Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19385 Utricularia gibba HOM05D001476 ORTHO05D006149 0.0e+00 1516.1 765 100.0
Migut.J00228 Erythranthe guttata HOM05D001476 ORTHO05D006149 0.0e+00 1211.1 867 73.1
Dinv35515 Davidia involucrata HOM05D001476 ORTHO05D006149 0.0e+00 1185.2 847 73.2
SGA_v2.0_scaffold85G26765 Striga asiatica HOM05D001476 ORTHO05D006149 0.0e+00 1181.0 860 72.9
SGA_v2.0_scaffold22G09908 Striga asiatica HOM05D001476 ORTHO05D006149 0.0e+00 1180.2 858 71.8
Hma1.2p1_0763F.1_g214610 Hydrangea macrophylla HOM05D001476 ORTHO05D006149 0.0e+00 1171.4 856 71.4
CSS0024803 Camellia sinensis var. sinensis HOM05D001476 ORTHO05D006149 0.0e+00 1160.2 839 71.6
SalBow5G4659 Salvia bowleyana HOM05D001476 ORTHO05D006149 0.0e+00 1160.2 922 67.2
Actinidia13780 Actinidia chinensis HOM05D001476 ORTHO05D006149 0.0e+00 1157.5 844 71.9
Cc06_g01690 Coffea canephora HOM05D001476 ORTHO05D006149 0.0e+00 1156.7 859 69.4
Nn2g13602 Nelumbo nucifera HOM05D001476 ORTHO05D006149 0.0e+00 1147.9 830 71.7
Nitab4.5_0000008g0700 Nicotiana tabacum HOM05D001476 ORTHO05D006149 0.0e+00 1138.3 862 69.5
Nitab4.5_0011723g0020 Nicotiana tabacum HOM05D001476 ORTHO05D006149 0.0e+00 1133.6 862 69.3
Gohir.D09G158600 Gossypium hirsutum HOM05D001476 ORTHO05D006149 0.0e+00 1132.9 841 69.7
Gorai.006G180300 Gossypium raimondii HOM05D001476 ORTHO05D006149 0.0e+00 1132.5 855 69.1
Rhsim05G0205700 Rhododendron simsii HOM05D001476 ORTHO05D006149 0.0e+00 1132.1 841 70.7
GSVIVG01034014001 Vitis vinifera HOM05D001476 ORTHO05D006149 0.0e+00 1130.5 823 71.6
Gohir.A09G163100 Gossypium hirsutum HOM05D001476 ORTHO05D006149 0.0e+00 1129.4 846 69.4
TAR402G0001 Trochodendron aralioides HOM05D001476 ORTHO05D006149 0.0e+00 1128.6 846 70.2
Thecc.05G022500 Theobroma cacao HOM05D001476 ORTHO05D006149 0.0e+00 1128.2 843 69.9
Duzib128G0639 Durio zibethinus HOM05D001476 ORTHO05D006149 0.0e+00 1127.5 835 69.7
PGR031G2805 Punica granatum HOM05D001476 ORTHO05D006149 0.0e+00 1126.7 838 69.7
Manes.09G101900 Manihot esculenta HOM05D001476 ORTHO05D006149 0.0e+00 1124.8 855 68.8
Potri.016G110800 Populus trichocarpa HOM05D001476 ORTHO05D006149 0.0e+00 1124.4 868 68.5
TWI74G1595 Tripterygium wilfordii HOM05D001476 ORTHO05D006149 0.0e+00 1124.4 855 68.4
Potri.006G096100 Populus trichocarpa HOM05D001476 ORTHO05D006149 0.0e+00 1119.8 868 68.3
Gorai.012G111700 Gossypium raimondii HOM05D001476 ORTHO05D006149 0.0e+00 1119.0 835 69.6
MELO3C003223.2 Cucumis melo HOM05D001476 ORTHO05D006149 0.0e+00 1118.2 851 68.6
PSO210G1670 Papaver somniferum HOM05D001476 ORTHO05D006149 0.0e+00 1117.1 852 69.6
HanXRQChr16g0507821 Helianthus annuus HOM05D001476 ORTHO05D006149 0.0e+00 1116.7 861 67.7
Solyc09g013130.3 Solanum lycopersicum HOM05D001476 ORTHO05D006149 0.0e+00 1114.8 886 66.4
Sopen10g034520 Solanum pennellii HOM05D001476 ORTHO05D006149 0.0e+00 1114.8 865 68.6
Prupe.6G270500 Prunus persica HOM05D001476 ORTHO05D006149 0.0e+00 1114.4 873 67.6
Oeu004614.2 Olea europaea HOM05D001476 ORTHO05D006149 0.0e+00 1113.2 866 68.1
Ciclev10011050m.g Citrus clementina HOM05D001476 ORTHO05D006149 0.0e+00 1111.7 831 69.2
CsaV3_4G025980 Cucumis sativus L. HOM05D001476 ORTHO05D006149 0.0e+00 1111.7 851 68.6
Aqoxy1G00720 Aquilegia oxysepala HOM05D001476 ORTHO05D006149 0.0e+00 1110.1 835 69.0
ClCG04G007260 Citrullus lanatus HOM05D001476 ORTHO05D006149 0.0e+00 1109.4 856 68.2
CAN.G355.19 Capsicum annuum HOM05D001476 ORTHO05D006149 0.0e+00 1108.6 865 67.4
Cpa.g.sc56.111 Carica papaya HOM05D001476 ORTHO05D006149 0.0e+00 1108.6 861 67.5
ECA236G3430 Erigeron canadensis HOM05D001476 ORTHO05D006149 0.0e+00 1108.2 819 69.4
Nitab4.5_0004912g0100 Nicotiana tabacum HOM05D001476 ORTHO05D006149 0.0e+00 1107.4 866 68.1
PSO832G0213 Papaver somniferum HOM05D001476 ORTHO05D006149 0.0e+00 1107.4 851 69.1
Sc24g0002110 Simmondsia chinensis HOM05D001476 ORTHO05D006149 0.0e+00 1107.0 892 65.6
TWI77G0827 Tripterygium wilfordii HOM05D001476 ORTHO05D006149 0.0e+00 1106.7 887 66.0
Lj3g0014893 Lotus japonicus HOM05D001476 ORTHO05D006149 0.0e+00 1106.3 838 68.1
Eucgr.B02781 Eucalyptus grandis HOM05D001476 ORTHO05D006149 0.0e+00 1105.5 853 68.1
Gohir.D04G128600 Gossypium hirsutum HOM05D001476 ORTHO05D006149 0.0e+00 1103.6 835 69.1
FvH4_6g12060 Fragaria vesca HOM05D001476 ORTHO05D006149 0.0e+00 1100.5 867 67.1
Sopen09g006990 Solanum pennellii HOM05D001476 ORTHO05D006149 0.0e+00 1100.1 886 65.9
Sed0003764 Sechium edule HOM05D001476 ORTHO05D006149 0.0e+00 1097.4 829 69.0
PGSC0003DMG400011017 Solanum tuberosum HOM05D001476 ORTHO05D006149 0.0e+00 1097.0 865 68.3
Peaxi162Scf00141g00813 Petunia axillaris HOM05D001476 ORTHO05D006149 0.0e+00 1092.8 808 70.0
Thhalv10020022m.g Eutrema salsugineum HOM05D001476 ORTHO05D006149 0.0e+00 1092.0 891 65.1
Peaxi162Scf00009g02022 Petunia axillaris HOM05D001476 ORTHO05D006149 0.0e+00 1092.0 869 67.1
CANSAT35G0098 Cannabis sativa HOM05D001476 ORTHO05D006149 0.0e+00 1091.6 852 67.5
CARHR083470 Cardamine hirsuta HOM05D001476 ORTHO05D006149 0.0e+00 1091.3 897 64.4
Sp3g07550 Schrenkiella parvula HOM05D001476 ORTHO05D006149 0.0e+00 1090.9 885 65.5
DCAR_024038 Daucus carota HOM05D001476 ORTHO05D006149 0.0e+00 1090.5 840 68.3
THA.LOC104816221 Tarenaya hassleriana HOM05D001476 ORTHO05D006149 0.0e+00 1088.6 924 63.7
AT3G09090 Arabidopsis thaliana HOM05D001476 ORTHO05D006149 0.0e+00 1085.5 896 64.7
Ca_23816_v3 Cicer arietinum L. HOM05D001476 ORTHO05D006149 0.0e+00 1085.5 841 67.1
Atru.chr8.2151 Acer truncatum HOM05D001476 ORTHO05D006149 0.0e+00 1082.4 914 63.7
Carub.0003s0826 Capsella rubella HOM05D001476 ORTHO05D006149 0.0e+00 1080.1 896 64.3
AL3G20170 Arabidopsis lyrata HOM05D001476 ORTHO05D006149 0.0e+00 1079.7 902 64.3
Glyma.01G111300 Glycine max HOM05D001476 ORTHO05D006149 0.0e+00 1075.5 864 66.1
EL10Ac5g11563 Beta vulgaris HOM05D001476 ORTHO05D006149 5.2e-312 1074.7 901 63.7
Haze_20947 Corylus avellana HOM05D001476 ORTHO05D006149 5.2e-312 1074.7 898 64.1
BcaC09g48009 Brassica carinata HOM05D001476 ORTHO05D006149 5.2e-312 1073.9 893 64.1
CiPaw.09G205700 Carya illinoinensis HOM05D001476 ORTHO05D006149 1.8e-310 1068.9 869 65.4
Glyma.03G076900 Glycine max HOM05D001476 ORTHO05D006149 3.0e-310 1068.1 880 64.8
Nitab4.5_0000652g0160 Nicotiana tabacum HOM05D001476 ORTHO05D006149 3.0e-310 1068.1 819 69.0
BolC1t05473H Brassica oleracea HOM05D001476 ORTHO05D006149 1.2e-309 1066.2 902 63.3
Sed0007041 Sechium edule HOM05D001476 ORTHO05D006149 5.7e-309 1063.9 894 63.4
Medtr4g014960 Medicago truncatula HOM05D001476 ORTHO05D006149 7.5e-309 1063.5 876 65.0
FAN05G2912 Fragaria x ananassa HOM05D001476 ORTHO05D006149 2.2e-308 1062.0 867 65.5
BcaC09g48054 Brassica carinata HOM05D001476 ORTHO05D006149 1.4e-307 1059.3 896 63.2
Aa31LG3G1620 Aethionema arabicum HOM05D001476 ORTHO05D006149 2.4e-307 1058.5 906 62.7
A05p39780 Brassica napus HOM05D001476 ORTHO05D006149 2.7e-306 1055.0 903 63.2
PGSC0003DMG400020350 Solanum tuberosum HOM05D001476 ORTHO05D006149 3.5e-306 1054.7 995 58.0
FAN09G2729 Fragaria x ananassa HOM05D001476 ORTHO05D006149 7.7e-306 1053.5 882 64.6
Rhsim05G0205800 Rhododendron simsii HOM05D001476 ORTHO05D006149 1.0e-305 1053.1 891 62.7
FAN02G1993 Fragaria x ananassa HOM05D001476 ORTHO05D006149 1.3e-305 1052.7 867 65.2
FAN14G1008 Fragaria x ananassa HOM05D001476 ORTHO05D006149 2.2e-305 1052.0 882 64.6
FAN14G2619 Fragaria x ananassa HOM05D001476 ORTHO05D006149 3.8e-305 1051.2 882 64.6
Lj3A957T35 Lonicera japonica HOM05D001476 ORTHO05D006149 5.0e-305 1050.8 927 61.7
C05p58820 Brassica napus HOM05D001476 ORTHO05D006149 8.5e-305 1050.0 905 62.8
MD04G1146700 Malus domestica HOM05D001476 ORTHO05D006149 1.5e-304 1049.3 860 66.3
Psat0s2261g0240 Pisum sativum HOM05D001476 ORTHO05D006149 1.9e-304 1048.9 887 63.5
VMungo0331G0441 Vigna mungo HOM05D001476 ORTHO05D006149 7.2e-304 1047.0 874 63.5
MD12G1159900 Malus domestica HOM05D001476 ORTHO05D006149 1.2e-303 1046.2 881 64.8
BraA05t22762Z Brassica rapa HOM05D001476 ORTHO05D006149 2.1e-303 1045.4 919 62.0
HPP92_018041 Vanilla planifolia HOM05D001476 ORTHO05D006149 2.7e-303 1045.0 845 64.4
ATR0618G171 Amborella trichopoda HOM05D001476 ORTHO05D006149 8.0e-303 1043.5 793 67.6
Phvul.010G008300 Phaseolus vulgaris HOM05D001476 ORTHO05D006149 2.6e-301 1038.5 926 60.7
BraA01t04314Z Brassica rapa HOM05D001476 ORTHO05D006149 3.4e-301 1038.1 902 62.7
TPR.G5272 Trifolium pratense HOM05D001476 ORTHO05D006149 7.5e-301 1036.9 867 63.6
Lsat_1_v5_gn_8_99901 Lactuca sativa HOM05D001476 ORTHO05D006149 9.8e-301 1036.6 802 67.1
CDE04G3748 Ceratophyllum demersum HOM05D001476 ORTHO05D006149 1.3e-300 1036.2 836 65.6
Duzib106G0695 Durio zibethinus HOM05D001476 ORTHO05D006149 2.8e-295 1018.5 800 66.0
Oeu044363.1 Olea europaea HOM05D001476 ORTHO05D006149 3.6e-295 1018.1 807 68.2
Zm00001eb063130 Zea mays HOM05D001476 ORTHO05D006149 1.8e-294 1015.8 837 62.7
arahy.Tifrunner.gnm1.ann1.VBIR99 Arachis hypogaea HOM05D001476 ORTHO05D006149 2.8e-292 1008.4 897 61.6
vmacro20235 Vaccinium macrocarpon HOM05D001476 ORTHO05D006149 1.4e-291 1006.1 837 63.9
BcaC05g29640 Brassica carinata HOM05D001476 ORTHO05D006149 2.4e-291 1005.4 890 61.5
arahy.Tifrunner.gnm1.ann1.5UT5JQ Arachis hypogaea HOM05D001476 ORTHO05D006149 9.2e-291 1003.4 897 61.3
Lalb_Chr07g0193321 Lupinus albus HOM05D001476 ORTHO05D006149 4.5e-290 1001.1 945 58.4
Os03g0825700 Oryza sativa ssp. japonica HOM05D001476 ORTHO05D006149 1.7e-289 999.2 826 64.8
Cfa017258 Carpinus fangiana HOM05D001476 ORTHO05D002681 2.1e-287 992.3 836 63.6
Gohir.A04G088225 Gossypium hirsutum HOM05D001476 ORTHO05D006149 3.0e-281 971.8 731 67.4
CDE03G0023 Ceratophyllum demersum HOM05D001476 ORTHO05D006149 1.5e-280 969.5 845 60.0
MSTRG.5600 Avicennia marina HOM05D001476 ORTHO05D006149 5.6e-264 914.4 688 71.5
Sabra06G0073800 Salix brachista HOM05D001476 ORTHO05D002681 2.6e-261 905.6 815 61.8
Pp3c20_710 Physcomitrium patens HOM05D001476 ORTHO05D006149 1.7e-260 902.9 793 57.8
Solyc10g085060.3 Solanum lycopersicum HOM05D001476 ORTHO05D006149 8.4e-260 900.6 709 66.7
Ah.11g045320 Amaranthus hybridus HOM05D001476 ORTHO05D006149 1.0e-257 893.6 888 57.1
Lsat_1_v5_gn_0_44361 Lactuca sativa HOM05D001476 ORTHO05D006149 9.3e-251 870.5 693 63.8
Sabra16G0107400 Salix brachista HOM05D001476 ORTHO05D006149 6.2e-247 857.8 933 53.7
CAN.G1297.2 Capsicum annuum HOM05D001476 ORTHO05D006149 1.1e-246 857.1 592 73.0
Mapoly0103s0063 Marchantia polymorpha HOM05D001476 ORTHO05D006149 3.8e-244 848.6 872 53.4
RcHm_v2.0_Chr3g0463911 Rosa chinensis HOM05D001476 ORTHO05D006149 3.1e-238 828.9 691 65.4
SMO145G0033 Selaginella moellendorffii HOM05D001476 ORTHO05D006149 2.5e-235 819.3 838 51.8
TAR636G2437 Trochodendron aralioides HOM05D001476 ORTHO05D006149 1.3e-231 807.0 503 77.1
SEGI_02222 Sequoiadendron giganteum HOM05D001476 ORTHO05D006149 2.0e-213 746.5 680 59.6
AagrBONN_evm.TU.Sc2ySwM_369.563 Anthoceros agrestis HOM05D001476 ORTHO05D006149 2.9e-175 619.8 588 58.0
AUR62043525 Chenopodium quinoa HOM05D001476 ORTHO05D006149 8.3e-175 618.2 382 77.2
TPR.G6686 Trifolium pratense HOM05D001476 ORTHO05D006149 3.5e-173 612.8 372 78.0
AUR62044509 Chenopodium quinoa HOM05D001476 ORTHO05D006149 2.2e-167 593.6 339 81.4
COL.COLO4_14599 Corchorus olitorius HOM05D001476 ORTHO05D006149 3.5e-165 586.3 350 80.0
AUR62043103 Chenopodium quinoa HOM05D001476 ORTHO05D006149 5.0e-164 582.4 359 76.9
SHI12782 Sapria himalayana HOM05D001476 ORTHO05D006149 5.2e-145 519.2 512 59.0
vmacro17486 Vaccinium macrocarpon HOM05D001476 ORTHO05D006149 1.9e-139 500.7 462 61.0
MCO10G178 Micromonas commoda HOM05D001476 ORTHO05D006149 6.4e-135 485.7 827 37.1
AUR62043102 Chenopodium quinoa HOM05D001476 ORTHO05D006149 8.4e-127 458.8 509 53.4
SHI12784 Sapria himalayana HOM05D001476 ORTHO05D006149 3.5e-125 453.4 305 73.4
CBR_g8542 Chara braunii HOM05D001476 ORTHO05D006149 1.9e-123 447.6 718 40.0
Cre04.g214097 Chlamydomonas reinhardtii HOM05D001476 ORTHO05D006149 1.6e-122 444.5 987 33.7
BcaC09g47968 Brassica carinata HOM05D001476 ORTHO05D006149 1.3e-106 391.7 297 66.7
AUR62043524 Chenopodium quinoa HOM05D001476 ORTHO05D006149 7.4e-99 365.9 443 51.5
COL.COLO4_14600 Corchorus olitorius HOM05D001476 ORTHO05D006149 1.1e-94 352.1 433 51.7
Actinidia29132 Actinidia chinensis HOM05D001476 ORTHO05D006149 4.8e-90 336.7 543 41.1
PRCOL_00002974 Prasinoderma coloniale HOM05D001476 ORTHO05D006149 9.1e-89 332.4 1028 27.8
TAR636G0462 Trochodendron aralioides HOM05D001476 ORTHO05D006149 2.7e-72 277.7 316 57.3
RcHm_v2.0_Chr3g0463901 Rosa chinensis HOM05D001476 ORTHO05D006149 2.9e-71 274.2 165 77.0
BolC5t34534H Brassica oleracea HOM05D001476 ORTHO05D002681 1.6e-45 188.7 150 74.0
Hund31411 Selenicereus undatus HOM05D001476 ORTHO05D006149 6.4e-42 176.8 102 78.4
MSTRG.19033 Avicennia marina HOM05D001476 ORTHO05D031643 5.4e-41 173.7 115 79.1
Dinv37085 Davidia involucrata HOM05D001476 ORTHO05D002681 8.6e-39 166.4 285 40.7
vmacro17485 Vaccinium macrocarpon HOM05D001476 ORTHO05D006149 1.8e-36 158.7 104 72.1
SEGI_09667 Sequoiadendron giganteum HOM05D001476 ORTHO05D006149 1.5e-35 155.6 106 66.0
FAN23G1187 Fragaria x ananassa HOM05D001476 ORTHO05D031643 3.4e-19 101.3 64 75.0
Rhsim09G0090000 Rhododendron simsii HOM05D001476 ORTHO05D034934 4.5e-19 100.9 77 66.2
TAR629G0215 Trochodendron aralioides HOM05D000393 ORTHO05D000275 4.9e-18 97.4 61 77.0
FAN03G3278 Fragaria x ananassa HOM05D004221 ORTHO05D004998 4.8e-13 80.9 72 56.9
TAR626G1231 Trochodendron aralioides HOM05D000393 ORTHO05D000275 5.3e-12 77.4 57 64.9
FAN19G0609 Fragaria x ananassa HOM05D014108 ORTHO05D015280 1.2e-11 76.3 72 55.6
GSVIVG01021923001 Vitis vinifera HOM05D001476 ORTHO05D006149 2.0e-11 75.5 66 51.5
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.8e-11 73.9 91 46.2
TAR636G0366 Trochodendron aralioides HOM05D001476 ORTHO05D006149 1.3e-10 72.8 53 67.9
MELO3C011527.2 Cucumis melo HOM05D001476 ORTHO05D034934 1.2e-08 66.2 41 70.7
TAR381G0471 Trochodendron aralioides HOM05D000141 ORTHO05D000780 1.2e-08 66.2 98 50.0
Rhsim05G0112000 Rhododendron simsii HOM05D047264 ORTHO05D021376 6.0e-08 63.9 58 56.9
TWI53G1805 Tripterygium wilfordii HOM05D001476 ORTHO05D031643 6.7e-07 60.5 52 59.6
Rhsim06G0121600 Rhododendron simsii HOM05D001476 ORTHO05D034934 4.3e-06 57.8 47 63.8


User provided reference genes

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