Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_744.g23973 Utricularia gibba HOM05D000492 ORTHO05D005571 6.0e-35 150.2 72 100.0
Lj2P454T47 Lonicera japonica HOM05D000492 ORTHO05D005571 9.4e-12 73.2 60 51.7
Ah.02g125090 Amaranthus hybridus HOM05D000492 ORTHO05D005571 1.2e-11 72.8 60 50.0
AUR62004069 Chenopodium quinoa HOM05D000492 ORTHO05D005571 1.6e-11 72.4 60 51.7
AUR62007582 Chenopodium quinoa HOM05D000492 ORTHO05D005571 1.6e-11 72.4 60 51.7
Dinv13510 Davidia involucrata HOM05D000492 ORTHO05D005571 3.6e-11 71.2 61 52.5
Duzib187G0814 Durio zibethinus HOM05D000492 ORTHO05D005571 7.9e-11 70.1 60 53.3
Migut.H00963 Erythranthe guttata HOM05D000492 ORTHO05D005571 7.9e-11 70.1 60 51.7
Rhsim13G0206600 Rhododendron simsii HOM05D000492 ORTHO05D005571 7.9e-11 70.1 60 50.0
Atru.chr3.606 Acer truncatum HOM05D000492 ORTHO05D005571 1.4e-10 69.3 60 51.7
Sc03g0003080 Simmondsia chinensis HOM05D000492 ORTHO05D005571 1.4e-10 69.3 60 46.7
Ciclev10027293m.g Citrus clementina HOM05D000492 ORTHO05D005571 3.0e-10 68.2 60 50.0
Sopen02g029780 Solanum pennellii HOM05D000492 ORTHO05D005571 3.9e-10 67.8 58 50.0
PGSC0003DMG400003603 Solanum tuberosum HOM05D000492 ORTHO05D005571 3.9e-10 67.8 58 50.0
Phvul.002G032100 Phaseolus vulgaris HOM05D000492 ORTHO05D005571 5.1e-10 67.4 60 51.7
Solyc02g085090.1 Solanum lycopersicum HOM05D000492 ORTHO05D005571 5.1e-10 67.4 58 50.0
VMungo1215G1439 Vigna mungo HOM05D000492 ORTHO05D005571 5.1e-10 67.4 60 50.0
CSS0044522 Camellia sinensis var. sinensis HOM05D000492 ORTHO05D005571 6.7e-10 67.0 60 50.0
DCAR_025951 Daucus carota HOM05D000492 ORTHO05D005571 8.8e-10 66.6 61 54.1
TWI09G0127 Tripterygium wilfordii HOM05D000492 ORTHO05D005571 8.8e-10 66.6 60 51.7
Hma1.2p1_0789F.1_g218260 Hydrangea macrophylla HOM05D000492 ORTHO05D005571 1.1e-09 66.2 60 46.7
EL10Ac6g15544 Beta vulgaris HOM05D000492 ORTHO05D005571 1.5e-09 65.9 60 46.7
Nitab4.5_0000136g0300 Nicotiana tabacum HOM05D000492 ORTHO05D005571 1.5e-09 65.9 60 50.0
Nitab4.5_0014356g0010 Nicotiana tabacum HOM05D000492 ORTHO05D005571 1.5e-09 65.9 60 50.0
Thecc.01G032900 Theobroma cacao HOM05D000492 ORTHO05D005571 1.5e-09 65.9 60 48.3
CAN.G358.64 Capsicum annuum HOM05D000492 ORTHO05D005571 2.0e-09 65.5 60 46.7
CsaV3_6G046340 Cucumis sativus L. HOM05D000492 ORTHO05D005571 2.0e-09 65.5 60 46.7
Sed0008880 Sechium edule HOM05D000492 ORTHO05D005571 2.0e-09 65.5 60 50.0
GSVIVG01018937001 Vitis vinifera HOM05D000492 ORTHO05D005571 3.3e-09 64.7 60 51.7
Haze_02404 Corylus avellana HOM05D000492 ORTHO05D005571 5.7e-09 63.9 61 54.1
BcaC06g36394 Brassica carinata HOM05D000492 ORTHO05D005571 7.4e-09 63.5 61 52.5
A07p02440 Brassica napus HOM05D000492 ORTHO05D005571 7.4e-09 63.5 61 52.5
C07p04590 Brassica napus HOM05D000492 ORTHO05D005571 7.4e-09 63.5 61 52.5
BolC7t40860H Brassica oleracea HOM05D000492 ORTHO05D005571 7.4e-09 63.5 61 52.5
BraA07t28040Z Brassica rapa HOM05D000492 ORTHO05D005571 7.4e-09 63.5 61 52.5
Glyma.01G173100 Glycine max HOM05D000492 ORTHO05D005571 7.4e-09 63.5 60 45.0
Oeu035598.1 Olea europaea HOM05D000492 ORTHO05D005571 7.4e-09 63.5 60 50.0
BcaB03g16616 Brassica carinata HOM05D000492 ORTHO05D005571 1.3e-08 62.8 61 50.8
Duzib264G1087 Durio zibethinus HOM05D004708 ORTHO05D005573 1.3e-08 62.8 53 56.6
Nitab4.5_0000178g0230 Nicotiana tabacum HOM05D000492 ORTHO05D005571 1.3e-08 62.8 60 46.7
TWI73G1112 Tripterygium wilfordii HOM05D000492 ORTHO05D005571 1.3e-08 62.8 60 46.7
ClCG01G019670 Citrullus lanatus HOM05D002605 ORTHO05D005571 2.2e-08 62.0 60 45.0
Hma1.2p1_0543F.1_g175430 Hydrangea macrophylla HOM05D000492 ORTHO05D005571 2.2e-08 62.0 58 46.6
Hma1.2p1_1689F.1_g297690 Hydrangea macrophylla HOM05D000492 ORTHO05D005571 2.2e-08 62.0 60 45.0
arahy.Tifrunner.gnm1.ann1.Q9S7W6 Arachis hypogaea HOM05D000492 ORTHO05D005571 2.8e-08 61.6 60 45.0
A06p33320 Brassica napus HOM05D000492 ORTHO05D005571 2.8e-08 61.6 61 50.8
C03p59060 Brassica napus HOM05D000492 ORTHO05D005571 2.8e-08 61.6 61 50.8
BolC3t18167H Brassica oleracea HOM05D000492 ORTHO05D005571 2.8e-08 61.6 61 50.8
BraA06t26261Z Brassica rapa HOM05D000492 ORTHO05D005571 2.8e-08 61.6 61 50.8
Carub.0003s3244 Capsella rubella HOM05D000492 ORTHO05D005571 2.8e-08 61.6 66 50.0
Cc07_g09710 Coffea canephora HOM05D000492 ORTHO05D005571 2.8e-08 61.6 47 59.6
MD02G1144800 Malus domestica HOM05D000492 ORTHO05D005571 3.7e-08 61.2 60 45.0
FAN15G1478 Fragaria x ananassa HOM05D000492 ORTHO05D005571 4.8e-08 60.8 64 48.4
Glyma.11G070000 Glycine max HOM05D000492 ORTHO05D005571 4.8e-08 60.8 60 43.3
Nitab4.5_0006115g0010 Nicotiana tabacum HOM05D000492 ORTHO05D005571 4.8e-08 60.8 60 45.0
Sp3g31680 Schrenkiella parvula HOM05D000492 ORTHO05D005571 4.8e-08 60.8 66 48.5
BcaB08g34802 Brassica carinata HOM05D000492 ORTHO05D005571 6.3e-08 60.5 61 49.2
Sed0025954 Sechium edule HOM05D002605 ORTHO05D002842 6.3e-08 60.5 60 45.0
GSVIVG01026367001 Vitis vinifera HOM05D000492 ORTHO05D005571 6.3e-08 60.5 53 52.8
Cfa004985 Carpinus fangiana HOM05D000492 ORTHO05D005571 8.2e-08 60.1 61 52.5
FvH4_1g13020 Fragaria vesca HOM05D000492 ORTHO05D005571 8.2e-08 60.1 61 50.8
FAN19G2526 Fragaria x ananassa HOM05D000492 ORTHO05D005571 8.2e-08 60.1 61 50.8
FAN23G2283 Fragaria x ananassa HOM05D000492 ORTHO05D005571 8.2e-08 60.1 61 50.8
HanXRQChr16g0530631 Helianthus annuus HOM05D000492 ORTHO05D005571 8.2e-08 60.1 58 46.6
SGA_v2.0_scaffold54G19549 Striga asiatica HOM05D000492 ORTHO05D005571 8.2e-08 60.1 61 49.2
AT2G18260 Arabidopsis thaliana HOM05D000492 ORTHO05D005571 1.1e-07 59.7 66 48.5
Ca_24862_v3 Cicer arietinum L. HOM05D000492 ORTHO05D005571 1.1e-07 59.7 60 46.7
FAN28G0396 Fragaria x ananassa HOM05D000492 ORTHO05D005571 1.1e-07 59.7 61 50.8
Gohir.A11G043200 Gossypium hirsutum HOM05D000492 ORTHO05D005571 1.1e-07 59.7 53 54.7
Manes.11G086000 Manihot esculenta HOM05D000492 ORTHO05D005571 1.1e-07 59.7 48 58.3
THA.LOC104807460 Tarenaya hassleriana HOM05D000492 ORTHO05D005571 1.1e-07 59.7 62 46.8
MD15G1259000 Malus domestica HOM05D000492 ORTHO05D005571 1.4e-07 59.3 58 50.0
RcHm_v2.0_Chr6g0264961 Rosa chinensis HOM05D000492 ORTHO05D005571 1.4e-07 59.3 65 46.2
FvH4_2g09080 Fragaria vesca HOM05D000492 ORTHO05D005571 2.4e-07 58.5 65 46.2
Gohir.D11G046700 Gossypium hirsutum HOM05D000492 ORTHO05D005571 2.4e-07 58.5 58 50.0
Potri.005G121300 Populus trichocarpa HOM05D000492 ORTHO05D005571 2.4e-07 58.5 60 46.7
Lalb_Chr16g0377741 Lupinus albus HOM05D000492 ORTHO05D005571 3.1e-07 58.2 47 55.3
Sabra07G0020100 Salix brachista HOM05D000492 ORTHO05D005571 3.1e-07 58.2 46 58.7
AL3G51530 Arabidopsis lyrata HOM05D000492 ORTHO05D005571 4.1e-07 57.8 66 47.0
RcHm_v2.0_Chr2g0101181 Rosa chinensis HOM05D000492 ORTHO05D005571 4.1e-07 57.8 61 45.9
TPR.G2376 Trifolium pratense HOM05D000492 ORTHO05D005571 4.1e-07 57.8 47 53.2
Manes.01G136800 Manihot esculenta HOM05D000492 ORTHO05D005571 5.3e-07 57.4 51 51.0
Sabra09G0090300 Salix brachista HOM05D000492 ORTHO05D005571 5.3e-07 57.4 61 49.2
ECA246G0999 Erigeron canadensis HOM05D000492 ORTHO05D005571 6.9e-07 57.0 67 43.3
Potri.009G117900 Populus trichocarpa HOM05D000492 ORTHO05D005571 6.9e-07 57.0 49 53.1
Hund13989 Selenicereus undatus HOM05D000492 ORTHO05D005571 9.1e-07 56.6 47 53.2
Lj2g0024517 Lotus japonicus HOM05D000492 ORTHO05D005571 1.2e-06 56.2 47 55.3
QL06p046590 Quercus lobata HOM05D000001 ORTHO05D000003 1.2e-06 56.2 53 50.9
Potri.007G023100 Populus trichocarpa HOM05D000492 ORTHO05D005571 1.5e-06 55.8 46 56.5
Prupe.7G156800 Prunus persica HOM05D000492 ORTHO05D005571 1.5e-06 55.8 47 55.3
QL04p027997 Quercus lobata HOM05D000005 ORTHO05D000294 1.5e-06 55.8 53 52.8
QL11p044600 Quercus lobata HOM05D000492 ORTHO05D005571 1.5e-06 55.8 65 46.2
CARHR108860 Cardamine hirsuta HOM05D000492 ORTHO05D005571 2.0e-06 55.5 61 47.5
Cpa.g.sc6.136 Carica papaya HOM05D000492 ORTHO05D005571 2.0e-06 55.5 60 43.3
FAN20G1231 Fragaria x ananassa HOM05D000492 ORTHO05D005571 2.0e-06 55.5 64 45.3
Prupe.8G094700 Prunus persica HOM05D000492 ORTHO05D005571 2.0e-06 55.5 61 42.6
TAR381G0129 Trochodendron aralioides HOM05D000492 ORTHO05D005571 2.0e-06 55.5 61 44.3
Thhalv10022793m.g Eutrema salsugineum HOM05D000492 ORTHO05D005571 2.6e-06 55.1 65 47.7
CiPaw.06G134500 Carya illinoinensis HOM05D000492 ORTHO05D005571 3.4e-06 54.7 61 47.5
FAN26G1109 Fragaria x ananassa HOM05D000492 ORTHO05D005571 3.4e-06 54.7 61 49.2
Psat2g158400 Pisum sativum HOM05D000492 ORTHO05D005571 5.9e-06 53.9 47 53.2
PGR119G0121 Punica granatum HOM05D000492 ORTHO05D005571 5.9e-06 53.9 47 51.1
MD05G1064700 Malus domestica HOM05D000492 ORTHO05D005571 7.7e-06 53.5 61 45.9
Prupe.8G095300 Prunus persica HOM05D000492 ORTHO05D005571 7.7e-06 53.5 61 44.3


User provided reference genes

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