Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 0.0e+00 1449.5 916 100.0
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 2.6e-223 779.6 984 57.7
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 4.9e-214 748.8 971 63.0
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 1.4e-213 747.3 967 63.7
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 5.2e-200 702.2 1135 43.5
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 8.9e-200 701.4 1053 45.0
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 3.5e-196 689.5 997 57.3
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 1.7e-187 660.6 972 58.5
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 2.3e-187 660.2 990 57.6
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 2.3e-187 660.2 989 58.3
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 3.1e-184 649.8 988 58.0
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 2.6e-183 646.7 961 57.9
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 7.1e-181 638.6 975 56.9
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 7.1e-181 638.6 986 57.9
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 7.9e-180 635.2 977 57.3
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 7.9e-180 635.2 977 57.3
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 1.7e-179 634.0 971 56.6
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 1.7e-179 634.0 979 58.5
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 6.6e-179 632.1 979 57.1
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 2.5e-178 630.2 980 57.3
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 5.6e-178 629.0 973 56.6
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 2.8e-177 626.7 986 57.4
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 3.1e-176 623.2 981 56.8
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 5.3e-176 622.5 1012 56.0
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.7e-174 617.5 973 56.6
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 2.4e-173 613.6 978 55.9
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 4.2e-173 612.8 980 56.3
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 2.1e-172 610.5 976 56.5
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 4.6e-172 609.4 966 57.3
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 7.9e-172 608.6 969 56.6
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 1.3e-171 607.8 982 56.7
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 1.8e-171 607.4 1034 54.7
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 6.7e-171 605.5 1038 54.4
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 8.7e-171 605.1 979 56.3
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 3.3e-170 603.2 1039 53.9
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 7.4e-170 602.1 971 55.3
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 9.6e-170 601.7 970 56.2
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 1.3e-169 601.3 965 56.7
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 1.3e-169 601.3 1038 54.4
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 2.1e-169 600.5 1020 54.0
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 2.8e-169 600.1 1032 53.9
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 6.2e-169 599.0 939 56.4
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 6.2e-169 599.0 985 54.8
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 1.1e-168 598.2 982 56.1
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 1.4e-168 597.8 1029 54.1
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 2.4e-168 597.0 1038 53.5
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 2.4e-168 597.0 978 55.1
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 6.9e-168 595.5 1033 53.6
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 9.0e-168 595.1 980 55.5
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 9.0e-168 595.1 486 61.3
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 1.2e-167 594.7 983 55.0
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 2.0e-167 594.0 1028 53.3
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 3.4e-167 593.2 1057 52.5
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 5.8e-167 592.4 970 56.2
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 1.7e-166 590.9 990 54.7
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 2.2e-166 590.5 959 56.3
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.8e-166 589.7 1002 55.1
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 3.8e-166 589.7 491 60.1
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.9e-165 587.4 931 56.7
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 1.2e-164 584.7 969 50.2
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 3.5e-164 583.2 949 56.9
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.8e-163 580.9 1033 53.4
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 3.0e-163 580.1 1034 52.6
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 8.7e-163 578.6 978 52.8
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 1.9e-162 577.4 906 57.7
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 8.2e-161 572.0 493 59.4
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 4.1e-160 569.7 1006 51.2
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 1.2e-159 568.2 953 55.8
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 1.5e-159 567.8 968 54.2
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 2.9e-158 563.5 1026 50.9
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 2.9e-158 563.5 1032 52.5
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 3.8e-158 563.1 952 55.8
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 6.5e-158 562.4 963 53.8
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 6.5e-158 562.4 956 55.6
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 2.5e-157 560.5 492 55.9
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 4.2e-157 559.7 1011 54.0
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 5.5e-157 559.3 982 50.9
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 4.6e-156 556.2 972 51.7
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 1.3e-155 554.7 989 51.4
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 1.3e-155 554.7 990 51.4
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 3.0e-155 553.5 982 53.6
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 3.0e-155 553.5 969 54.7
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 5.1e-155 552.7 964 54.7
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 8.7e-155 552.0 977 48.3
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 8.7e-155 552.0 1019 53.1
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 4.8e-153 546.2 981 53.9
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 1.8e-152 544.3 1011 49.9
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.5e-151 539.7 393 65.9
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 5.9e-151 539.3 983 50.8
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 1.7e-150 537.7 979 53.5
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 6.5e-150 535.8 1006 51.8
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.4e-149 534.6 1004 51.6
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 7.4e-146 522.3 932 55.0
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 1.7e-145 521.2 490 55.1
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.2e-145 520.8 999 51.1
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.4e-144 518.1 1001 51.2
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 6.9e-144 515.8 993 49.7
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 1.5e-138 498.0 950 50.4
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 1.0e-134 485.3 482 52.5
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 3.6e-132 476.9 951 46.3
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 2.0e-127 461.1 965 41.5
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 1.7e-126 458.0 487 48.0
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 2.6e-106 391.0 944 39.8
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 1.4e-96 358.6 486 40.7
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 3.0e-94 350.9 829 34.3
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 5.2e-91 340.1 253 63.6
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 3.7e-89 334.0 439 43.3
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 2.2e-81 308.1 834 48.6
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 1.9e-80 305.1 749 53.8
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 2.0e-74 285.0 534 33.1
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 6.0e-71 273.5 201 64.7
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 5.6e-69 266.9 828 31.9
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 4.0e-67 260.8 306 46.1
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 7.1e-56 223.4 706 53.0
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 2.1e-47 195.3 461 29.9
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 1.4e-43 182.6 266 42.1
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 2.8e-36 158.3 423 34.0
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 6.3e-36 157.1 349 40.1
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 8.2e-36 156.8 114 68.4
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 1.4e-35 156.0 114 68.4
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.8e-35 155.6 93 78.5
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 3.8e-33 147.9 264 41.7
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.3e-30 138.7 112 63.4
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 1.1e-29 136.3 89 69.7
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 5.3e-27 127.5 136 44.1
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 9.1e-27 126.7 171 42.7
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 1.5e-26 125.9 93 64.5
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 3.2e-24 118.2 281 34.5
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 7.2e-24 117.1 278 32.7
CSS0042095 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 5.2e-22 110.9 71 74.6
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 8.2e-20 103.6 129 45.0
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 1.1e-19 103.2 105 53.3
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.7e-17 95.9 82 56.1
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.2e-15 89.7 187 40.1
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 2.7e-10 72.0 100 43.0
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 5.9e-10 70.9 224 31.2
ATR0030G038 Amborella trichopoda HOM05D047453 ORTHO05D006199 1.9e-08 65.9 197 31.5
ATR0661G285 Amborella trichopoda HOM05D047453 ORTHO05D069139 1.9e-08 65.9 198 31.3
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 5.5e-08 64.3 61 54.1
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 1.2e-07 63.2 53 54.7


User provided reference genes

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