Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 2.6e-155 552.0 275 100.0
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 4.8e-64 248.8 367 42.5
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 4.4e-62 242.3 378 42.1
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 6.6e-58 228.4 382 39.3
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 2.1e-56 223.4 380 40.0
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 3.6e-56 222.6 380 40.0
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 6.2e-56 221.9 380 39.7
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 6.2e-56 221.9 380 40.0
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 1.1e-55 221.1 380 39.5
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 9.0e-55 218.0 380 39.5
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 7.6e-54 214.9 380 38.2
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 9.9e-54 214.5 388 38.4
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 2.4e-52 209.9 380 38.4
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 4.2e-52 209.1 380 37.6
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 7.1e-52 208.4 381 37.5
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 3.5e-51 206.1 382 35.6
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 7.9e-51 204.9 381 35.4
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 8.7e-50 201.4 379 36.1
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 1.1e-49 201.1 380 36.6
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 1.1e-49 201.1 371 36.4
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 1.9e-49 200.3 378 36.5
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 2.1e-48 196.8 380 35.8
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 2.8e-48 196.4 379 36.1
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 3.7e-48 196.1 380 35.8
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 1.1e-47 194.5 338 38.5
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 1.8e-47 193.7 368 37.8
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 1.8e-47 193.7 382 35.6
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 2.4e-47 193.4 366 35.2
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 2.4e-47 193.4 376 36.2
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 2.4e-47 193.4 380 34.7
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 6.9e-47 191.8 380 35.3
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 6.9e-47 191.8 383 35.0
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 2.0e-46 190.3 380 34.5
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 2.6e-46 189.9 369 35.8
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 4.5e-46 189.1 369 34.4
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 1.3e-45 187.6 376 35.1
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 2.2e-45 186.8 380 34.7
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 2.9e-45 186.4 377 36.1
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 4.9e-45 185.7 375 34.7
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 1.4e-44 184.1 340 37.9
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 1.9e-44 183.7 388 34.0
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 4.2e-44 182.6 377 35.3
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 4.2e-44 182.6 376 34.6
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 1.6e-43 180.6 381 33.9
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 2.7e-43 179.9 379 34.6
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 3.5e-43 179.5 379 34.8
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 4.6e-43 179.1 379 34.6
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 6.0e-43 178.7 382 34.8
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 1.3e-42 177.6 369 35.8
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 1.3e-42 177.6 375 34.7
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 2.3e-42 176.8 385 34.0
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 6.7e-42 175.3 380 33.9
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 8.7e-42 174.9 360 34.7
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 1.1e-41 174.5 351 35.3
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 1.1e-41 174.5 380 33.4
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 1.1e-41 174.5 379 34.8
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 1.9e-41 173.7 378 33.1
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 2.5e-41 173.3 380 34.7
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 4.3e-41 172.6 382 33.8
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 1.6e-40 170.6 385 33.5
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 5.3e-39 165.6 377 34.5
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 5.3e-39 165.6 382 32.2
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 4.5e-38 162.5 384 34.1
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 4.5e-38 162.5 395 33.4
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 5.9e-38 162.2 368 33.7
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 5.9e-38 162.2 368 33.2
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.0e-37 161.4 382 33.0
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 2.9e-37 159.8 393 30.8
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 2.9e-37 159.8 384 33.3
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 3.8e-37 159.5 334 33.2
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 8.4e-37 158.3 382 32.5
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 1.4e-36 157.5 363 32.0
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 2.5e-36 156.8 384 32.0
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 2.5e-36 156.8 384 32.0
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 1.2e-35 154.5 376 32.7
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.2e-35 154.5 387 31.8
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 4.6e-35 152.5 385 31.4
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 6.1e-35 152.1 348 33.9
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 1.0e-34 151.4 382 31.7
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 1.3e-34 151.0 389 32.1
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 1.8e-34 150.6 387 30.7
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 1.8e-34 150.6 334 33.5
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 6.7e-34 148.7 383 30.5
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 6.7e-34 148.7 387 31.0
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 2.5e-33 146.7 387 30.5
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 2.5e-33 146.7 387 30.5
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 1.3e-32 144.4 400 31.8
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 3.1e-31 139.8 150 46.7
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 9.0e-31 138.3 353 33.7
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 3.8e-29 132.9 375 30.9
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 5.0e-29 132.5 151 45.0
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 2.5e-28 130.2 150 44.0
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 2.7e-27 126.7 383 30.0
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 6.1e-27 125.6 390 28.5
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 1.0e-26 124.8 150 43.3
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 1.1e-25 121.3 381 28.6
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 1.1e-25 121.3 389 28.0
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 2.8e-24 116.7 149 42.3
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 1.4e-23 114.4 347 28.8
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 2.4e-23 113.6 114 57.0
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.2e-22 111.3 130 49.2
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 4.5e-22 109.4 136 46.3
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 7.7e-22 108.6 344 29.4
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 1.7e-21 107.5 114 52.6
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 2.7e-19 100.1 114 50.9
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 1.0e-18 98.2 150 40.0
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 3.9e-18 96.3 114 50.0
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 7.4e-17 92.0 82 58.5
Sabra17G0095800 Salix brachista HOM05D006028 ORTHO05D007784 8.2e-16 88.6 150 39.3
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 3.1e-15 86.7 120 45.0
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 1.2e-14 84.7 106 47.2
Nitab4.5_0014016g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 2.0e-14 84.0 82 53.7
Gorai.007G000700 Gossypium raimondii HOM05D006028 ORTHO05D007784 3.5e-14 83.2 152 35.5
FAN17G0046 Fragaria x ananassa HOM05D006028 ORTHO05D007784 1.1e-12 78.2 182 33.5
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 6.1e-11 72.4 88 44.3
AagrBONN_evm.TU.Sc2ySwM_368.1687 Anthoceros agrestis HOM05D006028 ORTHO05D007784 5.7e-09 65.9 150 25.3
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.4e-07 61.2 99 36.4
Gohir.A06G000200 Gossypium hirsutum HOM05D006028 ORTHO05D007784 5.3e-07 59.3 77 37.7
Gohir.A12G000400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 5.3e-07 59.3 77 37.7
CBR_g37698 Chara braunii HOM05D006028 ORTHO05D007784 9.1e-07 58.5 41 70.7
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 9.1e-07 58.5 78 35.9


User provided reference genes

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