Gene: AT2G18260

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G18260
  • Transcript Identifier AT2G18260.1
  • Gene Type Coding gene
  • Location Chr2 : 7942275-7943192 : positive

Gene Family Information

  • ID HOM05D000492
  • #Genes/#Species 1080/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G18260.1
  • symbol SYP112
  • Alias ATSYP112
  • uniprot Q9ZPV9

Descriptions

  • Description syntaxin of plants 112
  • Computational description syntaxin of plants 112 (SYP112); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, response to cold, cellular membrane fusion; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 111 (TAIR:AT1G08560.1); Has 1733 Blast hits to 1731 proteins in 229 species: Archae - 0; Bacteria - 19; Metazoa - 889; Fungi - 210; Plants - 409; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IBA
TAS
Gene Ontologyintracellular protein transport1 2
GO:0015031
IEA
GOA Databaseprotein transport
GO:0009409
IEP
GOA Databaseresponse to cold
GO:0006906
IBA
Gene Ontologyvesicle fusion2
GO:0006887
IBA
Gene Ontologyexocytosis2
GO:0048278
IBA
Gene Ontologyvesicle docking2
GO:0061025
TAS
Gene Ontologymembrane fusion1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000149
IBA
Gene OntologySNARE binding2
GO:0005484
IEA
GOA DatabaseSNAP receptor activity
GO:0005484
IBA
TAS
Gene OntologySNAP receptor activity1 2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
Gene Ontologynucleus3
GO:0031201
IBA
Gene OntologySNARE complex2
GO:0005886
IBA
Gene Ontologyplasma membrane2
GO:0012505
IBA
Gene Ontologyendomembrane system2
GO:0016021
IBA
Gene Ontologyintegral component of membrane2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006011 Syntaxin, N-terminal domain
IPR000727 Target SNARE coiled-coil homology domain
IPR010989 SNARE
Mapman id Description
22.3.5.1.1.1 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qa-type SNARE components.SYP1-group component