Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_62.g23230 Utricularia gibba HOM05D002380 ORTHO05D008286 4.4e-186 654.4 323 100.0
Migut.H01235 Erythranthe guttata HOM05D002380 ORTHO05D008286 2.2e-100 369.8 250 72.8
SalBow1G4831 Salvia bowleyana HOM05D002380 ORTHO05D008286 5.9e-98 361.7 246 71.1
SalBow1G6561 Salvia bowleyana HOM05D002380 ORTHO05D008286 7.7e-98 361.3 246 71.1
vmacro12176 Vaccinium macrocarpon HOM05D002380 ORTHO05D008286 8.5e-97 357.8 245 71.8
Actinidia13740 Actinidia chinensis HOM05D002380 ORTHO05D008286 8.0e-95 351.3 246 70.3
CSS0029680 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D008286 1.8e-94 350.1 245 70.2
Nn1g03403 Nelumbo nucifera HOM05D002380 ORTHO05D008286 3.0e-94 349.4 244 67.6
GSVIVG01030484001 Vitis vinifera HOM05D002380 ORTHO05D008286 6.8e-94 348.2 246 69.1
CiPaw.04G112000 Carya illinoinensis HOM05D002380 ORTHO05D008286 1.2e-93 347.4 246 70.3
TAR626G1235 Trochodendron aralioides HOM05D002380 ORTHO05D008286 1.2e-93 347.4 246 68.7
Medtr8g465870 Medicago truncatula HOM05D002380 ORTHO05D008286 1.5e-93 347.1 246 68.7
Nitab4.5_0005164g0050 Nicotiana tabacum HOM05D002380 ORTHO05D006960 3.4e-93 345.9 246 68.3
Rhsim06G0166100 Rhododendron simsii HOM05D002380 ORTHO05D008286 3.4e-93 345.9 245 69.0
Duzib138G0368 Durio zibethinus HOM05D002380 ORTHO05D008286 4.4e-93 345.5 246 69.1
Dinv08737 Davidia involucrata HOM05D002380 ORTHO05D008286 5.7e-93 345.1 246 68.7
QL08p031162 Quercus lobata HOM05D002380 ORTHO05D008286 7.5e-93 344.7 246 70.3
FvH4_6g42610 Fragaria vesca HOM05D002380 ORTHO05D008286 9.8e-93 344.4 246 67.9
Psat0s2606g0080 Pisum sativum HOM05D002380 ORTHO05D008286 9.8e-93 344.4 246 68.7
FAN05G1087 Fragaria x ananassa HOM05D002380 ORTHO05D008286 1.3e-92 344.0 246 67.5
Atru.chr6.3236 Acer truncatum HOM05D002380 ORTHO05D008286 1.7e-92 343.6 246 68.7
Sopen01g045360 Solanum pennellii HOM05D002380 ORTHO05D008286 2.2e-92 343.2 246 68.7
Potri.014G156800 Populus trichocarpa HOM05D002380 ORTHO05D008286 2.8e-92 342.8 246 67.9
HanXRQChr10g0306601 Helianthus annuus HOM05D002380 ORTHO05D008286 3.7e-92 342.4 246 68.7
Sabra14G0118600 Salix brachista HOM05D002380 ORTHO05D008286 3.7e-92 342.4 246 67.9
TPR.G26188 Trifolium pratense HOM05D002380 ORTHO05D008286 3.7e-92 342.4 246 68.7
Ca_06119_v3 Cicer arietinum L. HOM05D002380 ORTHO05D008286 4.8e-92 342.0 246 67.5
MD09G1112100 Malus domestica HOM05D002380 ORTHO05D008286 4.8e-92 342.0 246 66.7
Prupe.3G212600 Prunus persica HOM05D002380 ORTHO05D008286 4.8e-92 342.0 246 66.7
Nitab4.5_0003247g0030 Nicotiana tabacum HOM05D002380 ORTHO05D006960 8.3e-92 341.3 244 67.2
Solyc01g102950.3 Solanum lycopersicum HOM05D002380 ORTHO05D008286 2.4e-91 339.7 246 67.9
CAN.G855.60 Capsicum annuum HOM05D002380 ORTHO05D008286 3.1e-91 339.3 246 67.9
Cc05_g03220 Coffea canephora HOM05D002380 ORTHO05D008286 3.1e-91 339.3 245 67.8
Haze_12786 Corylus avellana HOM05D002380 ORTHO05D008286 3.1e-91 339.3 246 68.7
arahy.Tifrunner.gnm1.ann1.Y9X1U6 Arachis hypogaea HOM05D002380 ORTHO05D008286 4.1e-91 339.0 246 67.1
Cpa.g.sc132.5 Carica papaya HOM05D002380 ORTHO05D008286 4.1e-91 339.0 245 67.8
arahy.Tifrunner.gnm1.ann1.C2B2I7 Arachis hypogaea HOM05D002380 ORTHO05D008286 9.1e-91 337.8 246 67.5
COL.COLO4_21855 Corchorus olitorius HOM05D002380 ORTHO05D008286 1.2e-90 337.4 246 67.5
Hma1.2p1_0445F.1_g154520 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 1.2e-90 337.4 246 67.5
Cfa014331 Carpinus fangiana HOM05D002380 ORTHO05D008286 1.6e-90 337.0 246 68.3
FAN14G4830 Fragaria x ananassa HOM05D002380 ORTHO05D008286 2.0e-90 336.7 255 65.5
RcHm_v2.0_Chr2g0158461 Rosa chinensis HOM05D002380 ORTHO05D008286 2.0e-90 336.7 246 66.7
ECA234G2702 Erigeron canadensis HOM05D002380 ORTHO05D008286 2.7e-90 336.3 246 66.3
LjContig00564g0001978 Lotus japonicus HOM05D002380 ORTHO05D008286 2.7e-90 336.3 246 67.1
Lalb_Chr04g0249901 Lupinus albus HOM05D002380 ORTHO05D008286 2.7e-90 336.3 246 66.7
Lj1A778T40 Lonicera japonica HOM05D002380 ORTHO05D008286 3.5e-90 335.9 265 63.8
LjContig00564g0004339 Lotus japonicus HOM05D002380 ORTHO05D008286 3.5e-90 335.9 246 67.1
DCAR_019750 Daucus carota HOM05D002380 ORTHO05D008286 4.5e-90 335.5 244 68.0
PSO541G2284 Papaver somniferum HOM05D002380 ORTHO05D008286 4.5e-90 335.5 244 66.8
Glyma.14G046600 Glycine max HOM05D002380 ORTHO05D008286 7.7e-90 334.7 246 67.5
Gohir.D07G193100 Gossypium hirsutum HOM05D002380 ORTHO05D008286 1.0e-89 334.3 246 67.1
TWI18G0959 Tripterygium wilfordii HOM05D002380 ORTHO05D008286 1.0e-89 334.3 246 66.3
Peaxi162Scf00011g02118 Petunia axillaris HOM05D002380 ORTHO05D008286 1.7e-89 333.6 261 64.8
Gorai.001G216200 Gossypium raimondii HOM05D002380 ORTHO05D008286 2.9e-89 332.8 246 66.7
Hma1.2p1_0445F.1_g154530 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 6.5e-89 331.6 246 66.7
PSO675G4452 Papaver somniferum HOM05D002380 ORTHO05D008286 6.5e-89 331.6 244 66.4
Eucgr.A01100 Eucalyptus grandis HOM05D002380 ORTHO05D008286 8.6e-89 331.3 244 66.4
Manes.12G071600 Manihot esculenta HOM05D002380 ORTHO05D008286 8.6e-89 331.3 246 66.7
Ciclev10014719m.g Citrus clementina HOM05D002380 ORTHO05D008286 1.1e-88 330.9 246 67.1
ClCG02G002150 Citrullus lanatus HOM05D002380 ORTHO05D008286 1.9e-88 330.1 240 67.1
Gohir.A07G186600 Gossypium hirsutum HOM05D002380 ORTHO05D008286 1.9e-88 330.1 246 66.3
Sc21g0001190 Simmondsia chinensis HOM05D002380 ORTHO05D008286 7.2e-88 328.2 245 65.3
Sed0027871 Sechium edule HOM05D002380 ORTHO05D008286 1.6e-87 327.0 251 63.3
CANSAT64G0203 Cannabis sativa HOM05D002380 ORTHO05D008286 2.1e-87 326.6 246 63.4
PGR042G3960 Punica granatum HOM05D002380 ORTHO05D008286 2.1e-87 326.6 246 67.1
VMungo0647G2578 Vigna mungo HOM05D002380 ORTHO05D008286 6.1e-87 325.1 246 65.4
AUR62037919 Chenopodium quinoa HOM05D002380 ORTHO05D008286 8.0e-87 324.7 240 64.6
MELO3C018839.2 Cucumis melo HOM05D002380 ORTHO05D008286 1.0e-86 324.3 240 64.6
CsaV3_7G003340 Cucumis sativus L. HOM05D002380 ORTHO05D008286 1.8e-86 323.6 240 64.6
AUR62040170 Chenopodium quinoa HOM05D002380 ORTHO05D008286 3.0e-86 322.8 240 65.4
EL10Ac7g16733 Beta vulgaris HOM05D002380 ORTHO05D008286 1.7e-84 317.0 240 62.9
CDE04G2212 Ceratophyllum demersum HOM05D002380 ORTHO05D008286 6.3e-84 315.1 249 62.2
Os08g0422000 Oryza sativa ssp. japonica HOM05D002380 ORTHO05D008286 1.4e-83 313.9 240 63.3
Phvul.008G211500 Phaseolus vulgaris HOM05D002380 ORTHO05D008286 1.4e-83 313.9 239 65.7
Thecc.01G180100 Theobroma cacao HOM05D002380 ORTHO05D008286 1.8e-83 313.5 246 64.2
CARHR126480 Cardamine hirsuta HOM05D002380 ORTHO05D008286 2.0e-82 310.1 244 61.5
ATR0059G008 Amborella trichopoda HOM05D002380 ORTHO05D008286 2.7e-82 309.7 247 60.3
AL4G28040 Arabidopsis lyrata HOM05D002380 ORTHO05D008286 1.3e-81 307.4 244 61.1
Sp4g14960 Schrenkiella parvula HOM05D002380 ORTHO05D008286 1.7e-81 307.0 244 60.7
A03p18220 Brassica napus HOM05D002380 ORTHO05D008286 2.3e-81 306.6 244 61.1
BolC3t14508H Brassica oleracea HOM05D002380 ORTHO05D008286 2.9e-81 306.2 244 61.1
Ah.15g091260 Amaranthus hybridus HOM05D002380 ORTHO05D008286 3.8e-81 305.8 232 64.2
BcaC01g05900 Brassica carinata HOM05D002380 ORTHO05D008286 3.8e-81 305.8 244 60.7
C03p21270 Brassica napus HOM05D002380 ORTHO05D008286 5.0e-81 305.4 244 60.7
Thhalv10016422m.g Eutrema salsugineum HOM05D002380 ORTHO05D008286 8.6e-81 304.7 244 61.1
MBI19_g44049_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 1.5e-80 303.9 240 64.6
Aa31LG5G4710 Aethionema arabicum HOM05D002380 ORTHO05D008286 1.9e-80 303.5 244 59.4
BraA03t11082Z Brassica rapa HOM05D002380 ORTHO05D008286 1.9e-80 303.5 244 60.2
Carub.0004s1397 Capsella rubella HOM05D002380 ORTHO05D008286 2.5e-80 303.1 244 59.8
AT2G32640 Arabidopsis thaliana HOM05D002380 ORTHO05D008286 5.6e-80 302.0 244 60.2
BcaB01g03970 Brassica carinata HOM05D002380 ORTHO05D008286 5.6e-80 302.0 244 59.8
HPP92_026432 Vanilla planifolia HOM05D002380 ORTHO05D008286 7.3e-80 301.6 215 67.9
THA.LOC104826140 Tarenaya hassleriana HOM05D002380 ORTHO05D008286 2.6e-77 293.1 240 59.6
Lsat_1_v5_gn_5_123621 Lactuca sativa HOM05D002380 ORTHO05D008286 8.3e-76 288.1 282 55.3
Mapoly0041s0126 Marchantia polymorpha HOM05D002380 ORTHO05D008286 1.1e-72 277.7 315 46.7
SMO111G0098 Selaginella moellendorffii HOM05D002380 ORTHO05D008286 3.1e-70 269.6 227 55.9
AagrBONN_evm.TU.Sc2ySwM_368.2332 Anthoceros agrestis HOM05D002380 ORTHO05D008286 3.4e-69 266.2 240 55.0
Pp3c11_22720 Physcomitrium patens HOM05D002380 ORTHO05D008286 2.2e-68 263.5 250 50.4
AUR62044039 Chenopodium quinoa HOM05D002380 ORTHO05D008286 1.2e-63 247.7 240 53.8
SGA_v2.0_scaffold159G37563 Striga asiatica HOM05D002380 ORTHO05D001198 3.0e-57 226.5 158 70.3
FAN02G0433 Fragaria x ananassa HOM05D002380 ORTHO05D008286 3.3e-56 223.0 255 49.4
Aqoxy1G02993 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 5.2e-54 215.7 166 61.4
Cre06.g264250 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 3.5e-50 203.0 265 42.3
Zm00001eb179140 Zea mays HOM05D002380 ORTHO05D008286 1.0e-49 201.4 151 62.9
Cre04.g221550 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 2.4e-43 180.3 247 39.7
SEGI_17941 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 2.3e-33 147.1 114 60.5
Hund20420 Selenicereus undatus HOM05D002380 ORTHO05D010615 1.5e-29 134.4 85 69.4
MBI19_g42463_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 1.9e-16 90.9 58 74.1
CBR_g8454 Chara braunii HOM05D002380 ORTHO05D008286 1.3e-15 88.2 99 38.4
Hma1.2p1_0895F.1_g233700 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 2.4e-14 84.0 57 68.4
Hund20419 Selenicereus undatus HOM05D002380 ORTHO05D008286 1.5e-13 81.3 83 47.0
PGSC0003DMG400020719 Solanum tuberosum HOM05D002380 ORTHO05D008286 2.1e-10 70.9 48 62.5
Aqoxy1G02984 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 3.3e-08 63.5 42 66.7
Lj1P772T14 Lonicera japonica HOM05D002380 ORTHO05D008286 1.4e-06 58.2 67 50.7
CBR_g8455 Chara braunii HOM05D002380 ORTHO05D008286 3.1e-06 57.0 61 49.2


User provided reference genes

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