Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19597 Utricularia gibba HOM05D005833 ORTHO05D008135 0.0e+00 1193.7 606 100.0
QL02p014018 Quercus lobata HOM05D005833 ORTHO05D008135 9.0e-140 501.5 612 45.9
Thecc.08G058300 Theobroma cacao HOM05D005833 ORTHO05D008135 1.5e-139 500.7 609 45.2
GSVIVG01008674001 Vitis vinifera HOM05D005833 ORTHO05D008135 2.6e-139 500.0 603 46.9
Migut.N03019 Erythranthe guttata HOM05D005833 ORTHO05D008135 9.9e-139 498.0 615 46.3
Actinidia17037 Actinidia chinensis HOM05D005833 ORTHO05D008135 1.7e-138 497.3 605 45.8
Dinv31936 Davidia involucrata HOM05D005833 ORTHO05D008135 1.9e-137 493.8 631 45.6
Rhsim06G0007700 Rhododendron simsii HOM05D005833 ORTHO05D008135 1.2e-136 491.1 623 45.1
Gohir.A01G106200 Gossypium hirsutum HOM05D005833 ORTHO05D008135 1.6e-136 490.7 622 44.9
Nitab4.5_0000588g0140 Nicotiana tabacum HOM05D005833 ORTHO05D008135 8.7e-135 485.0 615 44.7
Actinidia15488 Actinidia chinensis HOM05D005833 ORTHO05D008135 1.5e-134 484.2 604 45.7
Solyc04g082320.3 Solanum lycopersicum HOM05D005833 ORTHO05D008135 1.6e-133 480.7 608 44.6
Haze_22762 Corylus avellana HOM05D005833 ORTHO05D008135 2.1e-133 480.3 620 45.2
PGSC0003DMG400009977 Solanum tuberosum HOM05D005833 ORTHO05D008135 2.1e-133 480.3 615 44.7
Sopen04g035940 Solanum pennellii HOM05D005833 ORTHO05D008135 2.8e-133 479.9 608 45.1
Nn5g30935 Nelumbo nucifera HOM05D005833 ORTHO05D008135 6.2e-133 478.8 620 45.3
SGA_v2.0_scaffold225G43066 Striga asiatica HOM05D005833 ORTHO05D008135 1.1e-132 478.0 605 45.1
Sc02g0009090 Simmondsia chinensis HOM05D005833 ORTHO05D008135 6.9e-132 475.3 621 42.0
CAN.G311.113 Capsicum annuum HOM05D005833 ORTHO05D008135 7.6e-131 471.9 615 45.0
Peaxi162Scf00893g00432 Petunia axillaris HOM05D005833 ORTHO05D008135 1.7e-130 470.7 593 45.0
vmacro21814 Vaccinium macrocarpon HOM05D005833 ORTHO05D008135 1.4e-129 467.6 620 43.4
Cpa.g.sc26.202 Carica papaya HOM05D005833 ORTHO05D008135 9.3e-129 464.9 605 43.1
MSTRG.22056 Avicennia marina HOM05D005833 ORTHO05D008135 1.2e-128 464.5 615 44.6
CSS0049151 Camellia sinensis var. sinensis HOM05D005833 ORTHO05D008135 6.0e-128 462.2 595 44.5
MD08G1002500 Malus domestica HOM05D005833 ORTHO05D008135 7.9e-128 461.8 622 43.6
Gorai.002G118000 Gossypium raimondii HOM05D005833 ORTHO05D008135 1.3e-127 461.1 621 42.8
AL2G36360 Arabidopsis lyrata HOM05D005833 ORTHO05D008135 3.3e-126 456.4 608 43.1
TWI38G0766 Tripterygium wilfordii HOM05D005833 ORTHO05D008135 4.3e-126 456.1 619 43.6
Prupe.2G013700 Prunus persica HOM05D005833 ORTHO05D008135 7.4e-126 455.3 620 43.4
AUR62043177 Chenopodium quinoa HOM05D005833 ORTHO05D008135 9.6e-126 454.9 666 41.3
TAR381G0753 Trochodendron aralioides HOM05D005833 ORTHO05D008135 6.2e-125 452.2 665 41.4
arahy.Tifrunner.gnm1.ann1.5KXZ1H Arachis hypogaea HOM05D005833 ORTHO05D008135 8.1e-125 451.8 632 43.5
arahy.Tifrunner.gnm1.ann1.JP3Y8V Arachis hypogaea HOM05D005833 ORTHO05D008135 8.1e-125 451.8 632 43.5
MELO3C023645.2 Cucumis melo HOM05D005833 ORTHO05D008135 1.4e-124 451.1 619 43.8
VMungo0647G1167 Vigna mungo HOM05D005833 ORTHO05D008135 3.1e-124 449.9 591 44.7
Potri.001G047200 Populus trichocarpa HOM05D005833 ORTHO05D008135 5.3e-124 449.1 655 40.9
BraA07t31715Z Brassica rapa HOM05D005833 ORTHO05D008135 9.0e-124 448.4 603 43.3
CiPaw.12G008600 Carya illinoinensis HOM05D005833 ORTHO05D008135 9.0e-124 448.4 588 44.4
C06p50250 Brassica napus HOM05D005833 ORTHO05D008135 1.5e-123 447.6 618 42.4
BolC6t40064H Brassica oleracea HOM05D005833 ORTHO05D008135 1.5e-123 447.6 618 42.4
Psat6g000360 Pisum sativum HOM05D005833 ORTHO05D008135 2.0e-123 447.2 623 42.5
Phvul.001G001200 Phaseolus vulgaris HOM05D005833 ORTHO05D008135 2.6e-123 446.8 593 44.4
A07p41850 Brassica napus HOM05D005833 ORTHO05D008135 4.5e-123 446.0 603 43.1
CANSAT56G4366 Cannabis sativa HOM05D005833 ORTHO05D008135 1.3e-122 444.5 603 43.6
Thhalv10018138m.g Eutrema salsugineum HOM05D005833 ORTHO05D008135 3.8e-122 443.0 610 42.6
RcHm_v2.0_Chr6g0270441 Rosa chinensis HOM05D005833 ORTHO05D008135 1.1e-121 441.4 629 42.4
TPR.G6767 Trifolium pratense HOM05D005833 ORTHO05D008135 1.1e-121 441.4 625 42.9
Carub.0002s2317 Capsella rubella HOM05D005833 ORTHO05D008135 3.2e-121 439.9 627 41.3
CARHR069840 Cardamine hirsuta HOM05D005833 ORTHO05D008135 3.2e-121 439.9 596 42.3
Ca_25244_v3 Cicer arietinum L. HOM05D005833 ORTHO05D008135 3.2e-121 439.9 620 42.7
CsaV3_7G024400 Cucumis sativus L. HOM05D005833 ORTHO05D008135 3.2e-121 439.9 621 42.4
HanXRQChr14g0428311 Helianthus annuus HOM05D005833 ORTHO05D008135 4.2e-121 439.5 592 43.8
SHI22388 Sapria himalayana HOM05D005833 ORTHO05D008135 4.2e-121 439.5 595 43.9
Sp5g31420 Schrenkiella parvula HOM05D005833 ORTHO05D008135 7.1e-121 438.7 627 41.6
Aa31LG4G6370 Aethionema arabicum HOM05D005833 ORTHO05D008135 1.2e-120 438.0 620 42.3
Ah.11g041110 Amaranthus hybridus HOM05D005833 ORTHO05D008135 3.5e-120 436.4 615 42.6
Medtr6g069480 Medicago truncatula HOM05D005833 ORTHO05D008135 1.3e-119 434.5 619 42.5
MBI15_g24990_MAGBIO Magnolia biondii HOM05D005833 ORTHO05D008135 5.1e-119 432.6 722 38.2
EL10Ac1g01971 Beta vulgaris HOM05D005833 ORTHO05D008135 2.5e-118 430.3 623 41.3
THA.LOC104813754 Tarenaya hassleriana HOM05D005833 ORTHO05D008135 5.7e-118 429.1 610 42.0
Ciclev10004328m.g Citrus clementina HOM05D005833 ORTHO05D008135 7.4e-118 428.7 607 42.7
ClCG09G010280 Citrullus lanatus HOM05D005833 ORTHO05D008135 2.8e-117 426.8 614 42.0
Lalb_Chr19g0131751 Lupinus albus HOM05D005833 ORTHO05D008135 2.6e-115 420.2 631 41.5
Cc01_g04490 Coffea canephora HOM05D005833 ORTHO05D008135 3.4e-115 419.9 630 41.6
ECA238G3879 Erigeron canadensis HOM05D005833 ORTHO05D008135 1.0e-114 418.3 592 42.9
Eucgr.F01756 Eucalyptus grandis HOM05D005833 ORTHO05D008135 8.4e-114 415.2 614 41.9
Manes.01G079700 Manihot esculenta HOM05D005833 ORTHO05D008135 1.4e-113 414.5 617 39.9
Hma1.2p1_1100F.1_g257060 Hydrangea macrophylla HOM05D005833 ORTHO05D008135 1.9e-113 414.1 621 40.9
Lj2g0014489 Lotus japonicus HOM05D005833 ORTHO05D008135 1.9e-113 414.1 638 39.8
Sabra01G0032600 Salix brachista HOM05D005833 ORTHO05D008135 1.9e-113 414.1 690 37.8
FAN27G2717 Fragaria x ananassa HOM05D005833 ORTHO05D008135 2.7e-112 410.2 625 41.3
Zm00001eb315840 Zea mays HOM05D005833 ORTHO05D008135 4.6e-112 409.5 622 40.2
HPP92_008490 Vanilla planifolia HOM05D005833 ORTHO05D008135 5.7e-110 402.5 694 37.0
RcHm_v2.0_Chr6g0304231 Rosa chinensis HOM05D005833 ORTHO05D008135 6.3e-109 399.1 629 40.5
FvH4_2g37510 Fragaria vesca HOM05D005833 ORTHO05D008135 1.1e-108 398.3 628 41.1
Lsat_1_v5_gn_2_5021 Lactuca sativa HOM05D005833 ORTHO05D008135 5.3e-108 396.0 607 39.5
FAN20G1756 Fragaria x ananassa HOM05D005833 ORTHO05D008135 5.9e-107 392.5 626 40.6
ATR0691G240 Amborella trichopoda HOM05D005833 ORTHO05D008135 7.9e-104 382.1 477 43.8
PSO541G2949 Papaver somniferum HOM05D005833 ORTHO05D008135 2.3e-103 380.6 660 36.5
CDE09G0025 Ceratophyllum demersum HOM05D005833 ORTHO05D008135 5.1e-103 379.4 691 36.5
Lj8C590T1 Lonicera japonica HOM05D005833 ORTHO05D008135 8.8e-103 378.6 554 40.1
Glyma.14G223300 Glycine max HOM05D005833 ORTHO05D008135 1.5e-102 377.9 618 39.3
Hma1.2p1_1100F.1_g257040 Hydrangea macrophylla HOM05D005833 ORTHO05D008135 5.9e-99 365.9 438 46.3
FAN15G1206 Fragaria x ananassa HOM05D005833 ORTHO05D008135 2.9e-98 363.6 620 38.4
BcaNung02801 Brassica carinata HOM05D005833 ORTHO05D008135 1.3e-93 348.2 594 38.6
PSO675G2737 Papaver somniferum HOM05D005833 ORTHO05D008135 7.0e-92 342.4 659 34.9
AT1G76280 Arabidopsis thaliana HOM05D005833 ORTHO05D008135 2.6e-91 340.5 416 45.2
Aqoxy6G01299 Aquilegia oxysepala HOM05D005833 ORTHO05D008135 5.9e-91 339.3 662 35.0
BcaC08g47270 Brassica carinata HOM05D005833 ORTHO05D008135 2.9e-90 337.0 493 41.4
Sed0015348 Sechium edule HOM05D005833 ORTHO05D008135 1.5e-86 324.7 441 42.6
PGR083G0966 Punica granatum HOM05D005833 ORTHO05D008135 1.3e-85 321.6 628 33.8
SEGI_05799 Sequoiadendron giganteum HOM05D005833 ORTHO05D008135 3.1e-84 317.0 478 38.1
SalBow6G3625 Salvia bowleyana HOM05D005833 ORTHO05D008135 1.3e-82 311.6 390 45.9
DCAR_009531 Daucus carota HOM05D004428 ORTHO05D006381 2.9e-82 310.5 440 40.0
Gohir.D01G092700 Gossypium hirsutum HOM05D005833 ORTHO05D008135 3.8e-82 310.1 385 44.9
TPR.G8628 Trifolium pratense HOM05D005833 ORTHO05D008135 2.0e-75 287.7 356 45.5
BcaC09g51226 Brassica carinata HOM05D005833 ORTHO05D008135 7.3e-65 252.7 524 34.2
AUR62036881 Chenopodium quinoa HOM05D005833 ORTHO05D008135 1.8e-63 248.1 350 43.1
Glyma.14G222150 Glycine max HOM05D005833 ORTHO05D008135 6.8e-47 193.0 198 52.0
BcaC08g47127 Brassica carinata HOM05D005833 ORTHO05D008135 1.5e-46 191.8 285 40.0
CAN.G643.17 Capsicum annuum HOM05D005833 ORTHO05D008135 8.3e-45 186.0 399 34.3
BcaC08g47126 Brassica carinata HOM05D005833 ORTHO05D008135 3.5e-43 180.6 249 42.6
COL.COLO4_04005 Corchorus olitorius HOM05D005833 ORTHO05D008135 8.9e-39 166.0 328 33.5
Lj8P589T22 Lonicera japonica HOM05D005833 ORTHO05D008135 1.1e-33 149.1 163 47.2
TPR.G8631 Trifolium pratense HOM05D005833 ORTHO05D008135 6.2e-32 143.3 262 37.0
Nitab4.5_0000198g0010 Nicotiana tabacum HOM05D005833 ORTHO05D008135 4.0e-31 140.6 150 52.7
AagrBONN_evm.TU.Sc2ySwM_117.1478 Anthoceros agrestis HOM05D005833 ORTHO05D008135 5.8e-30 136.7 261 33.0
Oeu011332.1 Olea europaea HOM05D005833 ORTHO05D008135 3.8e-29 134.0 145 50.3
Oeu011333.1 Olea europaea HOM05D005833 ORTHO05D008135 3.8e-29 134.0 145 50.3
CBR_g11913 Chara braunii HOM05D005833 ORTHO05D008135 3.2e-28 131.0 275 29.8
SMO230G0024 Selaginella moellendorffii HOM05D005833 ORTHO05D008135 6.0e-27 126.7 399 25.3
Medtr1g026480 Medicago truncatula HOM05D005833 ORTHO05D008135 5.3e-23 113.6 145 45.5
Medtr1g026340 Medicago truncatula HOM05D005833 ORTHO05D008135 2.4e-20 104.8 118 46.6
Medtr1g026460 Medicago truncatula HOM05D005833 ORTHO05D008135 2.4e-20 104.8 118 46.6
Mapoly0009s0070 Marchantia polymorpha HOM05D005833 ORTHO05D008135 2.7e-19 101.3 165 36.4
Pp3c11_2930 Physcomitrium patens HOM05D005833 ORTHO05D008135 1.9e-17 95.1 445 22.5
BcaC08g47271 Brassica carinata HOM05D005833 ORTHO05D008135 2.5e-17 94.7 118 45.8
DCAR_009530 Daucus carota HOM05D005833 ORTHO05D008135 1.3e-16 92.4 117 42.7
COL.COLO4_31427 Corchorus olitorius HOM05D000001 ORTHO05D000003 3.7e-08 64.3 149 27.5
AagrBONN_evm.TU.Sc2ySwM_344.5491 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.4e-07 62.4 297 23.9
AagrBONN_evm.TU.Sc2ySwM_117.1045 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.0e-07 60.8 394 22.6
AagrBONN_evm.TU.Sc2ySwM_368.700 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.0e-07 60.8 398 21.6
ClCG02G014130 Citrullus lanatus HOM05D000001 ORTHO05D000003 4.0e-07 60.8 395 19.7
QL05p040361 Quercus lobata HOM05D000001 ORTHO05D000003 4.0e-07 60.8 385 21.6
VMungo1080G0296 Vigna mungo HOM05D000001 ORTHO05D000003 4.0e-07 60.8 472 21.2
BcaB05g24986 Brassica carinata HOM05D005833 ORTHO05D008135 5.3e-07 60.5 68 48.5
Dinv40595 Davidia involucrata HOM05D000001 ORTHO05D000003 5.3e-07 60.5 363 20.7
AagrBONN_evm.TU.Sc2ySwM_228.457 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.0e-07 59.7 384 22.4
Cfa008394 Carpinus fangiana HOM05D000001 ORTHO05D000003 2.0e-06 58.5 353 22.9
Potri.001G459900 Populus trichocarpa HOM05D002785 ORTHO05D003042 2.0e-06 58.5 203 25.1
Duzib235G1222 Durio zibethinus HOM05D000001 ORTHO05D000003 2.6e-06 58.2 149 26.8
HanXRQChr12g0380171 Helianthus annuus HOM05D000001 ORTHO05D000003 2.6e-06 58.2 379 19.3
Glyma.12G183600 Glycine max HOM05D000001 ORTHO05D000003 3.4e-06 57.8 274 22.3
AagrBONN_evm.TU.Sc2ySwM_368.1090 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.5e-06 57.4 391 19.4
CiPaw.10G023600 Carya illinoinensis HOM05D000001 ORTHO05D000003 4.5e-06 57.4 163 24.5
Cc01_g09430 Coffea canephora HOM05D000001 ORTHO05D000003 4.5e-06 57.4 377 19.6
MBI01_g15492_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009667 4.5e-06 57.4 400 24.0
Rhsim03G0202600 Rhododendron simsii HOM05D000001 ORTHO05D000003 4.5e-06 57.4 398 21.4
ClCG09G002080 Citrullus lanatus HOM05D000001 ORTHO05D000003 5.8e-06 57.0 374 21.4
ClCG01G008850 Citrullus lanatus HOM05D002785 ORTHO05D003042 7.6e-06 56.6 201 27.4
MBI14_g25347_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 7.6e-06 56.6 201 24.4
MD16G1061200 Malus domestica HOM05D005706 ORTHO05D007474 1.0e-05 56.2 203 22.7


User provided reference genes

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