Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21498 Utricularia gibba HOM05D000966 ORTHO05D004359 2.3e-218 761.9 377 100.0
unitig_0.g2115 Utricularia gibba HOM05D000966 ORTHO05D004359 6.1e-70 268.9 385 44.2
MSTRG.1411 Avicennia marina HOM05D000966 ORTHO05D004359 2.0e-33 147.5 248 38.3
SalBow7G0355 Salvia bowleyana HOM05D000966 ORTHO05D004359 6.2e-30 136.0 228 39.5
SalBow7G2771 Salvia bowleyana HOM05D000966 ORTHO05D004359 6.2e-30 136.0 228 39.5
Migut.N03259 Erythranthe guttata HOM05D000966 ORTHO05D004359 4.0e-29 133.3 208 40.4
Oeu015303.1 Olea europaea HOM05D000966 ORTHO05D004359 2.5e-23 114.0 206 35.9
Haze_17638 Corylus avellana HOM05D000966 ORTHO05D004359 4.0e-21 106.7 212 34.9
Dinv14693 Davidia involucrata HOM05D000966 ORTHO05D004359 1.2e-20 105.1 225 31.6
SGA_v2.0_scaffold28G11969 Striga asiatica HOM05D000966 ORTHO05D004359 1.2e-20 105.1 199 37.7
MBI03_g13487_MAGBIO Magnolia biondii HOM05D000966 ORTHO05D004359 2.0e-20 104.4 212 34.0
Oeu040397.2 Olea europaea HOM05D000966 ORTHO05D004359 3.5e-17 93.6 197 35.5
SGA_v2.0_scaffold25G11140 Striga asiatica HOM05D000966 ORTHO05D004359 4.6e-17 93.2 181 36.5
DCAR_014368 Daucus carota HOM05D000966 ORTHO05D004359 7.8e-17 92.4 242 32.6
Oeu040396.1 Olea europaea HOM05D000966 ORTHO05D004359 7.8e-17 92.4 196 34.7
QL09p032370 Quercus lobata HOM05D000966 ORTHO05D004359 7.8e-17 92.4 216 32.9
Gohir.D05G240000 Gossypium hirsutum HOM05D000966 ORTHO05D004359 1.0e-16 92.0 186 35.5
Gorai.009G248900 Gossypium raimondii HOM05D000966 ORTHO05D004359 1.0e-16 92.0 186 35.5
DCAR_016659 Daucus carota HOM05D000966 ORTHO05D004359 2.3e-16 90.9 200 33.5
Aa31LG4G7310 Aethionema arabicum HOM05D000966 ORTHO05D004359 3.0e-16 90.5 200 32.0
TAR381G1211 Trochodendron aralioides HOM05D000966 ORTHO05D004359 6.6e-16 89.4 225 32.4
Sc26g0002860 Simmondsia chinensis HOM05D000966 ORTHO05D004359 8.6e-16 89.0 219 30.6
FAN20G2668 Fragaria x ananassa HOM05D000966 ORTHO05D004359 1.9e-15 87.8 192 32.3
Potri.002G079100 Populus trichocarpa HOM05D000966 ORTHO05D004359 4.3e-15 86.7 228 33.8
Cfa018425 Carpinus fangiana HOM05D000966 ORTHO05D004359 7.3e-15 85.9 216 30.6
FvH4_2g27880 Fragaria vesca HOM05D000966 ORTHO05D004359 7.3e-15 85.9 192 32.3
FAN15G1688 Fragaria x ananassa HOM05D000966 ORTHO05D004359 7.3e-15 85.9 199 32.7
FAN24G3136 Fragaria x ananassa HOM05D000966 ORTHO05D004359 7.3e-15 85.9 192 32.3
Potri.005G182100 Populus trichocarpa HOM05D000966 ORTHO05D004359 7.3e-15 85.9 223 31.8
CiPaw.16G022600 Carya illinoinensis HOM05D000966 ORTHO05D004359 9.5e-15 85.5 208 32.2
CAN.G531.16 Capsicum annuum HOM05D000966 ORTHO05D004359 1.2e-14 85.1 205 32.7
CiPaw.15G031200 Carya illinoinensis HOM05D000966 ORTHO05D004359 1.2e-14 85.1 193 32.6
Eucgr.F03851 Eucalyptus grandis HOM05D000966 ORTHO05D004359 1.2e-14 85.1 197 31.5
Peaxi162Scf00591g00715 Petunia axillaris HOM05D000966 ORTHO05D004359 2.1e-14 84.3 193 33.2
FAN27G3367 Fragaria x ananassa HOM05D000966 ORTHO05D004359 2.8e-14 84.0 192 31.2
Manes.18G082550 Manihot esculenta HOM05D000966 ORTHO05D004359 2.8e-14 84.0 204 32.4
Nn1g08953 Nelumbo nucifera HOM05D000966 ORTHO05D004359 8.1e-14 82.4 196 32.1
Sopen06g020060 Solanum pennellii HOM05D000966 ORTHO05D004359 8.1e-14 82.4 196 32.7
SalBow2G0813 Salvia bowleyana HOM05D000966 ORTHO05D004359 1.1e-13 82.0 105 41.9
Actinidia21275 Actinidia chinensis HOM05D000966 ORTHO05D004359 1.4e-13 81.6 198 32.8
Sed0004584 Sechium edule HOM05D000966 ORTHO05D004359 1.8e-13 81.3 198 30.8
Actinidia15211 Actinidia chinensis HOM05D000966 ORTHO05D004359 2.3e-13 80.9 198 32.3
Hund26773 Selenicereus undatus HOM05D000966 ORTHO05D004359 2.3e-13 80.9 223 30.0
TAR625G0972 Trochodendron aralioides HOM05D000966 ORTHO05D004359 2.3e-13 80.9 212 32.1
RcHm_v2.0_Chr6g0296741 Rosa chinensis HOM05D000966 ORTHO05D004359 3.1e-13 80.5 193 33.2
Duzib041G0231 Durio zibethinus HOM05D000966 ORTHO05D004359 5.2e-13 79.7 289 26.3
Sabra05G0138100 Salix brachista HOM05D000966 ORTHO05D004359 6.8e-13 79.3 200 31.5
ClCG08G006030 Citrullus lanatus HOM05D000966 ORTHO05D004359 8.9e-13 79.0 198 29.8
Sp5g32470 Schrenkiella parvula HOM05D000966 ORTHO05D004359 8.9e-13 79.0 202 30.2
Atru.chr13.1574 Acer truncatum HOM05D000966 ORTHO05D004359 1.5e-12 78.2 201 30.8
Phvul.009G130100 Phaseolus vulgaris HOM05D000966 ORTHO05D004359 1.5e-12 78.2 208 29.3
Aqoxy5G02416 Aquilegia oxysepala HOM05D000966 ORTHO05D004359 2.0e-12 77.8 210 31.0
Solyc06g059960.4 Solanum lycopersicum HOM05D000966 ORTHO05D004359 2.0e-12 77.8 222 29.3
arahy.Tifrunner.gnm1.ann1.P7B6WW Arachis hypogaea HOM05D000966 ORTHO05D004359 2.6e-12 77.4 199 29.1
arahy.Tifrunner.gnm1.ann1.Z22D2G Arachis hypogaea HOM05D000966 ORTHO05D004359 2.6e-12 77.4 199 30.2
PGR042G2231 Punica granatum HOM05D000966 ORTHO05D004359 2.6e-12 77.4 215 31.2
Cpa.g.sc26.315 Carica papaya HOM05D000966 ORTHO05D004359 3.4e-12 77.0 197 31.5
THA.LOC104810214 Tarenaya hassleriana HOM05D000966 ORTHO05D004359 3.4e-12 77.0 194 30.9
COL.COLO4_35487 Corchorus olitorius HOM05D000966 ORTHO05D004359 1.3e-11 75.1 104 38.5
Peaxi162Scf00066g00223 Petunia axillaris HOM05D000966 ORTHO05D004359 1.3e-11 75.1 211 27.5
CSS0042459 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D004359 1.7e-11 74.7 93 39.8
Lalb_Chr23g0271181 Lupinus albus HOM05D000966 ORTHO05D004359 1.7e-11 74.7 204 27.5
Nitab4.5_0000418g0030 Nicotiana tabacum HOM05D000966 ORTHO05D004359 1.7e-11 74.7 223 27.4
THA.LOC104812082 Tarenaya hassleriana HOM05D000966 ORTHO05D004359 1.7e-11 74.7 210 28.1
Carub.0002s2418 Capsella rubella HOM05D000966 ORTHO05D004359 2.2e-11 74.3 189 29.6
MD08G1159600 Malus domestica HOM05D000966 ORTHO05D004359 2.2e-11 74.3 199 29.6
Lalb_Chr11g0066181 Lupinus albus HOM05D000966 ORTHO05D004359 2.9e-11 73.9 214 30.4
AUR62007714 Chenopodium quinoa HOM05D000966 ORTHO05D004359 3.8e-11 73.6 202 29.7
Thhalv10017998m.g Eutrema salsugineum HOM05D000966 ORTHO05D004359 3.8e-11 73.6 301 26.9
Manes.02G168600 Manihot esculenta HOM05D000966 ORTHO05D004359 3.8e-11 73.6 282 30.5
Sed0009206 Sechium edule HOM05D000966 ORTHO05D004359 3.8e-11 73.6 198 29.8
AUR62013429 Chenopodium quinoa HOM05D000966 ORTHO05D004359 6.4e-11 72.8 215 28.8
COL.COLO4_36773 Corchorus olitorius HOM05D000966 ORTHO05D004359 6.4e-11 72.8 283 26.9
AL2G37500 Arabidopsis lyrata HOM05D000966 ORTHO05D004359 8.4e-11 72.4 184 30.4
EL10Ac1g01359 Beta vulgaris HOM05D000966 ORTHO05D004359 8.4e-11 72.4 203 28.1
Ciclev10000005m.g Citrus clementina HOM05D000966 ORTHO05D004359 8.4e-11 72.4 229 28.4
CsaV3_6G034050 Cucumis sativus L. HOM05D000966 ORTHO05D004359 8.4e-11 72.4 193 30.1
VMungo1309G2033 Vigna mungo HOM05D000966 ORTHO05D004359 8.4e-11 72.4 200 29.0
Lalb_Chr08g0241051 Lupinus albus HOM05D000966 ORTHO05D004359 1.4e-10 71.6 210 29.0
Nn5g28439 Nelumbo nucifera HOM05D000966 ORTHO05D004359 1.9e-10 71.2 239 28.5
GSVIVG01008805001 Vitis vinifera HOM05D000966 ORTHO05D004359 1.9e-10 71.2 251 26.7
AT1G77300 Arabidopsis thaliana HOM05D000966 ORTHO05D004359 2.4e-10 70.9 189 28.0
TWI32G0333 Tripterygium wilfordii HOM05D000966 ORTHO05D004359 2.4e-10 70.9 220 30.0
MELO3C008475.2 Cucumis melo HOM05D000966 ORTHO05D004359 3.2e-10 70.5 193 29.5
A07p42840 Brassica napus HOM05D000966 ORTHO05D004359 4.1e-10 70.1 277 28.5
BraA07t31805Z Brassica rapa HOM05D000966 ORTHO05D004359 9.2e-10 68.9 273 28.9
ECA246G3937 Erigeron canadensis HOM05D000966 ORTHO05D004359 1.6e-09 68.2 110 35.5
Glyma.04G245400 Glycine max HOM05D000966 ORTHO05D004359 2.1e-09 67.8 198 31.3
Lj1g0026196 Lotus japonicus HOM05D000966 ORTHO05D004359 2.1e-09 67.8 290 25.9
C06p51460 Brassica napus HOM05D000966 ORTHO05D004359 2.7e-09 67.4 279 27.6
Glyma.06G117700 Glycine max HOM05D000966 ORTHO05D004359 2.7e-09 67.4 196 28.1
Nitab4.5_0005166g0010 Nicotiana tabacum HOM05D000966 ORTHO05D004359 2.7e-09 67.4 200 30.5
PGSC0003DMG402025314 Solanum tuberosum HOM05D000966 ORTHO05D004359 2.7e-09 67.4 117 35.9
Thecc.08G133300 Theobroma cacao HOM05D000966 ORTHO05D004359 2.7e-09 67.4 289 26.3
HanXRQChr05g0149781 Helianthus annuus HOM05D000966 ORTHO05D004359 3.5e-09 67.0 208 28.8
Ca_16610_v3 Cicer arietinum L. HOM05D000966 ORTHO05D004359 4.6e-09 66.6 196 28.1
CARHR070780 Cardamine hirsuta HOM05D000966 ORTHO05D004359 6.0e-09 66.2 229 28.4
TWI34G1216 Tripterygium wilfordii HOM05D000966 ORTHO05D004359 6.0e-09 66.2 219 29.2
Cc10_g13740 Coffea canephora HOM05D000966 ORTHO05D004359 7.8e-09 65.9 241 25.7
Solyc04g057880.3 Solanum lycopersicum HOM05D000966 ORTHO05D004359 7.8e-09 65.9 140 32.9
BcaB05g25036 Brassica carinata HOM05D000966 ORTHO05D004359 1.0e-08 65.5 180 28.9
BolC6t40164H Brassica oleracea HOM05D000966 ORTHO05D004359 1.0e-08 65.5 279 26.9
Sopen04g025730 Solanum pennellii HOM05D000966 ORTHO05D004359 1.7e-08 64.7 116 34.5
TPR.G21850 Trifolium pratense HOM05D000966 ORTHO05D004359 3.0e-08 63.9 208 27.9
Duzib093G1496 Durio zibethinus HOM05D000966 ORTHO05D004359 6.6e-08 62.8 284 24.3
Lj7P351T22 Lonicera japonica HOM05D000966 ORTHO05D004359 8.6e-08 62.4 217 30.0
Nitab4.5_0000317g0220 Nicotiana tabacum HOM05D000966 ORTHO05D004359 1.1e-07 62.0 227 28.2
SHI09224 Sapria himalayana HOM05D000966 ORTHO05D004359 1.5e-07 61.6 93 37.6
Gohir.A02G070700 Gossypium hirsutum HOM05D000966 ORTHO05D004359 1.9e-07 61.2 186 28.0
Gorai.005G087500 Gossypium raimondii HOM05D000966 ORTHO05D004359 3.3e-07 60.5 186 28.0
CANSAT25G2222 Cannabis sativa HOM05D000966 ORTHO05D004359 4.3e-07 60.1 225 27.1
Lsat_1_v5_gn_6_110300 Lactuca sativa HOM05D000966 ORTHO05D004359 4.3e-07 60.1 96 32.3
Medtr3g088625 Medicago truncatula HOM05D000966 ORTHO05D004359 5.6e-07 59.7 230 26.1
Nitab4.5_0003978g0030 Nicotiana tabacum HOM05D000966 ORTHO05D004359 5.6e-07 59.7 219 28.8
Gohir.D02G077900 Gossypium hirsutum HOM05D000966 ORTHO05D004359 1.2e-06 58.5 182 27.5
MD15G1133700 Malus domestica HOM05D000966 ORTHO05D004359 2.1e-06 57.8 200 29.0
CANSAT80G2061 Cannabis sativa HOM05D000966 ORTHO05D004359 6.2e-06 56.2 130 33.8


User provided reference genes

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