Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 2.9e-96 355.1 170 100.0
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 1.0e-53 213.8 171 62.6
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 1.4e-50 203.4 170 62.9
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 3.2e-50 202.2 147 65.3
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 7.0e-50 201.1 165 62.4
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 3.5e-49 198.7 174 58.6
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 4.6e-49 198.4 170 57.1
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 7.8e-49 197.6 174 58.6
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 1.3e-48 196.8 115 79.1
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 3.9e-48 195.3 114 78.9
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 8.6e-48 194.1 114 72.8
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 1.1e-47 193.7 107 78.5
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 5.6e-47 191.4 183 60.1
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 7.3e-47 191.0 162 63.0
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 1.2e-46 190.3 112 78.6
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 1.2e-46 190.3 112 78.6
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 2.1e-46 189.5 111 80.2
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 2.1e-46 189.5 112 76.8
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 2.8e-46 189.1 167 56.3
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 2.8e-46 189.1 112 80.4
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 3.6e-46 188.7 111 78.4
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 4.7e-46 188.3 168 61.9
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 6.2e-46 188.0 111 76.6
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 1.8e-45 186.4 159 59.7
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 3.1e-45 185.7 113 77.0
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 4.0e-45 185.3 111 78.4
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 5.2e-45 184.9 113 74.3
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 5.2e-45 184.9 124 71.8
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 8.9e-45 184.1 138 67.4
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 8.9e-45 184.1 127 70.1
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 1.2e-44 183.7 113 76.1
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 1.2e-44 183.7 113 76.1
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 1.2e-44 183.7 113 76.1
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 1.2e-44 183.7 113 76.1
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 1.2e-44 183.7 180 55.0
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 1.5e-44 183.3 111 74.8
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 2.0e-44 183.0 106 76.4
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 2.0e-44 183.0 111 77.5
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 2.0e-44 183.0 111 75.7
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 2.6e-44 182.6 119 73.9
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 2.6e-44 182.6 111 75.7
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 3.4e-44 182.2 129 66.7
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 3.4e-44 182.2 113 74.3
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 4.4e-44 181.8 113 75.2
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 4.4e-44 181.8 113 75.2
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 4.4e-44 181.8 153 60.1
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 5.8e-44 181.4 175 58.3
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 5.8e-44 181.4 178 57.9
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 7.5e-44 181.0 111 78.4
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 9.8e-44 180.6 120 72.5
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 9.8e-44 180.6 106 77.4
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 9.8e-44 180.6 111 73.9
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 9.8e-44 180.6 178 57.9
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 9.8e-44 180.6 119 73.1
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 9.8e-44 180.6 112 75.0
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 9.8e-44 180.6 113 76.1
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 1.3e-43 180.3 119 72.3
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.3e-43 180.3 111 73.9
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 1.7e-43 179.9 108 75.9
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 2.2e-43 179.5 119 72.3
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 2.2e-43 179.5 109 76.1
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 2.9e-43 179.1 126 69.0
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 2.9e-43 179.1 106 75.5
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 2.9e-43 179.1 170 58.2
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 2.9e-43 179.1 164 59.1
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 3.7e-43 178.7 162 58.6
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 3.7e-43 178.7 111 77.5
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 3.7e-43 178.7 106 75.5
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 4.9e-43 178.3 111 73.0
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 6.4e-43 177.9 119 71.4
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 6.4e-43 177.9 159 60.4
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 1.1e-42 177.2 106 76.4
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 1.4e-42 176.8 162 56.2
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 1.9e-42 176.4 162 55.6
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 3.2e-42 175.6 111 74.8
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 3.2e-42 175.6 107 73.8
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 3.2e-42 175.6 107 73.8
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 3.2e-42 175.6 108 75.9
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 5.4e-42 174.9 170 54.7
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 7.0e-42 174.5 177 54.8
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 7.0e-42 174.5 106 74.5
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 9.2e-42 174.1 121 69.4
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.2e-41 173.7 107 73.8
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 1.6e-41 173.3 115 68.7
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 2.0e-41 172.9 106 73.6
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 3.5e-41 172.2 111 74.8
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 6.0e-41 171.4 105 72.4
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 1.0e-40 170.6 149 56.4
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 1.3e-40 170.2 107 72.0
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 1.3e-40 170.2 169 53.3
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 6.6e-40 167.9 105 71.4
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 4.3e-39 165.2 116 64.7
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 2.1e-38 162.9 160 50.6
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 6.2e-38 161.4 116 64.7
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 6.2e-38 161.4 116 64.7
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 6.8e-37 157.9 103 69.9
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 1.2e-36 157.1 155 51.6
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 2.6e-36 156.0 95 74.7
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 1.4e-34 150.2 178 46.1
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 3.2e-34 149.1 113 58.4
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 3.2e-34 149.1 132 58.3
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 4.1e-34 148.7 114 57.9
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 7.1e-34 147.9 129 54.3
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 1.2e-33 147.1 115 56.5
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.6e-33 146.7 108 59.3
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 1.6e-33 146.7 148 50.0
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 2.7e-33 146.0 104 61.5
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 3.5e-33 145.6 174 44.3
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 4.6e-33 145.2 114 57.0
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 4.6e-33 145.2 110 59.1
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 6.0e-33 144.8 108 59.3
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.0e-32 144.1 114 57.9
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 1.3e-32 143.7 162 44.4
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 1.7e-32 143.3 107 57.9
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 2.3e-32 142.9 110 58.2
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 2.3e-32 142.9 110 57.3
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 2.3e-32 142.9 108 58.3
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 3.0e-32 142.5 114 55.3
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 3.0e-32 142.5 114 56.1
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 5.1e-32 141.7 116 56.9
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 5.1e-32 141.7 104 60.6
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 5.1e-32 141.7 107 57.9
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 8.6e-32 141.0 110 56.4
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 8.6e-32 141.0 106 58.5
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 1.5e-31 140.2 131 48.1
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 1.5e-31 140.2 161 47.2
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.5e-31 139.4 109 56.9
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 2.5e-31 139.4 133 54.1
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 2.5e-31 139.4 111 54.1
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 3.3e-31 139.0 108 56.5
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 4.3e-31 138.7 114 53.5
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 4.3e-31 138.7 108 55.6
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 4.3e-31 138.7 114 55.3
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 7.3e-31 137.9 106 55.7
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 7.3e-31 137.9 107 57.0
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 7.3e-31 137.9 107 57.0
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 9.5e-31 137.5 105 61.0
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 2.1e-30 136.3 114 55.3
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.1e-30 136.3 109 56.0
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.8e-30 136.0 109 56.0
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 1.1e-29 134.0 112 52.7
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 1.4e-29 133.7 120 53.3
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 1.5e-28 130.2 95 62.1
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 3.4e-28 129.0 108 52.8
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 3.4e-28 129.0 105 57.1
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 5.8e-28 128.3 133 48.1
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 7.6e-28 127.9 123 48.0
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 9.9e-28 127.5 114 50.0
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 1.3e-27 127.1 108 47.2
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 2.9e-27 125.9 137 44.5
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 6.4e-27 124.8 97 58.8
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 2.4e-26 122.9 103 57.3
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 5.4e-26 121.7 113 47.8
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 3.5e-25 119.0 108 50.0
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 4.6e-25 118.6 97 54.6
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 1.1e-23 114.0 198 33.8
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 1.5e-23 113.6 115 47.8
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 1.5e-23 113.6 115 47.8
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 3.3e-23 112.5 59 79.7
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 1.2e-22 110.5 61 77.0
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 4.7e-22 108.6 94 52.1
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 5.2e-21 105.1 221 30.3
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 4.4e-20 102.1 122 44.3
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 1.7e-19 100.1 53 77.4
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 2.2e-19 99.8 59 71.2
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 1.1e-18 97.4 113 48.7
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 4.6e-17 92.0 61 65.6
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 3.6e-14 82.4 105 41.0
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 3.4e-12 75.9 77 49.4
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 5.8e-12 75.1 48 66.7
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 1.9e-10 70.1 96 39.6
AUR62005315 Chenopodium quinoa HOM05D003884 ORTHO05D004482 3.2e-10 69.3 54 53.7
Nn3g16971 Nelumbo nucifera HOM05D003884 ORTHO05D004482 1.2e-09 67.4 54 55.6
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 2.3e-08 63.2 47 55.3
Cc11_g14300 Coffea canephora HOM05D003884 ORTHO05D004482 2.3e-08 63.2 53 52.8
RcHm_v2.0_Chr4g0444421 Rosa chinensis HOM05D003884 ORTHO05D004482 1.1e-07 60.8 51 51.0
Lalb_Chr05g0217181 Lupinus albus HOM05D003884 ORTHO05D004482 1.5e-07 60.5 55 45.5
Mapoly0021s0016 Marchantia polymorpha HOM05D003884 ORTHO05D004482 1.9e-07 60.1 96 33.3
Oeu001664.1 Olea europaea HOM05D003884 ORTHO05D004482 3.3e-07 59.3 58 41.4
HanXRQChr15g0476661 Helianthus annuus HOM05D003884 ORTHO05D004482 7.4e-07 58.2 54 48.1
MD13G1087300 Malus domestica HOM05D003884 ORTHO05D004482 7.4e-07 58.2 48 45.8
Medtr7g101780 Medicago truncatula HOM05D001475 ORTHO05D001525 9.6e-07 57.8 39 66.7
TPR.G36109 Trifolium pratense HOM05D003884 ORTHO05D004482 3.7e-06 55.8 101 34.7


User provided reference genes

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