Gene: COL.COLO4_13823

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_13823
  • Transcript Identifier COL.rna12609
  • Gene Type Coding gene
  • Location AWUE01015329.1 : 21262-23078 : positive

Gene Family Information

  • ID HOM05D000036
  • #Genes/#Species 5053/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna12609
  • GenBank OMO98545.1
  • id gene13795
  • gene_name COLO4_13823
  • uniprot A0A1R3JUM0

Descriptions

  • Description Pectinesterase, catalytic
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045490
IEA
GOA Databasepectin catabolic process
GO:0043086
IEA
GOA Databasenegative regulation of catalytic activity
GO:0042545
IEA
GOA Databasecell wall modification
GO:0042545
IEA
InterProcell wall modification
GO:0071555
IEA
GOA Databasecell wall organization
GO:0048359
ISO
PLAZA Integrative Orthologymucilage metabolic process involved in seed coat development AT5G49180
GO:0048358
ISO
PLAZA Integrative Orthologymucilage pectin biosynthetic process AT5G49180

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045330
IEA
GOA Databaseaspartyl esterase activity
GO:0030599
IEA
GOA Databasepectinesterase activity
GO:0030599
IEA
InterPropectinesterase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004857
IEA
GOA Databaseenzyme inhibitor activity
GO:0004857
IEA
InterProenzyme inhibitor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
IEA
GOA Databasecell wall
GO:0005576
IEA
GOA Databaseextracellular region
GO:0090406
ISO
PLAZA Integrative Orthologypollen tube AT3G06830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011050 Pectin lyase fold/virulence factor
IPR012334 Pectin lyase fold
IPR035513 Invertase/pectin methylesterase inhibitor domain superfamily
IPR006501 Pectinesterase inhibitor domain
IPR000070 Pectinesterase, catalytic
Mapman id Description
21.3.1.2.1 Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase