Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21791 Utricularia gibba HOM05D000161 ORTHO05D009031 0.0e+00 1752.3 862 100.0
MSTRG.18182 Avicennia marina HOM05D000161 ORTHO05D009031 0.0e+00 1226.1 865 71.1
Migut.D00162 Erythranthe guttata HOM05D000161 ORTHO05D009031 0.0e+00 1213.4 868 69.1
SGA_v2.0_scaffold1G00398 Striga asiatica HOM05D000161 ORTHO05D009031 0.0e+00 1211.4 867 69.1
Dinv33015 Davidia involucrata HOM05D000161 ORTHO05D009031 0.0e+00 1179.5 863 68.3
Gohir.A11G116600 Gossypium hirsutum HOM05D000161 ORTHO05D009031 0.0e+00 1168.7 813 69.9
COL.COLO4_08004 Corchorus olitorius HOM05D000161 ORTHO05D009031 0.0e+00 1166.8 804 71.1
vmacro02493 Vaccinium macrocarpon HOM05D000161 ORTHO05D009031 0.0e+00 1166.8 881 66.1
Actinidia00683 Actinidia chinensis HOM05D000161 ORTHO05D009031 0.0e+00 1165.6 806 70.0
Gohir.D11G121700 Gossypium hirsutum HOM05D000161 ORTHO05D009031 0.0e+00 1164.8 813 69.6
Cc01_g20450 Coffea canephora HOM05D000161 ORTHO05D009031 0.0e+00 1162.1 823 68.9
Gorai.007G130400 Gossypium raimondii HOM05D000161 ORTHO05D009031 0.0e+00 1158.7 813 69.4
Oeu057577.1 Olea europaea HOM05D000161 ORTHO05D009031 0.0e+00 1158.7 809 70.2
GSVIVG01010978001 Vitis vinifera HOM05D000161 ORTHO05D009031 0.0e+00 1158.7 801 70.4
SalBow3G3810 Salvia bowleyana HOM05D000161 ORTHO05D009031 0.0e+00 1155.6 863 67.2
TWI59G0096 Tripterygium wilfordii HOM05D000161 ORTHO05D009031 0.0e+00 1151.0 825 69.2
MD03G1280600 Malus domestica HOM05D000161 ORTHO05D009031 0.0e+00 1148.7 824 67.8
Ciclev10018836m.g Citrus clementina HOM05D000161 ORTHO05D009031 0.0e+00 1148.3 863 66.6
Manes.05G066300 Manihot esculenta HOM05D000161 ORTHO05D009031 0.0e+00 1147.5 814 68.9
Prupe.8G255100 Prunus persica HOM05D000161 ORTHO05D009031 0.0e+00 1146.3 823 67.8
Atru.chr5.1245 Acer truncatum HOM05D000161 ORTHO05D009031 0.0e+00 1145.6 867 66.8
PGSC0003DMG400011361 Solanum tuberosum HOM05D000161 ORTHO05D009031 0.0e+00 1145.6 801 69.2
Duzib138G1706 Durio zibethinus HOM05D000161 ORTHO05D009031 0.0e+00 1142.5 875 66.2
Thecc.01G293400 Theobroma cacao HOM05D000161 ORTHO05D009031 0.0e+00 1139.0 829 68.4
Cfa005996 Carpinus fangiana HOM05D000161 ORTHO05D009031 0.0e+00 1138.3 823 67.9
CANSAT25G3411 Cannabis sativa HOM05D000161 ORTHO05D009031 0.0e+00 1134.0 819 67.5
CiPaw.07G102700 Carya illinoinensis HOM05D000161 ORTHO05D009031 0.0e+00 1132.1 865 65.8
Solyc09g074660.3 Solanum lycopersicum HOM05D000161 ORTHO05D009031 0.0e+00 1132.1 817 67.4
Potri.002G209900 Populus trichocarpa HOM05D000161 ORTHO05D009031 0.0e+00 1131.7 822 67.6
Sopen09g029540 Solanum pennellii HOM05D000161 ORTHO05D009031 0.0e+00 1130.5 795 68.6
CAN.G1777.2 Capsicum annuum HOM05D000161 ORTHO05D009031 0.0e+00 1127.9 860 64.5
TAR362G0905 Trochodendron aralioides HOM05D000161 ORTHO05D009031 0.0e+00 1127.1 827 67.7
FvH4_2g25030 Fragaria vesca HOM05D000161 ORTHO05D009031 0.0e+00 1125.5 822 66.7
Nitab4.5_0001102g0080 Nicotiana tabacum HOM05D000161 ORTHO05D009031 0.0e+00 1125.5 864 65.2
Lj2C1188T5 Lonicera japonica HOM05D000161 ORTHO05D009031 0.0e+00 1124.4 812 67.9
RcHm_v2.0_Chr6g0293001 Rosa chinensis HOM05D000161 ORTHO05D009031 0.0e+00 1120.1 860 64.4
EL10Ac7g17434 Beta vulgaris HOM05D000161 ORTHO05D009031 0.0e+00 1119.4 829 66.9
Sc24g0003880 Simmondsia chinensis HOM05D000161 ORTHO05D009031 0.0e+00 1118.2 823 67.6
Lalb_Chr18g0047291 Lupinus albus HOM05D000161 ORTHO05D009031 0.0e+00 1114.8 816 68.1
PGR044G2096 Punica granatum HOM05D000161 ORTHO05D009031 0.0e+00 1114.8 868 64.4
Medtr7g108310 Medicago truncatula HOM05D000161 ORTHO05D009031 0.0e+00 1113.6 811 67.0
PSO170G2241 Papaver somniferum HOM05D000161 ORTHO05D009031 0.0e+00 1112.8 816 66.4
Phvul.001G204000 Phaseolus vulgaris HOM05D000161 ORTHO05D009031 0.0e+00 1110.9 816 67.2
Ca_09126_v3 Cicer arietinum L. HOM05D000161 ORTHO05D009031 0.0e+00 1110.1 810 67.7
Nitab4.5_0005245g0010 Nicotiana tabacum HOM05D000161 ORTHO05D009031 0.0e+00 1108.2 861 64.0
ECA236G0218 Erigeron canadensis HOM05D000161 ORTHO05D009031 0.0e+00 1107.8 802 66.5
Sabra02G0150400 Salix brachista HOM05D000161 ORTHO05D009031 0.0e+00 1107.8 866 64.2
VMungo1383G3032 Vigna mungo HOM05D000161 ORTHO05D009031 0.0e+00 1107.8 801 67.8
CsaV3_7G028900 Cucumis sativus L. HOM05D000161 ORTHO05D009031 0.0e+00 1106.7 800 66.5
Glyma.03G210900 Glycine max HOM05D000161 ORTHO05D009031 0.0e+00 1105.9 813 67.3
FAN24G1124 Fragaria x ananassa HOM05D000161 ORTHO05D009031 0.0e+00 1103.2 822 66.1
Eucgr.K03449 Eucalyptus grandis HOM05D000161 ORTHO05D009031 0.0e+00 1101.7 868 63.4
ClCG09G006240 Citrullus lanatus HOM05D000161 ORTHO05D009031 0.0e+00 1100.5 812 66.5
TPR.G9287 Trifolium pratense HOM05D000161 ORTHO05D009031 0.0e+00 1099.7 802 66.8
Glyma.19G208100 Glycine max HOM05D000161 ORTHO05D009031 0.0e+00 1096.6 800 67.6
Aqoxy2G03055 Aquilegia oxysepala HOM05D000161 ORTHO05D009031 0.0e+00 1095.5 863 62.8
Lj1g0007269 Lotus japonicus HOM05D000161 ORTHO05D009031 0.0e+00 1095.5 802 67.5
FAN27G3195 Fragaria x ananassa HOM05D000161 ORTHO05D009031 0.0e+00 1094.3 834 65.6
Nn3g21368 Nelumbo nucifera HOM05D000161 ORTHO05D009031 0.0e+00 1094.3 865 62.9
PSO210G6500 Papaver somniferum HOM05D000161 ORTHO05D009031 0.0e+00 1093.6 846 63.9
Haze_04852 Corylus avellana HOM05D000161 ORTHO05D009031 0.0e+00 1091.6 839 65.8
Carub.0006s3386 Capsella rubella HOM05D000161 ORTHO05D009031 0.0e+00 1089.7 822 64.8
Sp6g03230 Schrenkiella parvula HOM05D000161 ORTHO05D009031 0.0e+00 1089.3 863 62.9
HanXRQChr11g0350111 Helianthus annuus HOM05D000161 ORTHO05D009031 0.0e+00 1088.9 817 65.6
Sed0007225 Sechium edule HOM05D000161 ORTHO05D009031 0.0e+00 1087.8 809 65.3
BcaB01g01973 Brassica carinata HOM05D000161 ORTHO05D009031 0.0e+00 1086.6 820 64.8
Rhsim13G0015500 Rhododendron simsii HOM05D000161 ORTHO05D009031 0.0e+00 1086.2 893 61.8
CARHR251630 Cardamine hirsuta HOM05D000161 ORTHO05D009031 0.0e+00 1083.6 870 62.2
Oeu034814.1 Olea europaea HOM05D000161 ORTHO05D009031 0.0e+00 1083.2 830 66.9
Psat3g023920 Pisum sativum HOM05D000161 ORTHO05D009031 0.0e+00 1083.2 811 65.4
C09p02590 Brassica napus HOM05D000161 ORTHO05D009031 0.0e+00 1081.6 820 64.4
AL6G49740 Arabidopsis lyrata HOM05D000161 ORTHO05D009031 0.0e+00 1078.5 866 61.8
BolC9t53189H Brassica oleracea HOM05D000161 ORTHO05D009031 0.0e+00 1078.2 863 62.5
BraA09t35896Z Brassica rapa HOM05D000161 ORTHO05D009031 0.0e+00 1077.8 820 64.1
A09p02490 Brassica napus HOM05D000161 ORTHO05D009031 0.0e+00 1076.2 820 64.0
Thhalv10028434m.g Eutrema salsugineum HOM05D000161 ORTHO05D009031 0.0e+00 1076.2 864 62.6
BcaC04g23994 Brassica carinata HOM05D000161 ORTHO05D009031 5.3e-311 1070.8 864 62.3
ATR0706G016 Amborella trichopoda HOM05D000161 ORTHO05D009031 2.7e-307 1058.5 817 63.4
Lsat_1_v5_gn_8_54360 Lactuca sativa HOM05D000161 ORTHO05D009031 4.9e-301 1037.7 829 62.6
Ah.08g212400 Amaranthus hybridus HOM05D000161 ORTHO05D009031 6.5e-301 1037.3 864 60.8
Aa31LG5G2700 Aethionema arabicum HOM05D000161 ORTHO05D009031 1.2e-299 1033.1 866 61.3
QL12p024497 Quercus lobata HOM05D000161 ORTHO05D009031 1.1e-295 1020.0 742 68.3
arahy.Tifrunner.gnm1.ann1.4BF7AZ Arachis hypogaea HOM05D000161 ORTHO05D009031 5.5e-292 1007.7 753 66.7
Peaxi162Scf00067g01926 Petunia axillaris HOM05D000161 ORTHO05D009031 4.6e-291 1004.6 750 65.3
MBI19_g24003_MAGBIO Magnolia biondii HOM05D000161 ORTHO05D009031 5.7e-289 997.7 816 62.6
Cpa.g.sc441.2 Carica papaya HOM05D000161 ORTHO05D009031 1.3e-285 986.5 651 72.7
MELO3C016048.2 Cucumis melo HOM05D000161 ORTHO05D009031 1.3e-285 986.5 739 65.5
AUR62034669 Chenopodium quinoa HOM05D000161 ORTHO05D009031 9.4e-284 980.3 910 57.0
Lj1A36T49 Lonicera japonica HOM05D000161 ORTHO05D009031 1.4e-282 976.5 805 61.4
DCAR_018348 Daucus carota HOM05D000161 ORTHO05D009031 6.7e-282 974.2 773 63.5
AT4G03200 Arabidopsis thaliana HOM05D000161 ORTHO05D009031 3.2e-276 955.3 739 63.7
CSS0042056 Camellia sinensis var. sinensis HOM05D000161 ORTHO05D009031 2.3e-266 922.5 680 67.8
Mapoly0086s0039 Marchantia polymorpha HOM05D000161 ORTHO05D009031 1.6e-259 899.8 835 53.7
Pp3c3_16890 Physcomitrium patens HOM05D000161 ORTHO05D009031 8.0e-259 897.5 800 55.2
AagrBONN_evm.TU.Sc2ySwM_362.238 Anthoceros agrestis HOM05D000161 ORTHO05D009031 2.3e-250 869.4 805 54.2
arahy.Tifrunner.gnm1.ann1.Z5FZN7 Arachis hypogaea HOM05D000161 ORTHO05D009031 1.2e-249 867.1 604 70.0
Zm00001eb141990 Zea mays HOM05D000161 ORTHO05D009031 2.2e-248 862.8 636 66.4
HPP92_011821 Vanilla planifolia HOM05D000161 ORTHO05D009031 4.0e-234 815.5 624 63.6
AUR62008570 Chenopodium quinoa HOM05D000161 ORTHO05D009031 6.8e-226 788.1 742 56.5
CBR_g39419 Chara braunii HOM05D000019 ORTHO05D000048 5.4e-207 725.3 652 54.0
CDE09G1084 Ceratophyllum demersum HOM05D000161 ORTHO05D009031 6.2e-203 711.8 524 65.3
Cre07.g331250 Chlamydomonas reinhardtii HOM05D000161 ORTHO05D009031 4.4e-148 529.6 851 37.3
Lj1A204T33 Lonicera japonica HOM05D000161 ORTHO05D009031 3.3e-135 486.9 598 46.2
SMO011G0044 Selaginella moellendorffii HOM05D000161 ORTHO05D009031 1.9e-127 461.1 409 54.3
SEGI_38220 Sequoiadendron giganteum HOM05D000161 ORTHO05D009031 2.3e-109 401.0 399 53.1
Os01g0935600 Oryza sativa ssp. japonica HOM05D000161 ORTHO05D009031 2.4e-93 347.8 264 64.4
arahy.Tifrunner.gnm1.ann1.S4ZP24 Arachis hypogaea HOM05D000161 ORTHO05D009031 6.9e-85 319.7 286 60.5
arahy.Tifrunner.gnm1.ann1.FVA5UA Arachis hypogaea HOM05D000161 ORTHO05D009031 5.3e-77 293.5 226 65.0
arahy.Tifrunner.gnm1.ann1.59Y12W Arachis hypogaea HOM05D000161 ORTHO05D007114 6.2e-70 270.0 259 56.4
EL10Ac6g14352 Beta vulgaris HOM05D000161 ORTHO05D009031 5.7e-55 220.3 146 71.2
EL10Ac7g17602 Beta vulgaris HOM05D000161 ORTHO05D039009 2.2e-43 181.8 120 70.8
arahy.Tifrunner.gnm1.ann1.NYYR6I Arachis hypogaea HOM05D000161 ORTHO05D038839 8.0e-41 173.3 136 60.3
HPP92_011833 Vanilla planifolia HOM05D000161 ORTHO05D036718 1.1e-39 169.5 140 60.0
SEGI_26615 Sequoiadendron giganteum HOM05D000161 ORTHO05D009031 1.3e-38 166.0 125 61.6
Lsat_1_v5_gn_2_56220 Lactuca sativa HOM05D000161 ORTHO05D229717 4.5e-28 131.0 94 63.8
SEGI_06948 Sequoiadendron giganteum HOM05D000161 ORTHO05D038839 3.4e-23 114.8 107 47.7
arahy.Tifrunner.gnm1.ann1.A1CTBX Arachis hypogaea HOM05D000161 ORTHO05D083724 4.4e-23 114.4 157 43.9
Lj1A206G50 Lonicera japonica HOM05D000161 ORTHO05D235408 7.7e-20 103.6 110 52.7
EL10Ac9g20878 Beta vulgaris HOM05D008595 ORTHO05D010945 5.2e-16 90.9 60 71.7
SEGI_02592 Sequoiadendron giganteum HOM05D000161 ORTHO05D039009 5.4e-13 80.9 56 69.6
Medtr3g438040 Medicago truncatula HOM05D000161 ORTHO05D036718 7.0e-13 80.5 42 81.0
arahy.Tifrunner.gnm1.ann1.0H5KQ4 Arachis hypogaea HOM05D000161 ORTHO05D009031 2.3e-11 75.5 46 73.9
A03p30570 Brassica napus HOM05D000161 ORTHO05D041164 4.4e-07 61.2 41 70.7
Medtr5g010890 Medicago truncatula HOM05D000161 ORTHO05D036718 3.7e-06 58.2 43 65.1
BraA03t12237Z Brassica rapa HOM05D000161 ORTHO05D041164 6.4e-06 57.4 69 47.8
TWI23G1065 Tripterygium wilfordii HOM05D000161 ORTHO05D414009 8.3e-06 57.0 92 44.6


User provided reference genes

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