Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19988 Utricularia gibba HOM05D000036 ORTHO05D029958 9.7e-49 196.4 95 100.0
unitig_747.g21100 Utricularia gibba HOM05D000036 ORTHO05D000441 1.2e-17 93.2 94 59.6
Migut.N00075 Erythranthe guttata HOM05D000036 ORTHO05D000441 4.1e-15 84.7 60 61.7
Migut.N00077 Erythranthe guttata HOM05D000036 ORTHO05D000441 4.1e-15 84.7 60 61.7
unitig_26.g10560 Utricularia gibba HOM05D000036 ORTHO05D000441 4.1e-15 84.7 61 67.2
unitig_749.g13386 Utricularia gibba HOM05D000036 ORTHO05D000441 4.1e-15 84.7 61 67.2
Migut.N00079 Erythranthe guttata HOM05D005204 ORTHO05D006037 5.4e-15 84.3 60 61.7
Migut.N00078 Erythranthe guttata HOM05D000036 ORTHO05D000441 7.0e-15 84.0 60 61.7
Migut.N00076 Erythranthe guttata HOM05D000036 ORTHO05D000441 1.6e-14 82.8 60 60.0
MSTRG.24803 Avicennia marina HOM05D000036 ORTHO05D000441 8.6e-13 77.0 59 57.6
MSTRG.21786 Avicennia marina HOM05D000036 ORTHO05D000441 4.2e-12 74.7 61 55.7
unitig_748.g8724 Utricularia gibba HOM05D000036 ORTHO05D000441 2.1e-11 72.4 60 56.7
SGA_v2.0_scaffold67G22592 Striga asiatica HOM05D000036 ORTHO05D000441 2.8e-11 72.0 60 55.0
Cc03_g01530 Coffea canephora HOM05D000036 ORTHO05D000441 3.6e-11 71.6 60 51.7
SGA_v2.0_scaffold18G08352 Striga asiatica HOM05D000036 ORTHO05D000441 4.7e-11 71.2 60 53.3
Migut.G00128 Erythranthe guttata HOM05D000036 ORTHO05D000441 6.1e-11 70.9 60 53.3
MSTRG.3892 Avicennia marina HOM05D000036 ORTHO05D000441 8.0e-11 70.5 59 49.2
Dinv44350 Davidia involucrata HOM05D004869 ORTHO05D005893 8.0e-11 70.5 60 53.3
SalBow5G3689 Salvia bowleyana HOM05D000036 ORTHO05D000441 2.3e-10 68.9 58 53.4
Gohir.A02G050900 Gossypium hirsutum HOM05D000036 ORTHO05D000441 4.0e-10 68.2 59 50.8
Gohir.D02G055800 Gossypium hirsutum HOM05D000036 ORTHO05D000441 8.8e-10 67.0 59 49.2
SGA_v2.0_scaffold119G32708 Striga asiatica HOM05D000036 ORTHO05D000441 2.6e-09 65.5 59 50.8
unitig_37.g12402 Utricularia gibba HOM05D000036 ORTHO05D000441 2.6e-09 65.5 60 48.3
SalBow5G1655 Salvia bowleyana HOM05D000036 ORTHO05D000441 1.3e-08 63.2 60 50.0
Oeu053999.1 Olea europaea HOM05D000036 ORTHO05D000441 1.7e-08 62.8 59 42.4
Cfa015426 Carpinus fangiana HOM05D005204 ORTHO05D006037 2.2e-08 62.4 62 48.4
vmacro08185 Vaccinium macrocarpon HOM05D000036 ORTHO05D000441 2.2e-08 62.4 60 48.3
CAN.G449.72 Capsicum annuum HOM05D000036 ORTHO05D000441 3.7e-08 61.6 61 50.8
Cc03_g01510 Coffea canephora HOM05D000036 ORTHO05D000441 3.7e-08 61.6 61 45.9
Cc03_g01520 Coffea canephora HOM05D000036 ORTHO05D000441 3.7e-08 61.6 61 45.9
Duzib212G1041 Durio zibethinus HOM05D000036 ORTHO05D000441 3.7e-08 61.6 60 45.0
MSTRG.10116 Avicennia marina HOM05D000036 ORTHO05D000441 4.9e-08 61.2 59 45.8
CAN.G14.22 Capsicum annuum HOM05D000036 ORTHO05D000441 4.9e-08 61.2 60 48.3
Duzib052G0597 Durio zibethinus HOM05D000036 ORTHO05D000441 4.9e-08 61.2 60 45.0
Nitab4.5_0000695g0120 Nicotiana tabacum HOM05D000036 ORTHO05D000441 4.9e-08 61.2 60 46.7
Nitab4.5_0008670g0010 Nicotiana tabacum HOM05D000036 ORTHO05D000441 4.9e-08 61.2 60 46.7
Oeu028322.1 Olea europaea HOM05D000036 ORTHO05D000441 4.9e-08 61.2 60 46.7
SalBow2G2819 Salvia bowleyana HOM05D000036 ORTHO05D000441 4.9e-08 61.2 61 47.5
SalBow5G2402 Salvia bowleyana HOM05D000036 ORTHO05D000441 4.9e-08 61.2 58 50.0
Sopen05g032850 Solanum pennellii HOM05D000036 ORTHO05D000441 4.9e-08 61.2 61 50.8
PGSC0003DMG400027833 Solanum tuberosum HOM05D000036 ORTHO05D000441 4.9e-08 61.2 60 48.3
SGA_v2.0_scaffold91G28028 Striga asiatica HOM05D000036 ORTHO05D000441 6.3e-08 60.8 60 45.0
Hma1.2p1_0078F.1_g040350 Hydrangea macrophylla HOM05D000036 ORTHO05D000441 8.3e-08 60.5 61 47.5
SalBow5G0580 Salvia bowleyana HOM05D000036 ORTHO05D000441 8.3e-08 60.5 58 51.7
Duzib151G0728 Durio zibethinus HOM05D000036 ORTHO05D000441 1.1e-07 60.1 60 43.3
Nitab4.5_0010155g0010 Nicotiana tabacum HOM05D000036 ORTHO05D000441 1.1e-07 60.1 59 47.5
Rhsim04G0225300 Rhododendron simsii HOM05D000036 ORTHO05D000441 1.1e-07 60.1 61 47.5
Solyc01g066360.3 Solanum lycopersicum HOM05D000036 ORTHO05D000441 1.1e-07 60.1 61 45.9
Solyc05g054360.4 Solanum lycopersicum HOM05D000036 ORTHO05D000441 1.1e-07 60.1 61 52.5
Nitab4.5_0003767g0060 Nicotiana tabacum HOM05D000036 ORTHO05D000441 1.4e-07 59.7 59 47.5
Peaxi162Scf00065g01214 Petunia axillaris HOM05D000036 ORTHO05D000441 1.4e-07 59.7 60 46.7
Sopen01g028000 Solanum pennellii HOM05D000036 ORTHO05D000441 1.4e-07 59.7 60 46.7
Thecc.04G288900 Theobroma cacao HOM05D000036 ORTHO05D000441 1.4e-07 59.7 60 45.0
CANSAT78G2165 Cannabis sativa HOM05D000036 ORTHO05D000441 1.8e-07 59.3 62 43.5
Rhsim02G0006900 Rhododendron simsii HOM05D000036 ORTHO05D000441 1.8e-07 59.3 63 47.6
Sed0007418 Sechium edule HOM05D000036 ORTHO05D000441 2.4e-07 58.9 59 47.5
COL.COLO4_13823 Corchorus olitorius HOM05D000036 ORTHO05D000441 3.1e-07 58.5 59 45.8
Cpa.g.sc50.162 Carica papaya HOM05D000036 ORTHO05D000441 4.1e-07 58.2 63 50.8
COL.COLO4_06719 Corchorus olitorius HOM05D000036 ORTHO05D000441 4.1e-07 58.2 59 44.1
Haze_01166 Corylus avellana HOM05D000036 ORTHO05D000441 4.1e-07 58.2 61 47.5
Migut.N02100 Erythranthe guttata HOM05D000036 ORTHO05D000441 5.4e-07 57.8 59 42.4
Nitab4.5_0000570g0310 Nicotiana tabacum HOM05D000036 ORTHO05D000441 5.4e-07 57.8 60 48.3
SalBow3G1810 Salvia bowleyana HOM05D000036 ORTHO05D000441 5.4e-07 57.8 59 45.8
Atru.chr4.2899 Acer truncatum HOM05D000036 ORTHO05D000441 9.2e-07 57.0 62 40.3
CDE05G2652 Ceratophyllum demersum HOM05D000036 ORTHO05D000441 9.2e-07 57.0 61 45.9
CDE11G0111 Ceratophyllum demersum HOM05D000036 ORTHO05D000441 9.2e-07 57.0 61 45.9
PGSC0003DMG400039958 Solanum tuberosum HOM05D000036 ORTHO05D000441 9.2e-07 57.0 59 47.5
Actinidia14279 Actinidia chinensis HOM05D000036 ORTHO05D000441 1.2e-06 56.6 60 43.3
Nitab4.5_0011001g0020 Nicotiana tabacum HOM05D000036 ORTHO05D000441 1.2e-06 56.6 61 47.5
Oeu043330.1 Olea europaea HOM05D000036 ORTHO05D000441 1.2e-06 56.6 64 43.8
SalBow2G1931 Salvia bowleyana HOM05D000036 ORTHO05D000441 1.6e-06 56.2 59 45.8
DCAR_000476 Daucus carota HOM05D000036 ORTHO05D000441 2.0e-06 55.8 59 40.7
Lsat_1_v5_gn_7_72920 Lactuca sativa HOM05D000036 ORTHO05D000441 2.0e-06 55.8 61 47.5
Peaxi162Scf00065g01216 Petunia axillaris HOM05D000036 ORTHO05D000441 2.0e-06 55.8 59 45.8
SalBow2G0721 Salvia bowleyana HOM05D000036 ORTHO05D000441 2.0e-06 55.8 58 44.8
Solyc01g066390.4 Solanum lycopersicum HOM05D000036 ORTHO05D000441 2.0e-06 55.8 59 45.8
Solyc01g066420.3 Solanum lycopersicum HOM05D000036 ORTHO05D000441 2.0e-06 55.8 59 45.8
Sopen01g028010 Solanum pennellii HOM05D000036 ORTHO05D000441 2.0e-06 55.8 59 45.8
Sopen01g028050 Solanum pennellii HOM05D000036 ORTHO05D000441 2.0e-06 55.8 59 45.8
Migut.B01012 Erythranthe guttata HOM05D000036 ORTHO05D000441 2.7e-06 55.5 61 44.3
FAN12G4186 Fragaria x ananassa HOM05D000036 ORTHO05D000441 2.7e-06 55.5 61 44.3
Lj1g0014098 Lotus japonicus HOM05D000036 ORTHO05D000441 2.7e-06 55.5 61 45.9
Sopen12g034080 Solanum pennellii HOM05D000036 ORTHO05D000441 2.7e-06 55.5 60 46.7
PGSC0003DMG400027840 Solanum tuberosum HOM05D000036 ORTHO05D000441 2.7e-06 55.5 59 45.8
unitig_699.g19672 Utricularia gibba HOM05D000036 ORTHO05D000441 2.7e-06 55.5 61 45.9
CiPaw.02G079800 Carya illinoinensis HOM05D000036 ORTHO05D000441 3.5e-06 55.1 61 44.3
Lj6C681T3 Lonicera japonica HOM05D000036 ORTHO05D000441 3.5e-06 55.1 61 41.0
Medtr2g436070 Medicago truncatula HOM05D000036 ORTHO05D000441 3.5e-06 55.1 62 38.7
RcHm_v2.0_Chr2g0115181 Rosa chinensis HOM05D000036 ORTHO05D000441 3.5e-06 55.1 61 42.6
RcHm_v2.0_Chr4g0423371 Rosa chinensis HOM05D000036 ORTHO05D000441 3.5e-06 55.1 61 44.3
vmacro15211 Vaccinium macrocarpon HOM05D000036 ORTHO05D000441 3.5e-06 55.1 63 42.9
Actinidia13387 Actinidia chinensis HOM05D000036 ORTHO05D000441 4.5e-06 54.7 60 45.0
CsaV3_3G014870 Cucumis sativus L. HOM05D000036 ORTHO05D000441 4.5e-06 54.7 61 42.6
Lj3g0012240 Lotus japonicus HOM05D000036 ORTHO05D000441 4.5e-06 54.7 61 45.9
Nitab4.5_0001097g0120 Nicotiana tabacum HOM05D000036 ORTHO05D000441 4.5e-06 54.7 61 45.9
CSS0048761 Camellia sinensis var. sinensis HOM05D005204 ORTHO05D006037 5.9e-06 54.3 60 43.3
CARHR186350 Cardamine hirsuta HOM05D000036 ORTHO05D000441 5.9e-06 54.3 62 45.2
DCAR_030504 Daucus carota HOM05D000036 ORTHO05D000441 5.9e-06 54.3 60 40.0
FAN07G2630 Fragaria x ananassa HOM05D000036 ORTHO05D000441 5.9e-06 54.3 61 42.6
Hma1.2p1_0028F.1_g017770 Hydrangea macrophylla HOM05D000036 ORTHO05D029958 5.9e-06 54.3 61 42.6
Peaxi162Scf00646g00514 Petunia axillaris HOM05D000036 ORTHO05D000441 5.9e-06 54.3 59 44.1
Solyc12g099410.2 Solanum lycopersicum HOM05D000036 ORTHO05D000441 5.9e-06 54.3 60 46.7
CSS0034123 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000441 7.8e-06 53.9 63 38.1
Lj1g0008492 Lotus japonicus HOM05D000036 ORTHO05D000441 7.8e-06 53.9 61 45.9


User provided reference genes

Program Settings