Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19839 Utricularia gibba HOM05D003539 ORTHO05D004111 0.0e+00 1084.3 554 100.0
MSTRG.20424 Avicennia marina HOM05D003539 ORTHO05D004111 7.1e-192 674.5 626 57.3
Oeu010807.1 Olea europaea HOM05D003539 ORTHO05D004111 9.9e-186 654.1 614 56.4
Oeu063413.2 Olea europaea HOM05D003539 ORTHO05D004111 2.9e-185 652.5 614 56.0
SGA_v2.0_scaffold36G14401 Striga asiatica HOM05D003539 ORTHO05D004111 3.5e-183 645.6 623 56.0
SGA_v2.0_scaffold172G38971 Striga asiatica HOM05D003539 ORTHO05D004111 3.6e-180 635.6 682 51.8
Migut.A00468 Erythranthe guttata HOM05D003539 ORTHO05D004111 3.3e-173 612.5 626 52.1
Cc07_g12170 Coffea canephora HOM05D003539 ORTHO05D004111 1.5e-170 603.6 623 52.3
Hma1.2p1_0085F.1_g044410 Hydrangea macrophylla HOM05D003539 ORTHO05D004111 1.4e-168 597.0 622 53.1
Dinv40214 Davidia involucrata HOM05D003539 ORTHO05D004111 5.4e-168 595.1 621 52.3
GSVIVG01026448001 Vitis vinifera HOM05D003539 ORTHO05D004111 2.8e-164 582.8 599 51.6
Dinv28297 Davidia involucrata HOM05D003539 ORTHO05D004111 8.1e-164 581.3 623 51.0
Nitab4.5_0000855g0080 Nicotiana tabacum HOM05D003539 ORTHO05D004111 6.4e-161 571.6 617 51.5
Nitab4.5_0000588g0180 Nicotiana tabacum HOM05D003539 ORTHO05D004111 1.6e-159 567.0 619 51.1
CSS0035723 Camellia sinensis var. sinensis HOM05D003539 ORTHO05D004111 3.5e-159 565.8 614 51.6
Nitab4.5_0003096g0020 Nicotiana tabacum HOM05D003539 ORTHO05D004111 9.6e-157 557.8 589 52.1
Nn5g28137 Nelumbo nucifera HOM05D003539 ORTHO05D004111 1.7e-153 547.0 618 48.7
ClCG02G000270 Citrullus lanatus HOM05D003539 ORTHO05D004111 2.2e-153 546.6 636 49.4
Sopen02g027000 Solanum pennellii HOM05D003539 ORTHO05D004111 2.9e-153 546.2 608 51.6
Eucgr.J02557 Eucalyptus grandis HOM05D003539 ORTHO05D004111 4.9e-153 545.4 623 47.5
Solyc02g082340.3 Solanum lycopersicum HOM05D003539 ORTHO05D004111 6.5e-153 545.0 608 50.8
Lsat_1_v5_gn_5_30740 Lactuca sativa HOM05D003539 ORTHO05D004111 1.1e-152 544.3 610 49.5
CAN.G1428.5 Capsicum annuum HOM05D003539 ORTHO05D004111 1.9e-152 543.5 614 49.8
TAR381G1444 Trochodendron aralioides HOM05D003539 ORTHO05D004111 2.5e-152 543.1 614 49.5
Manes.01G157300 Manihot esculenta HOM05D003539 ORTHO05D004111 9.3e-152 541.2 620 48.9
TWI79G1391 Tripterygium wilfordii HOM05D003539 ORTHO05D004111 4.6e-151 538.9 615 47.3
Sed0003470 Sechium edule HOM05D003539 ORTHO05D004111 7.9e-151 538.1 605 48.9
Lj2C504G7 Lonicera japonica HOM05D003539 ORTHO05D004111 2.3e-150 536.6 521 55.1
HanXRQChr16g0510861 Helianthus annuus HOM05D003539 ORTHO05D004111 1.1e-149 534.3 604 51.2
Sc06g0005250 Simmondsia chinensis HOM05D003539 ORTHO05D004111 1.6e-148 530.4 621 49.0
PGR044G1248 Punica granatum HOM05D003539 ORTHO05D004111 4.8e-148 528.9 619 46.8
vmacro18474 Vaccinium macrocarpon HOM05D003539 ORTHO05D004111 4.8e-148 528.9 635 47.4
Gohir.D03G066500 Gossypium hirsutum HOM05D003539 ORTHO05D004111 1.1e-147 527.7 616 47.4
Gorai.003G064600 Gossypium raimondii HOM05D003539 ORTHO05D004111 1.4e-147 527.3 616 47.4
CANSAT35G0647 Cannabis sativa HOM05D003539 ORTHO05D004111 2.0e-146 523.5 607 48.9
ECA233G1070 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.7e-146 521.5 608 48.4
Haze_03640 Corylus avellana HOM05D003539 ORTHO05D004111 1.3e-145 520.8 595 49.7
CiPaw.15G173100 Carya illinoinensis HOM05D003539 ORTHO05D004111 2.2e-145 520.0 599 49.2
Cfa007110 Carpinus fangiana HOM05D003539 ORTHO05D004111 2.9e-145 519.6 595 50.1
QL06p053198 Quercus lobata HOM05D003539 ORTHO05D004111 1.4e-144 517.3 591 49.2
Atru.chr3.55 Acer truncatum HOM05D003539 ORTHO05D004111 2.5e-144 516.5 614 47.6
Manes.11G091200 Manihot esculenta HOM05D003539 ORTHO05D004111 6.7e-142 508.4 604 46.5
Thecc.01G002200 Theobroma cacao HOM05D003539 ORTHO05D004111 7.4e-141 505.0 618 45.3
Lj4g0013403 Lotus japonicus HOM05D003539 ORTHO05D004111 1.1e-139 501.1 610 48.2
Glyma.16G112800 Glycine max HOM05D003539 ORTHO05D004111 2.4e-139 500.0 612 46.1
ClCG05G001500 Citrullus lanatus HOM05D003539 ORTHO05D004111 5.3e-139 498.8 637 45.4
Glyma.09G196200 Glycine max HOM05D003539 ORTHO05D004111 6.9e-139 498.4 614 45.9
Sed0013779 Sechium edule HOM05D003539 ORTHO05D004111 9.1e-139 498.0 504 52.0
Hund28202 Selenicereus undatus HOM05D003539 ORTHO05D004111 1.2e-138 497.7 584 49.8
Hund28214 Selenicereus undatus HOM05D003539 ORTHO05D004111 1.2e-138 497.7 584 49.8
CsaV3_3G008890 Cucumis sativus L. HOM05D003539 ORTHO05D004111 1.5e-138 497.3 515 51.1
Peaxi162Scf00677g00114 Petunia axillaris HOM05D003539 ORTHO05D004111 2.2e-137 493.4 610 46.9
Phvul.010G020100 Phaseolus vulgaris HOM05D003539 ORTHO05D004111 3.8e-137 492.7 615 45.2
TAR376G1176 Trochodendron aralioides HOM05D003539 ORTHO05D004111 1.2e-135 487.6 576 48.1
Rhsim08G0026200 Rhododendron simsii HOM05D003539 ORTHO05D004111 4.7e-135 485.7 645 45.6
Hund21770 Selenicereus undatus HOM05D003539 ORTHO05D004111 1.4e-134 484.2 632 47.0
EL10Ac4g09711 Beta vulgaris HOM05D003539 ORTHO05D004111 3.9e-134 482.6 622 45.0
Lalb_Chr05g0229501 Lupinus albus HOM05D003539 ORTHO05D004111 1.5e-133 480.7 606 45.9
COL.COLO4_16224 Corchorus olitorius HOM05D003539 ORTHO05D004111 4.4e-133 479.2 601 45.4
VMungo1309G1473 Vigna mungo HOM05D003539 ORTHO05D004111 7.4e-133 478.4 615 44.9
THA.LOC104814350 Tarenaya hassleriana HOM05D003539 ORTHO05D004111 1.3e-132 477.6 599 45.4
Lalb_Chr09g0334501 Lupinus albus HOM05D003539 ORTHO05D004111 4.8e-132 475.7 613 45.4
Potri.005G098500 Populus trichocarpa HOM05D003539 ORTHO05D004111 2.4e-131 473.4 617 43.3
arahy.Tifrunner.gnm1.ann1.PPI4NM Arachis hypogaea HOM05D003539 ORTHO05D004111 5.3e-131 472.2 677 42.4
HanXRQChr09g0270331 Helianthus annuus HOM05D003539 ORTHO05D004111 1.5e-130 470.7 590 47.3
MBI04_g31205_MAGBIO Magnolia biondii HOM05D003539 ORTHO05D004111 5.9e-130 468.8 598 46.2
MELO3C006107.2 Cucumis melo HOM05D003539 ORTHO05D004111 2.9e-129 466.5 535 49.3
arahy.Tifrunner.gnm1.ann1.4LH58N Arachis hypogaea HOM05D003539 ORTHO05D004111 6.5e-129 465.3 706 40.5
Aa31LG10G6570 Aethionema arabicum HOM05D003539 ORTHO05D004111 7.2e-128 461.8 608 43.4
Carub.0004s1644 Capsella rubella HOM05D003539 ORTHO05D004111 1.6e-127 460.7 605 43.5
Prupe.7G186400 Prunus persica HOM05D003539 ORTHO05D004111 4.7e-127 459.1 612 45.8
Aa31LG6G11830 Aethionema arabicum HOM05D003539 ORTHO05D004111 1.4e-126 457.6 594 44.9
CARHR128910 Cardamine hirsuta HOM05D003539 ORTHO05D004111 1.8e-126 457.2 602 45.2
arahy.Tifrunner.gnm1.ann1.VZS2MK Arachis hypogaea HOM05D003539 ORTHO05D004111 5.2e-126 455.7 713 39.4
Ca_21575_v3 Cicer arietinum L. HOM05D003539 ORTHO05D004111 5.2e-126 455.7 590 44.2
AL4G30740 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 8.8e-126 454.9 605 43.5
arahy.Tifrunner.gnm1.ann1.UQ0JCX Arachis hypogaea HOM05D003539 ORTHO05D004111 1.1e-125 454.5 707 39.6
Sabra05G0080900 Salix brachista HOM05D003539 ORTHO05D004111 1.1e-125 454.5 597 42.7
Medtr4g117680 Medicago truncatula HOM05D003539 ORTHO05D004111 2.0e-125 453.8 636 41.8
PSO017G0405 Papaver somniferum HOM05D003539 ORTHO05D004111 4.4e-125 452.6 604 43.7
MD02G1108900 Malus domestica HOM05D003539 ORTHO05D004111 4.8e-124 449.1 613 45.2
PSO170G6051 Papaver somniferum HOM05D003539 ORTHO05D004111 1.1e-123 448.0 598 43.5
AT2G34750 Arabidopsis thaliana HOM05D003539 ORTHO05D004111 3.1e-123 446.4 600 43.5
Thhalv10016395m.g Eutrema salsugineum HOM05D003539 ORTHO05D004111 4.1e-123 446.0 607 42.7
Peaxi162Scf00344g01722 Petunia axillaris HOM05D003539 ORTHO05D004111 2.6e-122 443.4 648 42.9
Sp4g17040 Schrenkiella parvula HOM05D003539 ORTHO05D004111 1.3e-121 441.0 606 41.9
Duzib147G0916 Durio zibethinus HOM05D003539 ORTHO05D004111 2.2e-121 440.3 617 42.6
Actinidia28753 Actinidia chinensis HOM05D003539 ORTHO05D004111 6.5e-121 438.7 615 43.4
AUR62006940 Chenopodium quinoa HOM05D003539 ORTHO05D004111 1.1e-120 438.0 578 45.5
TPR.G29658 Trifolium pratense HOM05D003539 ORTHO05D004111 2.5e-120 436.8 630 42.7
Aqoxy6G01535 Aquilegia oxysepala HOM05D003539 ORTHO05D004111 4.2e-120 436.0 628 42.2
Haze_00123 Corylus avellana HOM05D003539 ORTHO05D004111 9.4e-120 434.9 591 44.8
Aqoxy3G00418 Aquilegia oxysepala HOM05D003539 ORTHO05D004111 3.6e-119 433.0 626 41.9
Thhalv10007103m.g Eutrema salsugineum HOM05D003539 ORTHO05D004111 3.6e-119 433.0 608 41.8
arahy.Tifrunner.gnm1.ann1.JIK3X3 Arachis hypogaea HOM05D003539 ORTHO05D004111 3.0e-118 429.9 694 39.2
BcaB06g28796 Brassica carinata HOM05D003539 ORTHO05D004111 3.4e-117 426.4 586 43.0
Peaxi162Scf00015g00939 Petunia axillaris HOM05D003539 ORTHO05D004111 4.4e-117 426.0 612 45.1
Cfa016374 Carpinus fangiana HOM05D003539 ORTHO05D004111 9.7e-117 424.9 570 43.9
CDE07G0217 Ceratophyllum demersum HOM05D003539 ORTHO05D004111 1.3e-116 424.5 521 45.3
Sc09g0001980 Simmondsia chinensis HOM05D003539 ORTHO05D004111 6.3e-116 422.2 516 48.3
BolC3t14644H Brassica oleracea HOM05D003539 ORTHO05D004111 1.8e-115 420.6 599 41.9
Ah.06g188300 Amaranthus hybridus HOM05D003539 ORTHO05D004111 2.4e-115 420.2 609 42.0
C03p22480 Brassica napus HOM05D003539 ORTHO05D004111 1.6e-114 417.5 599 41.7
Psat7g042440 Pisum sativum HOM05D003539 ORTHO05D004111 3.5e-114 416.4 631 40.6
AL1G44630 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 5.9e-114 415.6 595 42.2
Carub.0001s2885 Capsella rubella HOM05D003539 ORTHO05D004111 1.3e-113 414.5 589 42.8
BraA03t11183Z Brassica rapa HOM05D003539 ORTHO05D004111 1.7e-113 414.1 607 41.4
Psat3g044960 Pisum sativum HOM05D003539 ORTHO05D004111 1.7e-113 414.1 539 44.2
Aqoxy3G00897 Aquilegia oxysepala HOM05D003539 ORTHO05D004111 2.2e-113 413.7 579 43.2
A04p26550 Brassica napus HOM05D003539 ORTHO05D004111 2.2e-113 413.7 582 43.0
RcHm_v2.0_Chr2g0096801 Rosa chinensis HOM05D003539 ORTHO05D004111 5.0e-113 412.5 617 42.1
A03p19290 Brassica napus HOM05D003539 ORTHO05D004111 6.5e-113 412.1 607 41.0
BraA04t18159Z Brassica rapa HOM05D003539 ORTHO05D004111 2.7e-111 406.8 609 40.9
FAN26G1725 Fragaria x ananassa HOM05D003539 ORTHO05D004111 6.8e-110 402.1 618 41.4
FAN28G2151 Fragaria x ananassa HOM05D003539 ORTHO05D004111 6.8e-110 402.1 618 41.4
AUR62000583 Chenopodium quinoa HOM05D003539 ORTHO05D004111 4.4e-109 399.4 586 43.0
FvH4_1g10010 Fragaria vesca HOM05D003539 ORTHO05D004111 9.8e-109 398.3 618 41.1
THA.LOC104798595 Tarenaya hassleriana HOM05D003539 ORTHO05D004111 1.8e-107 394.0 544 42.1
FAN19G1026 Fragaria x ananassa HOM05D003539 ORTHO05D004111 5.4e-107 392.5 629 40.7
FAN23G2523 Fragaria x ananassa HOM05D003539 ORTHO05D004111 9.1e-107 391.7 637 40.2
Os06g0688100 Oryza sativa ssp. japonica HOM05D003539 ORTHO05D004111 1.0e-105 388.3 577 39.9
SalBow7G2073 Salvia bowleyana HOM05D003539 ORTHO05D004111 1.1e-104 384.8 367 55.6
ATR0605G358 Amborella trichopoda HOM05D003539 ORTHO05D004111 2.3e-102 377.1 528 41.1
SEGI_33601 Sequoiadendron giganteum HOM05D003539 ORTHO05D004111 2.3e-102 377.1 603 37.8
Gohir.A02G120000 Gossypium hirsutum HOM05D003539 ORTHO05D004111 2.6e-101 373.6 448 45.8
AT1G30590 Arabidopsis thaliana HOM05D003539 ORTHO05D004111 3.7e-100 369.8 542 41.1
Zm00001eb226160 Zea mays HOM05D003539 ORTHO05D004111 1.8e-99 367.5 584 38.2
Carub.0004s2129 Capsella rubella HOM05D003539 ORTHO05D004111 4.5e-98 362.8 604 38.6
AL4G35010 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 1.0e-97 361.7 600 38.3
C04p14010 Brassica napus HOM05D003539 ORTHO05D004111 1.6e-95 354.4 597 38.2
BolC4t22991H Brassica oleracea HOM05D003539 ORTHO05D004111 2.8e-95 353.6 597 37.9
BraA05t20035Z Brassica rapa HOM05D003539 ORTHO05D004111 2.8e-95 353.6 588 37.2
AT2G39240 Arabidopsis thaliana HOM05D003539 ORTHO05D004111 3.1e-94 350.1 595 39.0
BcaC06g35972 Brassica carinata HOM05D003539 ORTHO05D004111 5.8e-93 345.9 579 38.3
C07p01640 Brassica napus HOM05D003539 ORTHO05D004111 9.2e-91 338.6 562 38.8
Mapoly0144s0013 Marchantia polymorpha HOM05D003539 ORTHO05D004111 1.2e-87 328.2 558 37.6
SMO356G0429 Selaginella moellendorffii HOM05D003539 ORTHO05D004111 2.3e-81 307.4 604 35.8
Pp3c18_6750 Physcomitrium patens HOM05D003539 ORTHO05D004111 3.9e-81 306.6 572 36.4
Pp3c18_6751 Physcomitrium patens HOM05D003539 ORTHO05D004111 3.9e-81 306.6 572 36.4
BcaC02g11551 Brassica carinata HOM05D003539 ORTHO05D004111 6.6e-81 305.8 606 35.3
Oeu000297.1 Olea europaea HOM05D003539 ORTHO05D004111 2.1e-79 300.8 257 61.9
Pp3c21_14490 Physcomitrium patens HOM05D003539 ORTHO05D004111 2.1e-79 300.8 561 35.8
AL4G36550 Arabidopsis lyrata HOM05D003539 ORTHO05D004111 1.1e-75 288.5 559 37.0
SalBow7G0297 Salvia bowleyana HOM05D003539 ORTHO05D004111 1.3e-73 281.6 263 57.8
Actinidia20762 Actinidia chinensis HOM05D003539 ORTHO05D004111 4.3e-72 276.6 293 53.2
BcaC01g05764 Brassica carinata HOM05D003539 ORTHO05D004111 6.8e-70 269.2 398 40.2
AagrBONN_evm.TU.Sc2ySwM_368.2744 Anthoceros agrestis HOM05D003539 ORTHO05D004111 5.4e-67 259.6 540 33.1
C04p63970 Brassica napus HOM05D003539 ORTHO05D004111 7.1e-67 259.2 416 39.2
C07p01430 Brassica napus HOM05D003539 ORTHO05D004111 2.1e-66 257.7 427 39.6
Actinidia02872 Actinidia chinensis HOM05D003539 ORTHO05D004111 1.5e-64 251.5 260 52.7
DCAR_007550 Daucus carota HOM05D003539 ORTHO05D004111 3.1e-62 243.8 259 52.5
HPP92_018392 Vanilla planifolia HOM05D003539 ORTHO05D004111 1.3e-60 238.4 405 37.5
Actinidia20763 Actinidia chinensis HOM05D003539 ORTHO05D004111 5.4e-59 233.0 330 43.9
BolC4t27866H Brassica oleracea HOM05D003539 ORTHO05D004111 2.4e-54 217.6 247 50.2
FAN23G0637 Fragaria x ananassa HOM05D003539 ORTHO05D004111 1.5e-53 214.9 353 39.7
SHI13961 Sapria himalayana HOM05D003539 ORTHO05D004111 1.7e-44 184.9 346 36.4
DCAR_007549 Daucus carota HOM05D003539 ORTHO05D004111 1.0e-41 175.6 178 51.7
BcaC06g35980 Brassica carinata HOM05D003539 ORTHO05D004111 1.8e-41 174.9 230 45.2
Ciclev10010838m.g Citrus clementina HOM05D003539 ORTHO05D004111 3.7e-39 167.2 184 49.5
GSVIVG01026439001 Vitis vinifera HOM05D003539 ORTHO05D004111 2.2e-36 157.9 163 50.3
Gohir.A02G119802 Gossypium hirsutum HOM05D003539 ORTHO05D004111 7.2e-35 152.9 158 51.9
PSO782G3432 Papaver somniferum HOM05D003539 ORTHO05D004111 6.1e-34 149.8 271 34.7
Cre03.g207950 Chlamydomonas reinhardtii HOM05D003539 ORTHO05D004111 5.7e-32 143.3 593 23.6
RcHm_v2.0_Chr2g0096841 Rosa chinensis HOM05D003539 ORTHO05D004111 4.6e-26 123.6 206 37.9
BcaB05g23816 Brassica carinata HOM05D003539 ORTHO05D004111 7.9e-26 122.9 317 30.3
Cfa022324 Carpinus fangiana HOM05D003539 ORTHO05D004111 3.1e-22 110.9 608 22.4
PRCOL_00004831 Prasinoderma coloniale HOM05D003539 ORTHO05D004111 5.3e-22 110.2 547 22.9
CBR_g23267 Chara braunii HOM05D000019 ORTHO05D000048 9.1e-22 109.4 174 35.6
arahy.Tifrunner.gnm1.ann1.PJLZ8M Arachis hypogaea HOM05D003539 ORTHO05D004111 2.6e-21 107.8 168 36.3
BcaC06g35981 Brassica carinata HOM05D003539 ORTHO05D004111 1.3e-20 105.5 193 34.2
CBR_g23271 Chara braunii HOM05D003539 ORTHO05D004111 1.1e-19 102.4 297 29.0
EL10Ac6g14558 Beta vulgaris HOM05D003539 ORTHO05D004111 1.0e-17 95.9 105 50.5
Cpa.g.sc7.212 Carica papaya HOM05D003539 ORTHO05D004111 3.7e-15 87.4 186 33.3
HanXRQChr05g0145981 Helianthus annuus HOM05D003539 ORTHO05D004111 6.3e-15 86.7 138 41.3
C03p59690 Brassica napus HOM05D003539 ORTHO05D004111 2.0e-13 81.6 94 45.7
BolC3t18231H Brassica oleracea HOM05D003539 ORTHO05D004111 2.0e-13 81.6 94 45.7
Cpa.g.sc7.213 Carica papaya HOM05D003539 ORTHO05D004111 1.5e-11 75.5 65 47.7
Medtr8g085920 Medicago truncatula HOM05D003539 ORTHO05D004111 6.1e-10 70.1 80 47.5
Potri.007G065101 Populus trichocarpa HOM05D003539 ORTHO05D004111 6.1e-10 70.1 156 32.1
Cfa022001 Carpinus fangiana HOM05D003539 ORTHO05D004111 1.0e-09 69.3 81 42.0
Medtr4g117730 Medicago truncatula HOM05D003539 ORTHO05D004111 2.2e-07 61.6 69 49.3
MCO15G598 Micromonas commoda HOM05D003539 ORTHO05D004111 8.2e-07 59.7 285 23.2
RcHm_v2.0_Chr2g0096831 Rosa chinensis HOM05D003539 ORTHO05D004111 8.2e-07 59.7 148 29.7
GSVIVG01026437001 Vitis vinifera HOM05D003539 ORTHO05D004111 3.1e-06 57.8 45 60.0


User provided reference genes

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