Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19654 Utricularia gibba HOM05D004222 ORTHO05D004982 1.4e-96 356.3 182 100.0
Cc02_g29210 Coffea canephora HOM05D004222 ORTHO05D004982 9.4e-69 263.8 183 73.8
Oeu026248.1 Olea europaea HOM05D004222 ORTHO05D004982 1.6e-68 263.1 179 74.9
Oeu043649.1 Olea europaea HOM05D004222 ORTHO05D004982 3.0e-67 258.8 190 70.0
Nitab4.5_0003780g0070 Nicotiana tabacum HOM05D004222 ORTHO05D004982 5.2e-67 258.1 182 73.6
GSVIVG01016750001 Vitis vinifera HOM05D004222 ORTHO05D004982 5.2e-67 258.1 175 73.1
Nitab4.5_0006737g0050 Nicotiana tabacum HOM05D004222 ORTHO05D004982 2.0e-66 256.1 182 73.1
Cc04_g01280 Coffea canephora HOM05D004222 ORTHO05D004982 3.4e-66 255.4 183 72.1
Manes.11G019600 Manihot esculenta HOM05D004222 ORTHO05D004982 3.4e-66 255.4 172 75.0
Migut.I01080 Erythranthe guttata HOM05D004222 ORTHO05D004982 7.5e-66 254.2 177 72.3
Dinv15742 Davidia involucrata HOM05D004222 ORTHO05D004982 9.8e-66 253.8 176 72.2
Rhsim08G0239600 Rhododendron simsii HOM05D004222 ORTHO05D004982 9.8e-66 253.8 175 69.7
Rhsim01G0228800 Rhododendron simsii HOM05D004222 ORTHO05D004982 1.3e-65 253.4 175 70.9
Solyc04g010090.3 Solanum lycopersicum HOM05D004222 ORTHO05D004982 1.3e-65 253.4 182 72.0
Sopen04g005230 Solanum pennellii HOM05D004222 ORTHO05D004982 1.3e-65 253.4 182 72.0
TAR383G0284 Trochodendron aralioides HOM05D004222 ORTHO05D004982 1.3e-65 253.4 177 70.6
vmacro16353 Vaccinium macrocarpon HOM05D004222 ORTHO05D004982 2.8e-65 252.3 175 69.7
vmacro15039 Vaccinium macrocarpon HOM05D004222 ORTHO05D004982 3.7e-65 251.9 175 70.9
Potri.001G168300 Populus trichocarpa HOM05D004222 ORTHO05D004982 4.9e-65 251.5 171 74.3
PGSC0003DMG400011493 Solanum tuberosum HOM05D004222 ORTHO05D004982 4.9e-65 251.5 182 72.0
Manes.04G145400 Manihot esculenta HOM05D004222 ORTHO05D004982 6.3e-65 251.1 175 70.9
Sabra01G0142300 Salix brachista HOM05D004222 ORTHO05D004982 8.3e-65 250.8 174 73.0
ECA232G1089 Erigeron canadensis HOM05D004222 ORTHO05D004982 2.4e-64 249.2 176 71.6
Lsat_1_v5_gn_4_74980 Lactuca sativa HOM05D004222 ORTHO05D004982 2.4e-64 249.2 176 70.5
Lj9A532G68 Lonicera japonica HOM05D004222 ORTHO05D004982 2.4e-64 249.2 174 70.7
Lj9C524T6 Lonicera japonica HOM05D004222 ORTHO05D004982 2.4e-64 249.2 174 70.7
Dinv37865 Davidia involucrata HOM05D004222 ORTHO05D004982 4.1e-64 248.4 175 69.7
CiPaw.01G218100 Carya illinoinensis HOM05D004222 ORTHO05D004982 5.4e-64 248.1 171 71.3
Duzib235G1272 Durio zibethinus HOM05D004222 ORTHO05D004982 7.0e-64 247.7 171 72.5
Haze_16054 Corylus avellana HOM05D004222 ORTHO05D004982 1.2e-63 246.9 171 70.2
MSTRG.9521 Avicennia marina HOM05D004222 ORTHO05D004982 2.0e-63 246.1 183 69.4
FAN09G4904 Fragaria x ananassa HOM05D004222 ORTHO05D004982 2.0e-63 246.1 170 72.4
CSS0031925 Camellia sinensis var. sinensis HOM05D004222 ORTHO05D004982 2.7e-63 245.7 177 71.2
Hma1.2p1_0074F.1_g038830 Hydrangea macrophylla HOM05D004222 ORTHO05D004982 2.7e-63 245.7 175 70.3
Hma1.2p1_3000F.1_g331525 Hydrangea macrophylla HOM05D004222 ORTHO05D004982 2.7e-63 245.7 175 70.3
CAN.G786.39 Capsicum annuum HOM05D004222 ORTHO05D004982 3.5e-63 245.4 182 70.3
SalBow6G6030 Salvia bowleyana HOM05D004222 ORTHO05D004982 3.5e-63 245.4 178 69.7
SGA_v2.0_scaffold4G02066 Striga asiatica HOM05D004222 ORTHO05D004982 4.5e-63 245.0 180 71.7
Gohir.D10G055400 Gossypium hirsutum HOM05D004222 ORTHO05D004982 1.0e-62 243.8 171 71.9
Gorai.011G059100 Gossypium raimondii HOM05D004222 ORTHO05D004982 1.3e-62 243.4 171 71.9
SGA_v2.0_scaffold68G22854 Striga asiatica HOM05D004222 ORTHO05D004982 2.3e-62 242.7 180 70.0
Cfa003517 Carpinus fangiana HOM05D004222 ORTHO05D004982 2.9e-62 242.3 168 70.8
QL05p004213 Quercus lobata HOM05D004222 ORTHO05D004982 2.9e-62 242.3 176 70.5
AUR62006751 Chenopodium quinoa HOM05D004222 ORTHO05D004982 3.8e-62 241.9 175 68.6
ECA232G2519 Erigeron canadensis HOM05D004222 ORTHO05D004982 3.8e-62 241.9 176 70.5
SalBow6G3336 Salvia bowleyana HOM05D004222 ORTHO05D004982 3.8e-62 241.9 178 69.1
Actinidia32191 Actinidia chinensis HOM05D004222 ORTHO05D004982 5.0e-62 241.5 175 69.7
Actinidia21792 Actinidia chinensis HOM05D004222 ORTHO05D004982 6.6e-62 241.1 175 70.3
BolC3t21520H Brassica oleracea HOM05D004222 ORTHO05D004982 6.6e-62 241.1 178 68.5
Gohir.A10G053600 Gossypium hirsutum HOM05D004222 ORTHO05D004982 6.6e-62 241.1 171 71.3
CiPaw.02G135300 Carya illinoinensis HOM05D004222 ORTHO05D004982 8.6e-62 240.7 171 70.8
FvH4_6g34870 Fragaria vesca HOM05D004222 ORTHO05D004982 8.6e-62 240.7 170 71.2
FAN14G1002 Fragaria x ananassa HOM05D004222 ORTHO05D004982 8.6e-62 240.7 170 71.2
SalBow6G2027 Salvia bowleyana HOM05D004222 ORTHO05D004982 1.1e-61 240.4 178 68.5
Atru.chr1.3997 Acer truncatum HOM05D004222 ORTHO05D004982 1.5e-61 240.0 175 69.1
BcaC01g01437 Brassica carinata HOM05D004222 ORTHO05D004982 1.9e-61 239.6 178 68.0
A08p01190 Brassica napus HOM05D004222 ORTHO05D004982 1.9e-61 239.6 178 68.0
C03p92020 Brassica napus HOM05D004222 ORTHO05D004982 1.9e-61 239.6 178 68.0
BraA08t32170Z Brassica rapa HOM05D004222 ORTHO05D004982 1.9e-61 239.6 178 68.0
DCAR_002631 Daucus carota HOM05D004222 ORTHO05D004982 5.6e-61 238.0 175 68.0
FAN02G1508 Fragaria x ananassa HOM05D004222 ORTHO05D004982 5.6e-61 238.0 170 70.6
Sp1g40590 Schrenkiella parvula HOM05D004222 ORTHO05D004982 5.6e-61 238.0 180 67.2
Glyma.17G037200 Glycine max HOM05D004222 ORTHO05D004982 9.5e-61 237.3 183 67.2
Thecc.06G121100 Theobroma cacao HOM05D004222 ORTHO05D004982 1.2e-60 236.9 178 69.1
Thhalv10012402m.g Eutrema salsugineum HOM05D004222 ORTHO05D004982 1.6e-60 236.5 180 67.2
COL.COLO4_30749 Corchorus olitorius HOM05D004222 ORTHO05D004982 2.1e-60 236.1 179 65.4
DCAR_023344 Daucus carota HOM05D004222 ORTHO05D004982 2.8e-60 235.7 174 66.7
RcHm_v2.0_Chr2g0145741 Rosa chinensis HOM05D004222 ORTHO05D004982 3.6e-60 235.3 173 67.1
BcaB04g17022 Brassica carinata HOM05D004222 ORTHO05D004982 4.7e-60 235.0 178 66.3
AUR62000395 Chenopodium quinoa HOM05D004222 ORTHO05D004982 4.7e-60 235.0 175 66.9
Ciclev10032895m.g Citrus clementina HOM05D004222 ORTHO05D004982 8.0e-60 234.2 174 68.4
CsaV3_7G034430 Cucumis sativus L. HOM05D004222 ORTHO05D004982 1.0e-59 233.8 176 68.2
TAR626G0656 Trochodendron aralioides HOM05D004222 ORTHO05D004982 1.0e-59 233.8 178 66.9
Eucgr.G03389 Eucalyptus grandis HOM05D004222 ORTHO05D004982 1.4e-59 233.4 170 68.2
Lalb_Chr13g0298711 Lupinus albus HOM05D004222 ORTHO05D004982 1.4e-59 233.4 185 66.5
Glyma.07G236200 Glycine max HOM05D004222 ORTHO05D004982 1.8e-59 233.0 183 66.7
MD09G1181700 Malus domestica HOM05D004222 ORTHO05D004982 1.8e-59 233.0 170 70.0
PGR031G1684 Punica granatum HOM05D004222 ORTHO05D004982 2.3e-59 232.6 172 70.3
EL10Ac4g09456 Beta vulgaris HOM05D004222 ORTHO05D004982 3.0e-59 232.3 175 66.3
Sc16g0009040 Simmondsia chinensis HOM05D004222 ORTHO05D004982 3.0e-59 232.3 174 67.2
PSO135G0791 Papaver somniferum HOM05D004222 ORTHO05D004982 4.0e-59 231.9 183 65.0
Lj4g0027352 Lotus japonicus HOM05D004222 ORTHO05D004982 5.2e-59 231.5 176 67.0
Ciclev10026608m.g Citrus clementina HOM05D004222 ORTHO05D004982 8.9e-59 230.7 174 64.9
Nn2g10347 Nelumbo nucifera HOM05D004222 ORTHO05D004982 8.9e-59 230.7 169 68.6
AL1G62860 Arabidopsis lyrata HOM05D004222 ORTHO05D004982 2.0e-58 229.6 180 66.7
MELO3C024352.2 Cucumis melo HOM05D004222 ORTHO05D004982 2.0e-58 229.6 174 66.1
Eucgr.H02488 Eucalyptus grandis HOM05D004222 ORTHO05D004982 2.6e-58 229.2 170 67.6
Phvul.003G118200 Phaseolus vulgaris HOM05D004222 ORTHO05D004982 2.6e-58 229.2 183 63.9
AT1G54140 Arabidopsis thaliana HOM05D004222 ORTHO05D004982 4.4e-58 228.4 181 65.7
Prupe.3G039800 Prunus persica HOM05D004222 ORTHO05D004982 4.4e-58 228.4 173 68.2
arahy.Tifrunner.gnm1.ann1.J7IGQN Arachis hypogaea HOM05D004222 ORTHO05D004982 9.8e-58 227.3 179 66.5
arahy.Tifrunner.gnm1.ann1.M5IJ04 Arachis hypogaea HOM05D004222 ORTHO05D004982 9.8e-58 227.3 179 66.5
Peaxi162Scf00528g00226 Petunia axillaris HOM05D004222 ORTHO05D004982 9.8e-58 227.3 172 66.9
AL1G63010 Arabidopsis lyrata HOM05D004222 ORTHO05D004982 1.3e-57 226.9 181 65.7
ClCG09G000990 Citrullus lanatus HOM05D004222 ORTHO05D004982 1.3e-57 226.9 173 68.2
Ca_21404_v3 Cicer arietinum L. HOM05D004222 ORTHO05D004982 1.7e-57 226.5 183 65.6
Ca_21419_v3 Cicer arietinum L. HOM05D004222 ORTHO05D004982 1.7e-57 226.5 183 65.6
Ah.04g158670 Amaranthus hybridus HOM05D004222 ORTHO05D004982 2.9e-57 225.7 174 65.5
Carub.0001s4338 Capsella rubella HOM05D004222 ORTHO05D004982 3.7e-57 225.3 182 64.8
TWI31G0208 Tripterygium wilfordii HOM05D004222 ORTHO05D004982 3.7e-57 225.3 169 67.5
ATR0598G103 Amborella trichopoda HOM05D004222 ORTHO05D004982 4.9e-57 224.9 182 64.3
PSO724G0032 Papaver somniferum HOM05D004222 ORTHO05D004982 4.9e-57 224.9 184 62.5
THA.LOC104810368 Tarenaya hassleriana HOM05D004222 ORTHO05D004982 4.9e-57 224.9 181 64.1
CARHR044490 Cardamine hirsuta HOM05D004222 ORTHO05D004982 8.3e-57 224.2 178 65.2
BcaC08g44165 Brassica carinata HOM05D004222 ORTHO05D004982 1.1e-56 223.8 178 64.6
Glyma.02G277500 Glycine max HOM05D004222 ORTHO05D004982 1.4e-56 223.4 184 63.0
C06p15670 Brassica napus HOM05D004222 ORTHO05D004982 2.4e-56 222.6 156 72.4
CANSAT64G2454 Cannabis sativa HOM05D004222 ORTHO05D004982 2.4e-56 222.6 136 80.1
Medtr4g123000 Medicago truncatula HOM05D004222 ORTHO05D004982 2.4e-56 222.6 184 64.1
TWI75G1350 Tripterygium wilfordii HOM05D004222 ORTHO05D004982 2.4e-56 222.6 169 66.3
Medtr3g015130 Medicago truncatula HOM05D004222 ORTHO05D004982 4.1e-56 221.9 184 63.6
Sed0002362 Sechium edule HOM05D004222 ORTHO05D004982 4.1e-56 221.9 174 64.9
BcaB02g10859 Brassica carinata HOM05D004222 ORTHO05D004982 7.0e-56 221.1 173 65.9
SEGI_03819 Sequoiadendron giganteum HOM05D004222 ORTHO05D004982 4.6e-55 218.4 175 62.9
BolC6t36754H Brassica oleracea HOM05D004222 ORTHO05D004982 5.9e-55 218.0 178 63.5
Psat0s1953g0320 Pisum sativum HOM05D004222 ORTHO05D004982 1.7e-54 216.5 186 62.4
Aqoxy5G01362 Aquilegia oxysepala HOM05D004222 ORTHO05D004982 2.3e-54 216.1 177 63.3
Ah.06g195960 Amaranthus hybridus HOM05D004222 ORTHO05D004982 3.0e-54 215.7 174 61.5
VMungo0647G2371 Vigna mungo HOM05D004222 ORTHO05D004982 1.9e-53 213.0 177 63.8
CDE08G1040 Ceratophyllum demersum HOM05D004222 ORTHO05D004982 3.3e-53 212.2 174 60.3
PGR042G1688 Punica granatum HOM05D004222 ORTHO05D004982 3.3e-53 212.2 145 71.0
Phvul.008G203400 Phaseolus vulgaris HOM05D004222 ORTHO05D004982 9.5e-53 210.7 177 64.4
Aa31LG10G1270 Aethionema arabicum HOM05D004222 ORTHO05D004982 4.7e-52 208.4 140 70.7
HanXRQChr09g0262591 Helianthus annuus HOM05D004222 ORTHO05D004982 1.8e-51 206.5 157 65.6
TPR.G18581 Trifolium pratense HOM05D004222 ORTHO05D004982 4.0e-51 205.3 184 60.3
HPP92_016607 Vanilla planifolia HOM05D004222 ORTHO05D004982 5.8e-50 201.4 171 64.3
Dinv10670 Davidia involucrata HOM05D004222 ORTHO05D004982 1.3e-49 200.3 126 77.8
MBI05_g15473_MAGBIO Magnolia biondii HOM05D004222 ORTHO05D004982 1.3e-49 200.3 141 68.8
VMungo1215G2100 Vigna mungo HOM05D004222 ORTHO05D004982 1.3e-49 200.3 258 45.7
Os03g0408500 Oryza sativa ssp. japonica HOM05D004222 ORTHO05D004982 3.0e-46 189.1 178 59.0
Mapoly0152s0015 Marchantia polymorpha HOM05D004222 ORTHO05D004982 3.9e-46 188.7 185 52.4
Atru.chr1.2991 Acer truncatum HOM05D004222 ORTHO05D004982 1.5e-45 186.8 118 74.6
SHI11210 Sapria himalayana HOM05D004222 ORTHO05D004982 1.9e-45 186.4 134 64.9
Pp3c19_19770 Physcomitrium patens HOM05D004222 ORTHO05D004982 1.1e-43 180.6 178 55.1
SMO340G0157 Selaginella moellendorffii HOM05D004222 ORTHO05D004982 2.3e-43 179.5 143 59.4
Zm00001eb392970 Zea mays HOM05D004222 ORTHO05D004982 2.6e-42 176.0 141 63.8
CBR_g52315 Chara braunii HOM05D004222 ORTHO05D004982 5.8e-42 174.9 207 45.9
Zm00001eb019630 Zea mays HOM05D004222 ORTHO05D004982 2.9e-41 172.6 183 55.2
AagrBONN_evm.TU.Sc2ySwM_117.372 Anthoceros agrestis HOM05D004222 ORTHO05D004982 6.4e-41 171.4 180 50.0
AUR62029931 Chenopodium quinoa HOM05D004222 ORTHO05D004982 3.8e-33 145.6 94 72.3
Cc02_g29240 Coffea canephora HOM05D004222 ORTHO05D004982 1.4e-32 143.7 121 62.0
HanXRQChr14g0440851 Helianthus annuus HOM05D004222 ORTHO05D004982 7.1e-32 141.4 176 44.3
Ah.06g188160 Amaranthus hybridus HOM05D000059 ORTHO05D004982 3.5e-31 139.0 130 56.2
AUR62043147 Chenopodium quinoa HOM05D004222 ORTHO05D004982 4.6e-31 138.7 85 76.5
AUR62033567 Chenopodium quinoa HOM05D004222 ORTHO05D004982 2.3e-30 136.3 80 77.5
Thhalv10029376m.g Eutrema salsugineum HOM05D004222 ORTHO05D004982 3.9e-30 135.6 102 67.6
Eucgr.J01267 Eucalyptus grandis HOM05D004222 ORTHO05D004982 1.5e-29 133.7 176 43.8
TPR.G12685 Trifolium pratense HOM05D004222 ORTHO05D004982 3.3e-29 132.5 89 75.3
C06p09920 Brassica napus HOM05D004222 ORTHO05D004982 8.1e-28 127.9 129 58.9
Duzib160G0511 Durio zibethinus HOM05D004222 ORTHO05D004982 2.4e-27 126.3 109 60.6
Cre07.g353350 Chlamydomonas reinhardtii HOM05D004222 ORTHO05D004982 2.5e-21 106.3 126 42.1
PRCOL_00004328 Prasinoderma coloniale HOM05D004222 ORTHO05D004982 1.3e-20 104.0 127 46.5
BcaC08g43594 Brassica carinata HOM05D004222 ORTHO05D004982 3.6e-20 102.4 91 62.6
BolC6t36064H Brassica oleracea HOM05D004222 ORTHO05D004982 3.6e-20 102.4 91 62.6
Haze_26828 Corylus avellana HOM05D000371 ORTHO05D004982 4.0e-19 99.0 105 46.7
Os07g0612500 Oryza sativa ssp. japonica HOM05D004222 ORTHO05D004982 3.4e-18 95.9 147 37.4
TPR.G10895 Trifolium pratense HOM05D004222 ORTHO05D004982 1.3e-17 94.0 95 52.6
unitig_52.g17107 Utricularia gibba HOM05D004222 ORTHO05D004982 2.1e-15 86.7 84 57.1
FAN05G5041 Fragaria x ananassa HOM05D004222 ORTHO05D004982 2.7e-15 86.3 86 51.2
AUR62034601 Chenopodium quinoa HOM05D004222 ORTHO05D004982 4.3e-13 79.0 43 79.1
Medtr6g027990 Medicago truncatula HOM05D004222 ORTHO05D004982 2.4e-11 73.2 60 61.7
MCO04G196 Micromonas commoda HOM05D004222 ORTHO05D004982 9.0e-11 71.2 100 36.0
CARHR038570 Cardamine hirsuta HOM05D004222 ORTHO05D004982 3.8e-09 65.9 72 54.2
Nitab4.5_0018373g0020 Nicotiana tabacum HOM05D000428 ORTHO05D000582 4.2e-08 62.4 85 45.9
ECA238G1237 Erigeron canadensis HOM05D004222 ORTHO05D004982 4.6e-07 58.9 141 34.8
Cc01_g11080 Coffea canephora HOM05D004222 ORTHO05D154025 6.7e-06 55.1 100 40.0


User provided reference genes

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