Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 0.0e+00 1374.8 683 100.0
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 6.1e-137 492.3 729 43.3
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 4.1e-133 479.6 703 44.0
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 1.3e-131 474.6 682 43.1
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 4.3e-130 469.5 738 40.5
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 2.8e-129 466.8 687 41.5
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.8e-128 464.2 724 42.3
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 1.4e-125 454.5 649 42.1
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 4.7e-121 439.5 707 39.2
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 4.0e-120 436.4 647 40.6
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 1.7e-118 431.0 725 39.2
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 2.2e-118 430.6 645 40.3
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 6.4e-118 429.1 634 42.7
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 7.0e-117 425.6 650 40.5
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 7.0e-117 425.6 660 41.5
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 1.2e-116 424.9 645 39.4
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 1.6e-116 424.5 589 42.6
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.7e-116 423.7 650 40.5
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 1.7e-115 421.0 695 39.0
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 8.6e-115 418.7 670 39.0
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 2.5e-114 417.2 647 40.5
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 4.7e-113 412.9 653 40.0
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 1.4e-112 411.4 645 39.2
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 1.4e-112 411.4 647 39.7
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 1.8e-112 411.0 645 39.2
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 2.3e-112 410.6 697 38.0
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 3.1e-112 410.2 695 37.4
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 5.2e-112 409.5 689 38.3
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 2.0e-111 407.5 643 37.9
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 2.6e-111 407.1 647 39.3
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 2.6e-111 407.1 632 38.9
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 3.4e-111 406.8 645 38.6
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 4.4e-111 406.4 587 41.2
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 5.8e-111 406.0 655 39.7
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 1.3e-110 404.8 642 39.9
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 1.7e-110 404.4 627 39.7
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 2.9e-110 403.7 655 39.8
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 3.7e-110 403.3 645 39.2
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 4.9e-110 402.9 655 39.5
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 1.4e-109 401.4 658 38.8
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 3.2e-109 400.2 650 39.5
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 3.2e-109 400.2 651 38.7
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 3.2e-109 400.2 632 40.5
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 5.4e-109 399.4 646 39.9
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 1.6e-108 397.9 650 38.5
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 3.5e-108 396.7 664 38.7
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 6.0e-108 396.0 648 39.4
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 1.1e-106 391.7 660 39.7
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 1.9e-106 391.0 643 37.0
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 2.5e-106 390.6 639 39.1
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 2.5e-106 390.6 657 37.1
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 2.8e-105 387.1 639 38.3
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 1.8e-104 384.4 624 37.5
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 5.2e-104 382.9 645 38.1
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 5.2e-104 382.9 661 37.8
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 2.6e-103 380.6 636 38.1
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 3.4e-103 380.2 611 39.1
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 9.9e-103 378.6 640 37.8
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 9.9e-103 378.6 644 37.7
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 2.2e-102 377.5 527 41.6
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 2.2e-102 377.5 653 37.2
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 1.4e-101 374.8 642 37.7
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 3.2e-101 373.6 697 37.3
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 4.1e-101 373.2 641 38.1
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 4.1e-101 373.2 641 38.1
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 5.4e-101 372.9 647 37.7
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 2.1e-100 370.9 676 36.2
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 2.1e-100 370.9 681 36.3
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 2.7e-100 370.5 690 35.9
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 3.5e-100 370.2 683 36.6
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 6.0e-100 369.4 642 37.7
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 6.0e-100 369.4 625 39.4
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.7e-99 367.9 631 38.0
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 2.3e-99 367.5 642 37.7
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 9.6e-98 362.1 618 37.4
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 8.1e-97 359.0 657 35.3
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 8.1e-97 359.0 661 36.6
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 8.1e-97 359.0 516 41.1
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 7.6e-95 352.4 527 40.2
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 1.4e-93 348.2 693 33.6
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.4e-88 331.6 598 38.5
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 2.6e-87 327.4 653 33.7
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 8.4e-86 322.4 410 46.3
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 2.1e-84 317.8 436 40.1
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 3.9e-83 313.5 456 39.9
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 3.7e-81 307.0 673 35.5
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 6.2e-81 306.2 647 34.6
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 3.5e-68 263.8 496 37.9
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 1.3e-67 261.9 362 42.3
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 1.1e-66 258.8 430 40.7
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 1.5e-66 258.5 509 35.2
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 4.8e-65 253.4 381 39.9
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 2.7e-60 237.7 310 42.9
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 2.5e-58 231.1 642 29.9
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 9.7e-58 229.2 340 40.6
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 2.8e-57 227.6 340 42.4
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 3.7e-57 227.3 352 42.3
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 2.4e-56 224.6 707 27.2
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 6.9e-56 223.0 323 39.6
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 9.4e-53 212.6 269 43.5
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 3.6e-52 210.7 514 31.3
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 1.5e-47 195.3 612 26.3
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 8.5e-46 189.5 308 37.7
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 1.9e-45 188.3 317 37.9
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 3.9e-43 180.6 306 40.2
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 1.8e-40 171.8 172 48.8
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 5.3e-40 170.2 296 37.5
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 1.2e-39 169.1 283 40.3
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 8.5e-38 162.9 149 57.0
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 8.0e-36 156.4 214 43.9
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 5.9e-31 140.2 149 45.6
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 8.5e-30 136.3 449 28.1
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 9.4e-29 132.9 298 35.2
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 9.4e-29 132.9 145 47.6
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.4e-24 118.2 234 34.6
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 2.8e-20 104.8 132 41.7
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-16 91.3 126 40.5
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 2.8e-12 78.2 94 44.7
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.0e-10 72.0 189 30.2
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 7.5e-10 70.1 133 33.1
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 8.3e-09 66.6 96 38.5
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 3.2e-08 64.7 257 24.9
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 5.4e-08 63.9 142 31.0
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 3.0e-06 58.2 100 35.0


User provided reference genes

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