Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23858 Utricularia gibba HOM05D003018 ORTHO05D003402 9.2e-35 150.2 110 100.0
unitig_64.g29777 Utricularia gibba HOM05D003018 ORTHO05D003402 9.2e-35 150.2 110 100.0
unitig_52.g16865 Utricularia gibba HOM05D003018 ORTHO05D003402 1.9e-19 99.4 70 77.1
Lj3C891T18 Lonicera japonica HOM05D003018 ORTHO05D003402 3.3e-16 88.6 67 68.7
Dinv17276 Davidia involucrata HOM05D003018 ORTHO05D003402 1.1e-14 83.6 67 65.7
Oeu017358.1 Olea europaea HOM05D003018 ORTHO05D003402 1.1e-14 83.6 70 64.3
Dinv29191 Davidia involucrata HOM05D003018 ORTHO05D003402 1.8e-14 82.8 67 64.2
SGA_v2.0_scaffold165G38214 Striga asiatica HOM05D003018 ORTHO05D003402 1.2e-13 80.1 67 67.2
MSTRG.26952 Avicennia marina HOM05D003018 ORTHO05D003402 3.4e-13 78.6 67 61.2
vmacro06475 Vaccinium macrocarpon HOM05D003018 ORTHO05D003402 7.6e-13 77.4 70 61.4
Rhsim03G0218500 Rhododendron simsii HOM05D003018 ORTHO05D003402 9.9e-13 77.0 71 63.4
Migut.F00968 Erythranthe guttata HOM05D003018 ORTHO05D003402 1.7e-12 76.3 70 60.0
TAR375G0624 Trochodendron aralioides HOM05D003018 ORTHO05D003402 2.2e-12 75.9 67 64.2
Peaxi162Scf01026g00260 Petunia axillaris HOM05D003018 ORTHO05D003402 6.4e-12 74.3 67 62.7
VMungo1309G0595 Vigna mungo HOM05D003018 ORTHO05D003402 8.4e-12 73.9 67 58.2
CsaV3_5G000150 Cucumis sativus L. HOM05D003018 ORTHO05D003402 2.4e-11 72.4 67 58.2
PGR142G0210 Punica granatum HOM05D003018 ORTHO05D003402 2.4e-11 72.4 67 59.7
CAN.G303.60 Capsicum annuum HOM05D003018 ORTHO05D003402 3.2e-11 72.0 67 62.7
QL09p005993 Quercus lobata HOM05D003018 ORTHO05D003402 3.2e-11 72.0 67 59.7
Sed0009908 Sechium edule HOM05D003018 ORTHO05D003402 3.2e-11 72.0 67 59.7
Actinidia34288 Actinidia chinensis HOM05D003018 ORTHO05D003402 4.2e-11 71.6 67 61.2
Manes.05G197500 Manihot esculenta HOM05D003018 ORTHO05D003402 5.4e-11 71.2 67 59.7
arahy.Tifrunner.gnm1.ann1.KA8TW6 Arachis hypogaea HOM05D003018 ORTHO05D003402 7.1e-11 70.9 67 61.2
arahy.Tifrunner.gnm1.ann1.SR3247 Arachis hypogaea HOM05D003018 ORTHO05D003402 7.1e-11 70.9 67 61.2
MELO3C005915.2 Cucumis melo HOM05D003018 ORTHO05D003402 7.1e-11 70.9 67 59.7
Migut.F00122 Erythranthe guttata HOM05D003018 ORTHO05D003402 7.1e-11 70.9 54 66.7
Glyma.06G139200 Glycine max HOM05D003018 ORTHO05D003402 7.1e-11 70.9 63 60.3
Nitab4.5_0000021g0210 Nicotiana tabacum HOM05D003018 ORTHO05D003402 7.1e-11 70.9 67 61.2
Nitab4.5_0007121g0040 Nicotiana tabacum HOM05D003018 ORTHO05D003402 7.1e-11 70.9 67 61.2
Potri.015G000600 Populus trichocarpa HOM05D003018 ORTHO05D003402 7.1e-11 70.9 65 58.5
Actinidia08721 Actinidia chinensis HOM05D003018 ORTHO05D003402 1.2e-10 70.1 67 59.7
Ca_16839_v3 Cicer arietinum L. HOM05D003018 ORTHO05D003402 1.2e-10 70.1 67 56.7
ClCG01G000020 Citrullus lanatus HOM05D003018 ORTHO05D003402 1.2e-10 70.1 67 58.2
Glyma.04G225600 Glycine max HOM05D003018 ORTHO05D003402 1.2e-10 70.1 57 64.9
Lj1g0024936 Lotus japonicus HOM05D003018 ORTHO05D003402 1.2e-10 70.1 67 56.7
PGSC0003DMG400000572 Solanum tuberosum HOM05D003018 ORTHO05D003402 1.2e-10 70.1 67 59.7
CSS0041512 Camellia sinensis var. sinensis HOM05D003018 ORTHO05D003402 1.6e-10 69.7 59 61.0
Prupe.2G322200 Prunus persica HOM05D003018 ORTHO05D003402 1.6e-10 69.7 67 58.2
Solyc03g079940.3 Solanum lycopersicum HOM05D003018 ORTHO05D003402 1.6e-10 69.7 67 59.7
Sopen03g027480 Solanum pennellii HOM05D003018 ORTHO05D003402 1.6e-10 69.7 67 59.7
CDE02G1662 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 2.7e-10 68.9 65 53.8
Sabra15G0000400 Salix brachista HOM05D003018 ORTHO05D003402 2.7e-10 68.9 65 56.9
Cpa.g.sc3.187 Carica papaya HOM05D003018 ORTHO05D003402 3.5e-10 68.6 45 75.6
Lsat_1_v5_gn_2_135421 Lactuca sativa HOM05D003018 ORTHO05D003402 3.5e-10 68.6 67 59.7
Sed0018717 Sechium edule HOM05D003018 ORTHO05D003402 3.5e-10 68.6 65 55.4
Potri.012G004600 Populus trichocarpa HOM05D003018 ORTHO05D003402 4.6e-10 68.2 65 60.0
Duzib068G0518 Durio zibethinus HOM05D003018 ORTHO05D003402 6.0e-10 67.8 52 63.5
Phvul.009G040400 Phaseolus vulgaris HOM05D003018 ORTHO05D003402 6.0e-10 67.8 67 53.7
SalBow4G0431 Salvia bowleyana HOM05D003018 ORTHO05D003402 7.8e-10 67.4 54 63.0
Duzib205G1477 Durio zibethinus HOM05D003018 ORTHO05D003402 1.0e-09 67.0 45 73.3
TAR374G1266 Trochodendron aralioides HOM05D003018 ORTHO05D003402 1.0e-09 67.0 67 62.7
Thecc.03G212100 Theobroma cacao HOM05D003018 ORTHO05D003402 1.3e-09 66.6 45 71.1
Lalb_Chr08g0239411 Lupinus albus HOM05D003018 ORTHO05D003402 1.7e-09 66.2 62 58.1
Lalb_Chr11g0067561 Lupinus albus HOM05D003018 ORTHO05D003402 1.7e-09 66.2 62 58.1
PGR042G2079 Punica granatum HOM05D003018 ORTHO05D003402 1.7e-09 66.2 45 75.6
TWI39G0588 Tripterygium wilfordii HOM05D003018 ORTHO05D003402 1.7e-09 66.2 61 60.7
Gohir.D09G181900 Gossypium hirsutum HOM05D003018 ORTHO05D003402 2.3e-09 65.9 45 68.9
Lsat_1_v5_gn_0_9661 Lactuca sativa HOM05D003018 ORTHO05D003402 3.0e-09 65.5 67 55.2
CDE06G0409 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 3.9e-09 65.1 44 75.0
COL.COLO4_14400 Corchorus olitorius HOM05D003018 ORTHO05D003402 3.9e-09 65.1 45 71.1
Nn2g15903 Nelumbo nucifera HOM05D003018 ORTHO05D003402 3.9e-09 65.1 65 55.4
Lalb_Chr23g0272051 Lupinus albus HOM05D003018 ORTHO05D003402 5.1e-09 64.7 47 68.1
RcHm_v2.0_Chr1g0383311 Rosa chinensis HOM05D003018 ORTHO05D003402 5.1e-09 64.7 48 64.6
CANSAT21G0709 Cannabis sativa HOM05D003018 ORTHO05D003402 6.6e-09 64.3 67 55.2
CiPaw.06G038200 Carya illinoinensis HOM05D003018 ORTHO05D003402 6.6e-09 64.3 67 52.2
Haze_00335 Corylus avellana HOM05D003018 ORTHO05D003402 6.6e-09 64.3 61 59.0
Duzib084G0455 Durio zibethinus HOM05D003018 ORTHO05D003402 6.6e-09 64.3 45 68.9
MD01G1231500 Malus domestica HOM05D003018 ORTHO05D003402 6.6e-09 64.3 67 56.7
EL10Ac3g05130 Beta vulgaris HOM05D003018 ORTHO05D003402 8.7e-09 63.9 64 57.8
Eucgr.A00976 Eucalyptus grandis HOM05D003018 ORTHO05D003402 1.1e-08 63.5 45 68.9
Gorai.006G203900 Gossypium raimondii HOM05D003018 ORTHO05D003402 1.1e-08 63.5 45 66.7
THA.LOC104814958 Tarenaya hassleriana HOM05D003018 ORTHO05D003402 1.5e-08 63.2 63 52.4
Atru.chr12.2500 Acer truncatum HOM05D003018 ORTHO05D003402 2.5e-08 62.4 45 68.9
Atru.chr12.2524 Acer truncatum HOM05D003018 ORTHO05D003402 2.5e-08 62.4 45 68.9
ECA232G4756 Erigeron canadensis HOM05D003018 ORTHO05D003402 2.5e-08 62.4 46 65.2
FAN01G2324 Fragaria x ananassa HOM05D003018 ORTHO05D003402 3.3e-08 62.0 48 58.3
FAN10G3922 Fragaria x ananassa HOM05D003018 ORTHO05D003402 3.3e-08 62.0 48 58.3
Gohir.D12G245300 Gossypium hirsutum HOM05D003018 ORTHO05D003402 3.3e-08 62.0 52 61.5
Gorai.008G262900 Gossypium raimondii HOM05D003018 ORTHO05D003402 3.3e-08 62.0 52 61.5
Medtr3g093380 Medicago truncatula HOM05D003018 ORTHO05D003402 3.3e-08 62.0 63 52.4
ATR0582G341 Amborella trichopoda HOM05D003018 ORTHO05D003402 4.3e-08 61.6 43 74.4
FvH4_7g33330 Fragaria vesca HOM05D003018 ORTHO05D003402 4.3e-08 61.6 48 58.3
FAN03G3459 Fragaria x ananassa HOM05D003018 ORTHO05D003402 4.3e-08 61.6 48 58.3
FAN10G1538 Fragaria x ananassa HOM05D003018 ORTHO05D003402 4.3e-08 61.6 48 58.3
Gohir.A12G244400 Gossypium hirsutum HOM05D003018 ORTHO05D003402 4.3e-08 61.6 52 59.6
Lsat_1_v5_gn_8_4220 Lactuca sativa HOM05D003018 ORTHO05D003402 4.3e-08 61.6 67 52.2
THA.LOC104798993 Tarenaya hassleriana HOM05D003018 ORTHO05D003402 4.3e-08 61.6 48 62.5
DCAR_014570 Daucus carota HOM05D006062 ORTHO05D007613 5.6e-08 61.2 47 66.0
Gohir.D11G016900 Gossypium hirsutum HOM05D003018 ORTHO05D003402 7.3e-08 60.8 61 57.4
Gorai.007G017700 Gossypium raimondii HOM05D003018 ORTHO05D003402 7.3e-08 60.8 61 57.4
PSO478G2764 Papaver somniferum HOM05D003018 ORTHO05D003402 7.3e-08 60.8 46 67.4
PSO017G1017 Papaver somniferum HOM05D003018 ORTHO05D003402 9.6e-08 60.5 44 70.5
Aa31LG11G3900 Aethionema arabicum HOM05D003018 ORTHO05D003402 1.3e-07 60.1 48 62.5
Eucgr.K00480 Eucalyptus grandis HOM05D003018 ORTHO05D003402 1.3e-07 60.1 67 50.7
Psat1g196200 Pisum sativum HOM05D003018 ORTHO05D003402 1.3e-07 60.1 63 49.2
Psat6g092160 Pisum sativum HOM05D003018 ORTHO05D003402 1.3e-07 60.1 63 49.2
CDE02G1646 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 1.6e-07 59.7 44 70.5
Ciclev10021773m.g Citrus clementina HOM05D003018 ORTHO05D003402 1.6e-07 59.7 48 62.5
Gohir.A11G017100 Gossypium hirsutum HOM05D003018 ORTHO05D003402 1.6e-07 59.7 61 55.7
Lsat_1_v5_gn_2_3400 Lactuca sativa HOM05D003018 ORTHO05D003402 1.6e-07 59.7 67 52.2
Aqoxy5G02912 Aquilegia oxysepala HOM05D003018 ORTHO05D003402 2.1e-07 59.3 44 65.9
CSS0003954 Camellia sinensis var. sinensis HOM05D003018 ORTHO05D003402 2.1e-07 59.3 51 60.8
HanXRQChr10g0283991 Helianthus annuus HOM05D003018 ORTHO05D003402 2.1e-07 59.3 46 63.0
HanXRQChr16g0499771 Helianthus annuus HOM05D003018 ORTHO05D003402 2.1e-07 59.3 46 63.0
MBI07_g11061_MAGBIO Magnolia biondii HOM05D003018 ORTHO05D003402 2.1e-07 59.3 65 52.3
A06p18200 Brassica napus HOM05D003018 ORTHO05D003402 2.8e-07 58.9 66 53.0
CARHR158570 Cardamine hirsuta HOM05D003018 ORTHO05D003402 2.8e-07 58.9 67 49.3
Sp5g12550 Schrenkiella parvula HOM05D003018 ORTHO05D003402 2.8e-07 58.9 46 60.9
AT5G24650 Arabidopsis thaliana HOM05D003018 ORTHO05D003402 3.6e-07 58.5 48 60.4
AUR62028118 Chenopodium quinoa HOM05D003018 ORTHO05D003402 3.6e-07 58.5 67 49.3
AL6G36250 Arabidopsis lyrata HOM05D003018 ORTHO05D003402 4.8e-07 58.2 48 58.3
CiPaw.05G208700 Carya illinoinensis HOM05D003018 ORTHO05D003402 4.8e-07 58.2 63 52.4
AUR62005947 Chenopodium quinoa HOM05D003018 ORTHO05D003402 4.8e-07 58.2 67 47.8
Thhalv10004788m.g Eutrema salsugineum HOM05D003018 ORTHO05D003402 4.8e-07 58.2 48 60.4
BraA06t24904Z Brassica rapa HOM05D003018 ORTHO05D003402 6.2e-07 57.8 66 51.5
Carub.0006s2250 Capsella rubella HOM05D003018 ORTHO05D003402 6.2e-07 57.8 48 58.3
CARHR188810 Cardamine hirsuta HOM05D003018 ORTHO05D003402 6.2e-07 57.8 48 58.3
Sp2g22740 Schrenkiella parvula HOM05D003018 ORTHO05D003402 6.2e-07 57.8 48 60.4
Aa31LG4G18050 Aethionema arabicum HOM05D003018 ORTHO05D003402 8.1e-07 57.4 45 62.2
C08p24540 Brassica napus HOM05D003018 ORTHO05D003402 8.1e-07 57.4 45 62.2
BolC8t50072H Brassica oleracea HOM05D003018 ORTHO05D003402 8.1e-07 57.4 45 62.2
Thhalv10010930m.g Eutrema salsugineum HOM05D003018 ORTHO05D003402 8.1e-07 57.4 66 48.5
MD07G1303500 Malus domestica HOM05D003018 ORTHO05D003402 8.1e-07 57.4 45 66.7
BcaNung01249 Brassica carinata HOM05D003018 ORTHO05D003402 1.1e-06 57.0 45 64.4
BcaNung02005 Brassica carinata HOM05D003018 ORTHO05D003402 1.1e-06 57.0 45 64.4
C07p43070 Brassica napus HOM05D003018 ORTHO05D003402 1.1e-06 57.0 45 64.4
BolC7t44834H Brassica oleracea HOM05D003018 ORTHO05D003402 1.1e-06 57.0 45 64.4
Pp3c16_18310 Physcomitrium patens HOM05D025156 ORTHO05D003402 1.4e-06 56.6 46 56.5
HPP92_007053 Vanilla planifolia HOM05D003018 ORTHO05D003402 2.4e-06 55.8 51 56.9
AT3G49560 Arabidopsis thaliana HOM05D003018 ORTHO05D003402 3.1e-06 55.5 66 47.0
BcaB01g00697 Brassica carinata HOM05D003018 ORTHO05D003402 3.1e-06 55.5 45 62.2
A06p35470 Brassica napus HOM05D003018 ORTHO05D003402 3.1e-06 55.5 48 60.4
BraA06t26470Z Brassica rapa HOM05D003018 ORTHO05D003402 3.1e-06 55.5 48 60.4
Carub.0005s1589 Capsella rubella HOM05D003018 ORTHO05D003402 3.1e-06 55.5 45 60.0
Pp3c25_7060 Physcomitrium patens HOM05D003018 ORTHO05D003402 3.1e-06 55.5 46 54.3
BcaC07g39417 Brassica carinata HOM05D003018 ORTHO05D003402 4.0e-06 55.1 45 60.0
Ah.13g071050 Amaranthus hybridus HOM05D003018 ORTHO05D003402 5.3e-06 54.7 67 49.3


User provided reference genes

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