quinoa HOM05D004195 ORTHO05D005309 6.1e-67 259.6 187 69.0
HPP92_009371 Vanilla planifolia HOM05D004195 ORTHO05D005309 1.6e-46 191.8 128 69.5
Lsat_1_v5_gn_6_43121 Lactuca sativa HOM05D004195 ORTHO05D005309 3.0e-45 187.6 260 45.0
Sed0012376 Sechium edule HOM05D004195 ORTHO05D005309 1.1e-44 185.7 126 72.2
Lsat_1_v5_gn_6_45121 Lactuca sativa HOM05D004195 ORTHO05D035846 2.1e-43 181.4 253 41.9
Lsat_1_v5_gn_6_43041 Lactuca sativa HOM05D004195 ORTHO05D035846 4.3e-36 157.1 407 28.7
Cpa.g.c44850 Carica papaya HOM05D004195 ORTHO05D005309 4.0e-34 150.6 109 68.8
Gohir.D08G239084 Gossypium hirsutum HOM05D004195 ORTHO05D005309 3.4e-33 147.5 107 68.2
FAN15G2766 Fragaria x ananassa HOM05D004195 ORTHO05D005309 4.9e-32 143.7 109 60.6
Ah.04g163400 Amaranthus hybridus HOM05D004195 ORTHO05D005309 6.6e-29 133.3 90 67.8
Hund26746 Selenicereus undatus HOM05D004195 ORTHO05D005309 1.1e-26 125.9 107 60.7
Duzib213G0704 Durio zibethinus HOM05D004195 ORTHO05D005309 5.4e-23 113.6 80 65.0
QL10p065861 Quercus lobata HOM05D001716 ORTHO05D004234 6.0e-22 110.2 56 89.3
VMungo0720G0521 Vigna mungo HOM05D000196 ORTHO05D000279 1.0e-21 109.4 88 56.8
MCO02G083 Micromonas commoda HOM05D003927 ORTHO05D004905 2.3e-21 108.2 307 25.1
vmacro11216 Vaccinium macrocarpon HOM05D004195 ORTHO05D050721 5.6e-20 103.6 92 58.7
Hma1.2p1_0349F.1_g132280 Hydrangea macrophylla HOM05D004195 ORTHO05D005309 2.8e-19 101.3 70 64.3
Hund26745 Selenicereus undatus HOM05D004195 ORTHO05D005309 2.4e-18 98.2 69 68.1
SMO351G0243 Selaginella moellendorffii HOM05D003927 ORTHO05D004905 3.1e-18 97.8 345 27.0
AagrBONN_evm.TU.Sc2ySwM_228.1844 Anthoceros agrestis HOM05D007300 ORTHO05D004905 6.9e-18 96.7 196 29.6
Mapoly0019s0078 Marchantia polymorpha HOM05D007300 ORTHO05D009301 7.6e-17 93.2 207 27.1
Lsat_1_v5_gn_2_61101 Lactuca sativa HOM05D003927 ORTHO05D004905 6.5e-16 90.1 346 26.3
Os08g0206900 Oryza sativa ssp. japonica HOM05D003927 ORTHO05D004905 2.1e-14 85.1 234 28.2
Pp3c15_14250 Physcomitrium patens HOM05D007300 ORTHO05D009301 2.7e-14 84.7 230 22.6
CANSAT54G2179 Cannabis sativa HOM05D005470 ORTHO05D006855 1.3e-13 82.4 50 74.0
Haze_26176 Corylus avellana HOM05D003927 ORTHO05D004905 3.3e-12 77.8 229 26.2
FAN26G1170 Fragaria x ananassa HOM05D004195 ORTHO05D035846 1.6e-11 75.5 37 89.2
Hma1.2p1_2689F.1_g326990 Hydrangea macrophylla HOM05D004195 ORTHO05D005309 2.4e-10 71.6 59 52.5
RcHm_v2.0_Chr3g0470721 Rosa chinensis HOM05D004195 ORTHO05D050721 4.1e-10 70.9 39 87.2
Gohir.D07G155733 Gossypium hirsutum HOM05D004195 ORTHO05D217344 6.9e-10 70.1 42 73.8
MBI11_g47560_MAGBIO Magnolia biondii HOM05D002408 ORTHO05D002534 1.5e-09 68.9 45 66.7
QL05p063882 Quercus lobata HOM05D001716 ORTHO05D004234 4.5e-09 67.4 35 85.7
Lsat_1_v5_gn_3_55481 Lactuca sativa HOM05D002352 ORTHO05D011576 1.1e-07 62.8 32 81.2
MBI15_g02237_MAGBIO Magnolia biondii HOM05D000738 ORTHO05D011926 3.2e-07 61.2 63 54.0
Lsat_1_v5_gn_7_13280 Lactuca sativa HOM05D002352 ORTHO05D000385 1.6e-06 58.9 32 75.0
Lsat_1_v5_gn_9_125000 Lactuca sativa HOM05D004195 ORTHO05D005309 2.1e-06 58.5 72 40.3
Sc09g0004470 Simmondsia chinensis HOM05D001733 ORTHO05D001882 6.1e-06 57.0 288 22.9


User provided reference genes

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