Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23876 Utricularia gibba HOM05D000561 ORTHO05D021076 1.4e-62 242.7 113 100.0
SGA_v2.0_scaffold247G44873 Striga asiatica HOM05D000561 ORTHO05D000514 6.6e-12 74.3 60 53.3
MSTRG.21383 Avicennia marina HOM05D000561 ORTHO05D000514 1.5e-11 73.2 43 69.8
Migut.D00595 Erythranthe guttata HOM05D000561 ORTHO05D000514 5.6e-11 71.2 39 71.8
SalBow2G0499 Salvia bowleyana HOM05D000561 ORTHO05D000514 5.6e-11 71.2 43 65.1
SalBow6G1629 Salvia bowleyana HOM05D000561 ORTHO05D000514 5.6e-11 71.2 43 65.1
Lj1A337T22 Lonicera japonica HOM05D000561 ORTHO05D001339 4.7e-10 68.2 58 53.4
Oeu001477.2 Olea europaea HOM05D000003 ORTHO05D000514 1.4e-09 66.6 38 68.4
Solyc11g065880.2 Solanum lycopersicum HOM05D000561 ORTHO05D000514 3.1e-09 65.5 38 68.4
Sopen11g025610 Solanum pennellii HOM05D000561 ORTHO05D000514 3.1e-09 65.5 38 68.4
PGSC0003DMG400007361 Solanum tuberosum HOM05D000561 ORTHO05D000514 3.1e-09 65.5 38 68.4
Zm00001eb005630 Zea mays HOM05D000561 ORTHO05D000514 8.9e-09 63.9 42 61.9
Peaxi162Scf01398g00012 Petunia axillaris HOM05D000561 ORTHO05D000514 1.2e-08 63.5 38 65.8
Nitab4.5_0005819g0030 Nicotiana tabacum HOM05D000561 ORTHO05D000514 2.6e-08 62.4 38 65.8
Nitab4.5_0006994g0030 Nicotiana tabacum HOM05D000561 ORTHO05D000514 2.6e-08 62.4 38 65.8
GSVIVG01025280001 Vitis vinifera HOM05D000561 ORTHO05D000514 3.4e-08 62.0 51 52.9
Cc02_g33880 Coffea canephora HOM05D000561 ORTHO05D000514 4.4e-08 61.6 42 59.5
Nn2g15468 Nelumbo nucifera HOM05D000561 ORTHO05D000514 5.8e-08 61.2 44 59.1
Cpa.g.sc84.66 Carica papaya HOM05D000561 ORTHO05D000514 7.5e-08 60.8 37 67.6
Medtr2g097960 Medicago truncatula HOM05D000561 ORTHO05D000514 7.5e-08 60.8 41 63.4
Os03g0174100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D000514 7.5e-08 60.8 41 58.5
Psat5g286480 Pisum sativum HOM05D000561 ORTHO05D000514 7.5e-08 60.8 41 61.0
Lj6g0011746 Lotus japonicus HOM05D000561 ORTHO05D000514 9.9e-08 60.5 58 44.8
Manes.14G001900 Manihot esculenta HOM05D000561 ORTHO05D000514 1.7e-07 59.7 44 59.1
QL01p004975 Quercus lobata HOM05D000561 ORTHO05D000514 2.2e-07 59.3 54 48.1
SMO169G0223 Selaginella moellendorffii HOM05D000561 ORTHO05D000514 2.2e-07 59.3 37 64.9
Haze_23125 Corylus avellana HOM05D000561 ORTHO05D000514 2.9e-07 58.9 64 40.6
PSO384G1656 Papaver somniferum HOM05D000561 ORTHO05D000514 2.9e-07 58.9 38 65.8
Cfa009761 Carpinus fangiana HOM05D000561 ORTHO05D000514 3.7e-07 58.5 37 64.9
Ciclev10015576m.g Citrus clementina HOM05D000561 ORTHO05D000514 3.7e-07 58.5 37 64.9
ECA248G2811 Erigeron canadensis HOM05D000561 ORTHO05D000514 3.7e-07 58.5 38 63.2
Lalb_Chr07g0177291 Lupinus albus HOM05D000561 ORTHO05D000514 3.7e-07 58.5 41 61.0
Potri.009G054400 Populus trichocarpa HOM05D000561 ORTHO05D000514 4.9e-07 58.2 37 64.9
Sabra09G0039700 Salix brachista HOM05D000561 ORTHO05D000514 4.9e-07 58.2 37 64.9
TPR.G6890 Trifolium pratense HOM05D000561 ORTHO05D000514 4.9e-07 58.2 40 60.0
CSS0034072 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 6.4e-07 57.8 40 57.5
THA.LOC104811163 Tarenaya hassleriana HOM05D000561 ORTHO05D000514 6.4e-07 57.8 37 59.5
Actinidia06900 Actinidia chinensis HOM05D000561 ORTHO05D021076 8.3e-07 57.4 38 60.5
Actinidia16326 Actinidia chinensis HOM05D000561 ORTHO05D000514 8.3e-07 57.4 38 60.5
Aa31LG11G5050 Aethionema arabicum HOM05D000561 ORTHO05D000514 8.3e-07 57.4 37 62.2
AL1G22780 Arabidopsis lyrata HOM05D000561 ORTHO05D000514 8.3e-07 57.4 40 60.0
AL6G30840 Arabidopsis lyrata HOM05D000561 ORTHO05D000514 8.3e-07 57.4 37 62.2
AT5G19350 Arabidopsis thaliana HOM05D000561 ORTHO05D000514 8.3e-07 57.4 37 62.2
A03p09450 Brassica napus HOM05D000561 ORTHO05D000514 8.3e-07 57.4 37 62.2
CARHR193610 Cardamine hirsuta HOM05D000561 ORTHO05D000514 8.3e-07 57.4 37 62.2
Ca_01295_v3 Cicer arietinum L. HOM05D000561 ORTHO05D000514 8.3e-07 57.4 41 58.5
Glyma.13G205600 Glycine max HOM05D000561 ORTHO05D000514 8.3e-07 57.4 38 63.2
Sp6g25060 Schrenkiella parvula HOM05D000561 ORTHO05D000514 8.3e-07 57.4 37 62.2
Aqoxy1G00237 Aquilegia oxysepala HOM05D000561 ORTHO05D000514 1.1e-06 57.0 37 64.9
BcaB01g05142 Brassica carinata HOM05D000561 ORTHO05D000514 1.1e-06 57.0 37 62.2
BcaC04g18575 Brassica carinata HOM05D000561 ORTHO05D000514 1.1e-06 57.0 37 62.2
A10p20330 Brassica napus HOM05D000561 ORTHO05D000514 1.1e-06 57.0 37 62.2
C03p11030 Brassica napus HOM05D000561 ORTHO05D000514 1.1e-06 57.0 37 62.2
C09p56930 Brassica napus HOM05D000561 ORTHO05D000514 1.1e-06 57.0 37 62.2
BolC3t13572H Brassica oleracea HOM05D000561 ORTHO05D000514 1.1e-06 57.0 37 62.2
BolC9t58547H Brassica oleracea HOM05D000561 ORTHO05D000514 1.1e-06 57.0 37 62.2
BraA03t10263Z Brassica rapa HOM05D000561 ORTHO05D000514 1.1e-06 57.0 37 62.2
BraA10t44104Z Brassica rapa HOM05D000561 ORTHO05D000514 1.1e-06 57.0 37 62.2
Thhalv10013617m.g Eutrema salsugineum HOM05D000561 ORTHO05D000514 1.1e-06 57.0 37 62.2
Nn1g03553 Nelumbo nucifera HOM05D000561 ORTHO05D000514 1.1e-06 57.0 57 47.4
Rhsim13G0222000 Rhododendron simsii HOM05D000561 ORTHO05D000514 1.1e-06 57.0 40 57.5
RcHm_v2.0_Chr3g0491021 Rosa chinensis HOM05D000561 ORTHO05D000514 1.1e-06 57.0 38 60.5
vmacro04206 Vaccinium macrocarpon HOM05D000561 ORTHO05D000514 1.1e-06 57.0 43 55.8
A09p64410 Brassica napus HOM05D000561 ORTHO05D000514 1.4e-06 56.6 40 60.0
BraA09t41785Z Brassica rapa HOM05D000561 ORTHO05D000514 1.4e-06 56.6 40 60.0
Duzib168G0910 Durio zibethinus HOM05D000561 ORTHO05D000514 1.4e-06 56.6 37 59.5
PSO339G4568 Papaver somniferum HOM05D000561 ORTHO05D000514 1.4e-06 56.6 37 64.9
AT1G11650 Arabidopsis thaliana HOM05D000561 ORTHO05D000514 1.9e-06 56.2 40 60.0
Gorai.001G139100 Gossypium raimondii HOM05D000561 ORTHO05D000514 1.9e-06 56.2 46 50.0
Hma1.2p1_0606F.1_g188060 Hydrangea macrophylla HOM05D000561 ORTHO05D000514 1.9e-06 56.2 55 45.5
Potri.004G017200 Populus trichocarpa HOM05D000561 ORTHO05D000514 1.9e-06 56.2 34 67.6
PGR119G1727 Punica granatum HOM05D000561 ORTHO05D000514 1.9e-06 56.2 37 62.2
ATR0605G067 Amborella trichopoda HOM05D000561 ORTHO05D000514 2.4e-06 55.8 44 54.5
CDE10G0196 Ceratophyllum demersum HOM05D000561 ORTHO05D000514 2.4e-06 55.8 37 62.2
Glyma.17G014800 Glycine max HOM05D000561 ORTHO05D000514 2.4e-06 55.8 56 46.4
Lsat_1_v5_gn_1_66300 Lactuca sativa HOM05D000561 ORTHO05D000514 2.4e-06 55.8 38 57.9
Prupe.5G028700 Prunus persica HOM05D000561 ORTHO05D000514 2.4e-06 55.8 46 56.5
Gohir.A10G013600 Gossypium hirsutum HOM05D000561 ORTHO05D000514 3.2e-06 55.5 56 48.2
HanXRQChr13g0405951 Helianthus annuus HOM05D000561 ORTHO05D000514 3.2e-06 55.5 38 57.9
Phvul.L009343 Phaseolus vulgaris HOM05D000561 ORTHO05D000514 3.2e-06 55.5 37 62.2
Sp1g10250 Schrenkiella parvula HOM05D000561 ORTHO05D000514 3.2e-06 55.5 38 60.5
TWI34G1960 Tripterygium wilfordii HOM05D000561 ORTHO05D000514 3.2e-06 55.5 37 62.2
Atru.chr3.2740 Acer truncatum HOM05D000561 ORTHO05D000514 4.1e-06 55.1 34 67.6
arahy.Tifrunner.gnm1.ann1.3CX1XJ Arachis hypogaea HOM05D000561 ORTHO05D000514 4.1e-06 55.1 46 54.3
arahy.Tifrunner.gnm1.ann1.X24ZF9 Arachis hypogaea HOM05D000561 ORTHO05D000514 4.1e-06 55.1 46 54.3
CANSAT54G1581 Cannabis sativa HOM05D000561 ORTHO05D000514 4.1e-06 55.1 34 67.6
Carub.0006s1769 Capsella rubella HOM05D000561 ORTHO05D000514 4.1e-06 55.1 37 59.5
Glyma.15G106900 Glycine max HOM05D000561 ORTHO05D000514 4.1e-06 55.1 36 63.9
Lalb_Chr15g0087531 Lupinus albus HOM05D000561 ORTHO05D000514 4.1e-06 55.1 52 50.0
TPR.G37008 Trifolium pratense HOM05D000561 ORTHO05D000514 4.1e-06 55.1 34 67.6
VMungo1080G0863 Vigna mungo HOM05D000561 ORTHO05D000514 4.1e-06 55.1 37 62.2
Carub.0001s1128 Capsella rubella HOM05D000561 ORTHO05D000514 5.4e-06 54.7 40 57.5
FvH4_1g30440 Fragaria vesca HOM05D000561 ORTHO05D000514 5.4e-06 54.7 33 69.7
FAN19G1629 Fragaria x ananassa HOM05D000561 ORTHO05D000514 5.4e-06 54.7 33 69.7
FAN23G0318 Fragaria x ananassa HOM05D000561 ORTHO05D000514 5.4e-06 54.7 33 69.7
Gohir.A07G124500 Gossypium hirsutum HOM05D000561 ORTHO05D000514 5.4e-06 54.7 46 47.8
Gohir.D10G013500 Gossypium hirsutum HOM05D000561 ORTHO05D000514 5.4e-06 54.7 56 48.2
Gorai.011G015300 Gossypium raimondii HOM05D000561 ORTHO05D000514 5.4e-06 54.7 56 48.2
Sabra04G0009500 Salix brachista HOM05D000561 ORTHO05D000514 5.4e-06 54.7 34 64.7
Thecc.09G232000 Theobroma cacao HOM05D000561 ORTHO05D000514 5.4e-06 54.7 46 47.8
arahy.Tifrunner.gnm1.ann1.GE7Z65 Arachis hypogaea HOM05D000561 ORTHO05D000514 7.1e-06 54.3 34 67.6
arahy.Tifrunner.gnm1.ann1.Z4F097 Arachis hypogaea HOM05D000561 ORTHO05D000514 7.1e-06 54.3 34 67.6
CANSAT56G2117 Cannabis sativa HOM05D000561 ORTHO05D000514 7.1e-06 54.3 34 64.7
Ca_00619_v3 Cicer arietinum L. HOM05D000561 ORTHO05D000514 7.1e-06 54.3 43 55.8
ClCG01G004050 Citrullus lanatus HOM05D000561 ORTHO05D000514 7.1e-06 54.3 37 59.5
ClCG03G004810 Citrullus lanatus HOM05D000561 ORTHO05D000514 7.1e-06 54.3 55 45.5
MELO3C002464.2 Cucumis melo HOM05D000561 ORTHO05D000514 7.1e-06 54.3 55 47.3
MELO3C005531.2 Cucumis melo HOM05D000561 ORTHO05D000514 7.1e-06 54.3 37 59.5
CsaV3_5G004230 Cucumis sativus L. HOM05D000561 ORTHO05D000514 7.1e-06 54.3 37 59.5
DCAR_029947 Daucus carota HOM05D000561 ORTHO05D000514 7.1e-06 54.3 35 57.1
Duzib150G0013 Durio zibethinus HOM05D000561 ORTHO05D000514 7.1e-06 54.3 37 56.8
Duzib170G1122 Durio zibethinus HOM05D000561 ORTHO05D000514 7.1e-06 54.3 37 56.8
Eucgr.J00778 Eucalyptus grandis HOM05D000561 ORTHO05D000514 7.1e-06 54.3 34 64.7
Gohir.D07G128800 Gossypium hirsutum HOM05D000561 ORTHO05D000514 7.1e-06 54.3 37 56.8
Lj3g0012879 Lotus japonicus HOM05D000561 ORTHO05D000514 7.1e-06 54.3 34 64.7
MD11G1197600 Malus domestica HOM05D000561 ORTHO05D000514 7.1e-06 54.3 46 52.2
Manes.17G038000 Manihot esculenta HOM05D000561 ORTHO05D000514 7.1e-06 54.3 34 67.6
arahy.Tifrunner.gnm1.ann1.L9HQYR Arachis hypogaea HOM05D000561 ORTHO05D000514 9.2e-06 53.9 34 64.7
Thhalv10007819m.g Eutrema salsugineum HOM05D000561 ORTHO05D000514 9.2e-06 53.9 40 57.5
Lj4g0014654 Lotus japonicus HOM05D000561 ORTHO05D000514 9.2e-06 53.9 44 56.8
Nitab4.5_0003812g0050 Nicotiana tabacum HOM05D000561 ORTHO05D000514 9.2e-06 53.9 74 40.5
Sed0011306 Sechium edule HOM05D000561 ORTHO05D000514 9.2e-06 53.9 37 59.5
Hund07519 Selenicereus undatus HOM05D000561 ORTHO05D000514 9.2e-06 53.9 40 62.5
THA.LOC104818849 Tarenaya hassleriana HOM05D000561 ORTHO05D000514 9.2e-06 53.9 34 64.7
Thecc.06G218500 Theobroma cacao HOM05D000561 ORTHO05D000514 9.2e-06 53.9 55 47.3


User provided reference genes

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