Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_746.g26630 Utricularia gibba HOM05D006328 ORTHO05D007721 1.6e-143 512.7 250 100.0
MSTRG.18860 Avicennia marina HOM05D006328 ORTHO05D007721 1.3e-92 343.6 242 71.1
SGA_v2.0_scaffold6G03437 Striga asiatica HOM05D006328 ORTHO05D007721 4.9e-92 341.7 217 77.0
SalBow6G6014 Salvia bowleyana HOM05D006328 ORTHO05D007721 1.4e-91 340.1 253 67.6
Migut.D02532 Erythranthe guttata HOM05D006328 ORTHO05D007721 1.2e-90 337.0 240 70.4
Nitab4.5_0000775g0140 Nicotiana tabacum HOM05D006328 ORTHO05D007721 1.8e-86 323.2 217 74.7
Sopen01g002030 Solanum pennellii HOM05D006328 ORTHO05D007721 4.0e-86 322.0 217 73.7
PGSC0003DMG400032183 Solanum tuberosum HOM05D006328 ORTHO05D007721 4.0e-86 322.0 217 73.7
Solyc01g006020.4 Solanum lycopersicum HOM05D006328 ORTHO05D007721 1.2e-85 320.5 217 73.7
Nitab4.5_0011368g0030 Nicotiana tabacum HOM05D006328 ORTHO05D007721 1.5e-85 320.1 217 74.2
Hma1.2p1_0062F.1_g034170 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 1.3e-84 317.0 181 85.1
Oeu029372.1 Olea europaea HOM05D006328 ORTHO05D007721 1.7e-84 316.6 252 68.3
Actinidia16265 Actinidia chinensis HOM05D006328 ORTHO05D007721 6.4e-84 314.7 245 67.8
Dinv13426 Davidia involucrata HOM05D006328 ORTHO05D007721 6.4e-84 314.7 231 72.3
Peaxi162Scf00100g00716 Petunia axillaris HOM05D006328 ORTHO05D007721 6.4e-84 314.7 219 75.3
CAN.G158.4 Capsicum annuum HOM05D006328 ORTHO05D007721 9.3e-83 310.8 225 70.2
Eucgr.B03625 Eucalyptus grandis HOM05D006328 ORTHO05D007721 9.3e-83 310.8 220 73.2
Cc01_g01550 Coffea canephora HOM05D006328 ORTHO05D007721 1.7e-81 306.6 243 65.0
ECA238G4721 Erigeron canadensis HOM05D006328 ORTHO05D007721 3.0e-81 305.8 224 69.6
THA.LOC104811061 Tarenaya hassleriana HOM05D006328 ORTHO05D007721 8.7e-81 304.3 240 66.2
HanXRQChr07g0196761 Helianthus annuus HOM05D006328 ORTHO05D007721 1.1e-80 303.9 226 70.8
CSS0031266 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 1.9e-80 303.1 181 79.6
QL01p007982 Quercus lobata HOM05D006328 ORTHO05D007721 1.9e-80 303.1 253 65.2
TAR633G0950 Trochodendron aralioides HOM05D006328 ORTHO05D007721 1.9e-80 303.1 203 73.9
TAR633G1956 Trochodendron aralioides HOM05D006328 ORTHO05D007721 1.9e-80 303.1 203 73.9
CiPaw.13G173100 Carya illinoinensis HOM05D006328 ORTHO05D007721 3.3e-80 302.4 252 64.3
Lj1A460T3 Lonicera japonica HOM05D006328 ORTHO05D007721 3.3e-80 302.4 231 67.1
Ciclev10016391m.g Citrus clementina HOM05D006328 ORTHO05D007721 2.8e-79 299.3 188 77.7
Lsat_1_v5_gn_2_101560 Lactuca sativa HOM05D006328 ORTHO05D007721 2.8e-79 299.3 186 78.0
COL.COLO4_34990 Corchorus olitorius HOM05D001240 ORTHO05D002450 8.1e-79 297.7 185 79.5
GSVIVG01025405001 Vitis vinifera HOM05D006328 ORTHO05D007721 2.4e-78 296.2 189 77.2
Carub.0003s3500 Capsella rubella HOM05D006328 ORTHO05D007721 3.1e-78 295.8 184 76.1
PGR102G1639 Punica granatum HOM05D006328 ORTHO05D007721 3.1e-78 295.8 261 62.5
MELO3C015648.2 Cucumis melo HOM05D006328 ORTHO05D007721 4.0e-78 295.4 212 71.7
Manes.03G088400 Manihot esculenta HOM05D006328 ORTHO05D007721 6.9e-78 294.7 254 62.2
ClCG03G013990 Citrullus lanatus HOM05D006328 ORTHO05D007721 1.2e-77 293.9 193 76.7
ClCG08G005770 Citrullus lanatus HOM05D006328 ORTHO05D007721 1.2e-77 293.9 254 64.2
Thhalv10004835m.g Eutrema salsugineum HOM05D006328 ORTHO05D007721 1.2e-77 293.9 185 76.2
Gohir.D13G217500 Gossypium hirsutum HOM05D006328 ORTHO05D007721 1.2e-77 293.9 218 69.3
Gorai.013G248000 Gossypium raimondii HOM05D006328 ORTHO05D007721 1.5e-77 293.5 218 69.3
AL5G20530 Arabidopsis lyrata HOM05D006328 ORTHO05D007721 2.0e-77 293.1 187 74.9
CsaV3_1G042230 Cucumis sativus L. HOM05D006328 ORTHO05D007721 2.0e-77 293.1 256 64.5
RcHm_v2.0_Chr5g0081531 Rosa chinensis HOM05D006328 ORTHO05D007721 2.0e-77 293.1 194 76.3
FvH4_3g44830 Fragaria vesca HOM05D006328 ORTHO05D007721 2.6e-77 292.7 194 76.8
FAN11G1794 Fragaria x ananassa HOM05D006328 ORTHO05D007721 2.6e-77 292.7 194 76.8
FAN16G1952 Fragaria x ananassa HOM05D006328 ORTHO05D007721 2.6e-77 292.7 196 76.0
C07p38710 Brassica napus HOM05D006328 ORTHO05D007721 4.5e-77 292.0 191 75.4
Cpa.g.sc119.81 Carica papaya HOM05D006328 ORTHO05D007721 4.5e-77 292.0 187 75.4
Glyma.08G315600 Glycine max HOM05D006328 ORTHO05D007721 4.5e-77 292.0 196 76.0
AT3G32930 Arabidopsis thaliana HOM05D006328 ORTHO05D007721 5.8e-77 291.6 188 73.4
A06p39560 Brassica napus HOM05D006328 ORTHO05D007721 5.8e-77 291.6 191 74.3
BraA06t26871Z Brassica rapa HOM05D006328 ORTHO05D007721 5.8e-77 291.6 191 74.3
FAN25G2838 Fragaria x ananassa HOM05D006328 ORTHO05D007721 5.8e-77 291.6 252 63.5
Sp2g18300 Schrenkiella parvula HOM05D006328 ORTHO05D007721 5.8e-77 291.6 186 75.8
Aa31LG4G12590 Aethionema arabicum HOM05D006328 ORTHO05D007721 9.9e-77 290.8 179 75.4
BcaB04g19533 Brassica carinata HOM05D006328 ORTHO05D007721 9.9e-77 290.8 187 74.9
Gohir.A13G213700 Gossypium hirsutum HOM05D006328 ORTHO05D007721 9.9e-77 290.8 218 68.8
Thecc.09G213100 Theobroma cacao HOM05D006328 ORTHO05D007721 9.9e-77 290.8 225 67.6
BraA09t36060Z Brassica rapa HOM05D006328 ORTHO05D007721 1.7e-76 290.0 189 74.1
TWI60G0846 Tripterygium wilfordii HOM05D006328 ORTHO05D007721 1.7e-76 290.0 249 63.1
BcaC04g23807 Brassica carinata HOM05D006328 ORTHO05D007721 2.2e-76 289.7 186 74.7
C09p04470 Brassica napus HOM05D006328 ORTHO05D007721 2.2e-76 289.7 186 74.7
BolC9t53377H Brassica oleracea HOM05D006328 ORTHO05D007721 2.2e-76 289.7 186 74.7
PSO339G5084 Papaver somniferum HOM05D006328 ORTHO05D007721 2.2e-76 289.7 239 64.0
EL10Ac4g10350 Beta vulgaris HOM05D006328 ORTHO05D007721 2.9e-76 289.3 188 74.5
CARHR153570 Cardamine hirsuta HOM05D006328 ORTHO05D007721 2.9e-76 289.3 240 62.1
FAN21G0799 Fragaria x ananassa HOM05D006328 ORTHO05D007721 3.8e-76 288.9 266 61.7
MD08G1205200 Malus domestica HOM05D006328 ORTHO05D007721 3.8e-76 288.9 188 75.5
A09p04230 Brassica napus HOM05D006328 ORTHO05D007721 4.9e-76 288.5 187 74.3
Potri.003G216700 Populus trichocarpa HOM05D006328 ORTHO05D007721 4.9e-76 288.5 254 61.8
Nn7g35935 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.4e-75 287.0 246 63.4
Sed0015335 Sechium edule HOM05D006328 ORTHO05D007721 1.4e-75 287.0 267 61.8
Hund07572 Selenicereus undatus HOM05D006328 ORTHO05D007721 1.4e-75 287.0 256 60.9
Glyma.18G097300 Glycine max HOM05D006328 ORTHO05D007721 2.4e-75 286.2 195 75.4
MBI13_g29633_MAGBIO Magnolia biondii HOM05D006328 ORTHO05D007721 2.4e-75 286.2 183 75.4
Phvul.006G042800 Phaseolus vulgaris HOM05D006328 ORTHO05D007721 3.2e-75 285.8 205 71.7
Prupe.1G537200 Prunus persica HOM05D006328 ORTHO05D007721 3.2e-75 285.8 191 75.4
Atru.chr3.2259 Acer truncatum HOM05D006328 ORTHO05D007721 4.2e-75 285.4 192 74.0
Atru.chr3.2265 Acer truncatum HOM05D006328 ORTHO05D007721 4.2e-75 285.4 192 74.0
Actinidia06854 Actinidia chinensis HOM05D001240 ORTHO05D002450 4.2e-75 285.4 167 81.4
arahy.Tifrunner.gnm1.ann1.6HD85A Arachis hypogaea HOM05D006328 ORTHO05D007721 7.1e-75 284.6 224 68.3
ATR0598G038 Amborella trichopoda HOM05D006328 ORTHO05D007721 2.1e-74 283.1 217 67.3
CANSAT11G2432 Cannabis sativa HOM05D006328 ORTHO05D007721 3.5e-74 282.3 193 73.6
PSO384G1580 Papaver somniferum HOM05D006328 ORTHO05D007721 3.5e-74 282.3 239 62.8
TPR.G19330 Trifolium pratense HOM05D006328 ORTHO05D007721 3.5e-74 282.3 233 64.8
Lj6g0000665 Lotus japonicus HOM05D006328 ORTHO05D007721 4.6e-74 282.0 187 77.0
AUR62019196 Chenopodium quinoa HOM05D006328 ORTHO05D007721 1.0e-73 280.8 199 70.9
DCAR_001992 Daucus carota HOM05D006328 ORTHO05D007721 3.9e-73 278.9 187 74.3
Lalb_Chr10g0091951 Lupinus albus HOM05D006328 ORTHO05D007721 8.7e-73 277.7 241 63.1
Haze_22985 Corylus avellana HOM05D006328 ORTHO05D007721 1.9e-72 276.6 313 53.0
Rhsim13G0229700 Rhododendron simsii HOM05D006328 ORTHO05D007721 5.6e-72 275.0 285 55.1
HPP92_009650 Vanilla planifolia HOM05D006328 ORTHO05D007721 7.4e-72 274.6 180 72.8
CDE06G2606 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 2.8e-71 272.7 180 73.3
Medtr3g083310 Medicago truncatula HOM05D006328 ORTHO05D007721 3.6e-71 272.3 235 62.1
Sabra03G0161800 Salix brachista HOM05D006328 ORTHO05D007721 3.6e-71 272.3 214 66.4
Aqoxy1G00065 Aquilegia oxysepala HOM05D006328 ORTHO05D007721 9.0e-70 267.7 238 60.9
Manes.15G105600 Manihot esculenta HOM05D006328 ORTHO05D007721 2.0e-69 266.5 172 77.9
Duzib150G1371 Durio zibethinus HOM05D006328 ORTHO05D007721 7.6e-69 264.6 247 60.3
AUR62000025 Chenopodium quinoa HOM05D006328 ORTHO05D007721 8.4e-68 261.2 174 74.1
Ah.06g193050 Amaranthus hybridus HOM05D001193 ORTHO05D007721 2.7e-66 256.1 287 49.1
vmacro04215 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 2.3e-65 253.1 181 70.7
Hma1.2p1_0062F.1_g034180 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 1.3e-63 247.3 139 87.1
Os07g0608100 Oryza sativa ssp. japonica HOM05D006328 ORTHO05D007721 3.8e-60 235.7 192 63.0
Zm00001eb108920 Zea mays HOM05D006328 ORTHO05D007721 9.3e-59 231.1 182 64.3
VMungo0540G0449 Vigna mungo HOM05D006328 ORTHO05D007721 4.5e-53 212.2 123 83.7
Psat5g101200 Pisum sativum HOM05D006328 ORTHO05D007721 2.7e-50 203.0 194 57.2
AagrBONN_evm.TU.Sc2ySwM_344.1649 Anthoceros agrestis HOM05D006328 ORTHO05D007721 2.3e-49 199.9 194 54.1
Mapoly0048s0070 Marchantia polymorpha HOM05D006328 ORTHO05D007721 1.4e-46 190.7 186 53.2
Pp3c11_23310 Physcomitrium patens HOM05D006328 ORTHO05D007721 5.5e-43 178.7 178 51.1
vmacro22566 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 9.4e-43 177.9 106 81.1
Sc06g0004300 Simmondsia chinensis HOM05D006328 ORTHO05D007721 2.6e-40 169.9 138 64.5
CDE07G1106 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 2.9e-36 156.4 173 48.6
CBR_g50072 Chara braunii HOM05D006328 ORTHO05D007721 1.9e-35 153.7 127 55.9
CSS0049555 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 1.5e-32 144.1 105 69.5
CSS0028438 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 1.7e-31 140.6 102 70.6
Nn2g15765 Nelumbo nucifera HOM05D006328 ORTHO05D007721 3.8e-28 129.4 72 84.7
Duzib168G1709 Durio zibethinus HOM05D006328 ORTHO05D007721 1.1e-27 127.9 180 42.2
unitig_899.g15354 Utricularia gibba HOM05D006328 ORTHO05D007721 5.2e-25 119.0 188 42.6
HanXRQChr04g0113321 Helianthus annuus HOM05D006328 ORTHO05D007721 4.8e-23 112.5 62 82.3
Dinv15017 Davidia involucrata HOM05D006328 ORTHO05D007721 2.5e-19 100.1 122 50.8
Nn2g15764 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.2e-18 97.8 80 67.5
HanXRQChr17g0560491 Helianthus annuus HOM05D006328 ORTHO05D007721 5.2e-17 92.4 57 77.2
VMungo0540G1370 Vigna mungo HOM05D006328 ORTHO05D007721 2.4e-14 83.6 76 57.9
arahy.Tifrunner.gnm1.ann1.VB18ZC Arachis hypogaea HOM05D006328 ORTHO05D007721 1.2e-13 81.3 100 51.0
arahy.Tifrunner.gnm1.ann1.C5G03I Arachis hypogaea HOM05D006328 ORTHO05D007721 6.5e-12 75.5 61 68.9
Dinv08842 Davidia involucrata HOM05D006328 ORTHO05D007721 3.2e-11 73.2 44 79.5
Hma1.2p1_0062F.1_g034160 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 5.5e-11 72.4 107 43.0
Zm00001eb327220 Zea mays HOM05D006328 ORTHO05D007721 1.0e-09 68.2 106 41.5
Sabra06G0010000 Salix brachista HOM05D006328 ORTHO05D007721 1.8e-09 67.4 63 54.0
arahy.Tifrunner.gnm1.ann1.RQ0K0U Arachis hypogaea HOM05D002734 ORTHO05D003035 7.0e-06 55.5 35 74.3


User provided reference genes

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