Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_61.g26219 Utricularia gibba HOM05D000439 ORTHO05D006154 1.2e-158 563.1 291 100.0
Migut.I00648 Erythranthe guttata HOM05D000439 ORTHO05D006154 5.2e-53 212.2 252 49.6
SGA_v2.0_scaffold5G02819 Striga asiatica HOM05D000439 ORTHO05D006154 9.8e-52 208.0 274 46.7
Oeu051173.1 Olea europaea HOM05D000439 ORTHO05D006154 2.5e-47 193.4 237 47.3
Cc04_g05540 Coffea canephora HOM05D000439 ORTHO05D006154 7.1e-42 175.3 301 40.2
Thecc.03G143900 Theobroma cacao HOM05D000439 ORTHO05D006154 6.8e-37 158.7 233 42.5
Duzib205G0088 Durio zibethinus HOM05D000439 ORTHO05D006154 8.9e-37 158.3 231 44.2
Cpa.g.sc13.206 Carica papaya HOM05D000439 ORTHO05D006154 3.4e-36 156.4 241 41.9
Solyc03g117930.4 Solanum lycopersicum HOM05D000439 ORTHO05D006154 7.6e-36 155.2 226 40.7
Duzib084G0576 Durio zibethinus HOM05D000439 ORTHO05D006154 1.7e-35 154.1 235 42.6
Sopen03g036830 Solanum pennellii HOM05D000439 ORTHO05D006154 1.7e-35 154.1 226 40.3
arahy.Tifrunner.gnm1.ann1.R8UNTY Arachis hypogaea HOM05D000439 ORTHO05D006154 2.2e-35 153.7 256 37.9
COL.COLO4_37292 Corchorus olitorius HOM05D000439 ORTHO05D006154 2.2e-35 153.7 240 41.7
Gohir.D03G111600 Gossypium hirsutum HOM05D000439 ORTHO05D006154 4.9e-35 152.5 244 42.2
Gohir.A03G055200 Gossypium hirsutum HOM05D000439 ORTHO05D006154 1.1e-34 151.4 219 44.7
arahy.Tifrunner.gnm1.ann1.94UTWG Arachis hypogaea HOM05D000439 ORTHO05D006154 1.9e-34 150.6 260 38.8
Gorai.003G118000 Gossypium raimondii HOM05D000439 ORTHO05D006154 1.2e-33 147.9 221 43.9
Rhsim12G0182700 Rhododendron simsii HOM05D000439 ORTHO05D006154 2.1e-33 147.1 233 41.2
Carub.0008s1113 Capsella rubella HOM05D000439 ORTHO05D006154 4.6e-33 146.0 247 38.9
GSVIVG01014063001 Vitis vinifera HOM05D000439 ORTHO05D006154 4.6e-33 146.0 226 42.5
Phvul.009G159400 Phaseolus vulgaris HOM05D000439 ORTHO05D006154 1.7e-32 144.1 232 40.5
Actinidia08922 Actinidia chinensis HOM05D000439 ORTHO05D006154 2.3e-32 143.7 258 37.2
CAN.G1008.33 Capsicum annuum HOM05D000439 ORTHO05D006154 5.1e-32 142.5 226 39.8
Nn3g16172 Nelumbo nucifera HOM05D000439 ORTHO05D006154 5.1e-32 142.5 258 37.2
Actinidia36853 Actinidia chinensis HOM05D000439 ORTHO05D006154 6.6e-32 142.1 253 36.8
Manes.06G128900 Manihot esculenta HOM05D000439 ORTHO05D006154 6.6e-32 142.1 215 41.4
Nitab4.5_0000976g0310 Nicotiana tabacum HOM05D000439 ORTHO05D006154 6.6e-32 142.1 247 38.1
Gohir.A07G045400 Gossypium hirsutum HOM05D000439 ORTHO05D006154 8.7e-32 141.7 204 43.1
Sed0010080 Sechium edule HOM05D000439 ORTHO05D006154 8.7e-32 141.7 211 44.1
Manes.14G042300 Manihot esculenta HOM05D000439 ORTHO05D006154 1.9e-31 140.6 221 40.7
QL10p000140 Quercus lobata HOM05D000439 ORTHO05D006154 1.9e-31 140.6 235 40.0
Aa31LG3G7580 Aethionema arabicum HOM05D000439 ORTHO05D006154 3.3e-31 139.8 256 37.1
AL8G25340 Arabidopsis lyrata HOM05D000439 ORTHO05D006154 5.6e-31 139.0 248 37.9
Potri.015G110066 Populus trichocarpa HOM05D000439 ORTHO05D006154 5.6e-31 139.0 233 38.6
BcaC01g06107 Brassica carinata HOM05D000439 ORTHO05D006154 7.3e-31 138.7 269 35.7
Dinv23249 Davidia involucrata HOM05D000439 ORTHO05D006154 1.3e-30 137.9 327 33.0
AT4G00650 Arabidopsis thaliana HOM05D000439 ORTHO05D006154 1.6e-30 137.5 293 34.1
MELO3C003262.2 Cucumis melo HOM05D000439 ORTHO05D006154 2.1e-30 137.1 250 40.4
Gorai.001G052900 Gossypium raimondii HOM05D000439 ORTHO05D006154 2.1e-30 137.1 205 41.5
ClCG04G003180 Citrullus lanatus HOM05D000439 ORTHO05D006154 3.6e-30 136.3 258 39.1
Glyma.04G203400 Glycine max HOM05D000439 ORTHO05D006154 4.8e-30 136.0 225 38.7
Lj1g0000423 Lotus japonicus HOM05D000439 ORTHO05D006154 6.2e-30 135.6 265 34.7
CsaV3_4G029810 Cucumis sativus L. HOM05D000439 ORTHO05D006154 8.1e-30 135.2 138 54.3
BcaB08g35465 Brassica carinata HOM05D000439 ORTHO05D006154 1.4e-29 134.4 287 34.1
Aqoxy5G03342 Aquilegia oxysepala HOM05D000439 ORTHO05D006154 4.0e-29 132.9 279 35.8
Peaxi162Scf00091g00516 Petunia axillaris HOM05D000439 ORTHO05D006154 5.3e-29 132.5 247 38.5
Eucgr.H00244 Eucalyptus grandis HOM05D000439 ORTHO05D006154 6.9e-29 132.1 216 43.5
Sp6g13280 Schrenkiella parvula HOM05D000439 ORTHO05D006154 6.9e-29 132.1 251 36.3
TWI23G1133 Tripterygium wilfordii HOM05D000439 ORTHO05D006154 6.9e-29 132.1 312 34.0
BcaC04g20734 Brassica carinata HOM05D000439 ORTHO05D006154 9.0e-29 131.7 280 34.6
C09p39760 Brassica napus HOM05D000439 ORTHO05D006154 9.0e-29 131.7 280 34.6
BolC9t56878H Brassica oleracea HOM05D000439 ORTHO05D006154 9.0e-29 131.7 280 34.6
BraSC35t45999Z Brassica rapa HOM05D000439 ORTHO05D006154 1.2e-28 131.3 280 33.9
DCAR_025619 Daucus carota HOM05D000439 ORTHO05D006154 5.8e-28 129.0 278 35.6
TWI14G1070 Tripterygium wilfordii HOM05D000439 ORTHO05D006154 9.9e-28 128.3 267 35.2
BolC3t14311H Brassica oleracea HOM05D000439 ORTHO05D006154 1.3e-27 127.9 238 35.3
THA.LOC104808041 Tarenaya hassleriana HOM05D000439 ORTHO05D006154 1.3e-27 127.9 234 35.0
BcaC01g06069 Brassica carinata HOM05D000439 ORTHO05D006154 1.7e-27 127.5 238 35.3
A10p08000 Brassica napus HOM05D000439 ORTHO05D006154 1.7e-27 127.5 263 35.0
Ciclev10033769m.g Citrus clementina HOM05D000439 ORTHO05D006154 1.7e-27 127.5 256 34.4
Medtr3g098290 Medicago truncatula HOM05D000439 ORTHO05D006154 4.9e-27 125.9 148 48.0
C03p19250 Brassica napus HOM05D000439 ORTHO05D006154 6.4e-27 125.6 254 33.5
CSS0035359 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D006154 6.4e-27 125.6 139 50.4
Glyma.06G162100 Glycine max HOM05D000439 ORTHO05D006154 6.4e-27 125.6 231 37.2
VMungo1309G2046 Vigna mungo HOM05D000439 ORTHO05D006154 6.4e-27 125.6 137 50.4
Nitab4.5_0007669g0030 Nicotiana tabacum HOM05D000439 ORTHO05D006154 1.9e-26 124.0 241 36.1
BraA03t10927Z Brassica rapa HOM05D000439 ORTHO05D006154 3.2e-26 123.2 279 32.6
CDE02G0348 Ceratophyllum demersum HOM05D000439 ORTHO05D006154 3.2e-26 123.2 244 36.5
Dinv13691 Davidia involucrata HOM05D000439 ORTHO05D006154 4.2e-26 122.9 138 48.6
Peaxi162Scf00091g00412 Petunia axillaris HOM05D000439 ORTHO05D006154 5.4e-26 122.5 298 31.2
A03p16370 Brassica napus HOM05D000439 ORTHO05D006154 7.1e-26 122.1 279 33.3
MBI07_g11053_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D006154 4.6e-25 119.4 238 35.3
Ca_17046_v3 Cicer arietinum L. HOM05D000422 ORTHO05D001248 6.0e-25 119.0 137 46.7
Thhalv10012996m.g Eutrema salsugineum HOM05D000439 ORTHO05D006154 1.3e-24 117.9 268 34.7
Nitab4.5_0012621g0010 Nicotiana tabacum HOM05D000439 ORTHO05D006154 1.3e-24 117.9 227 33.5
TAR374G1365 Trochodendron aralioides HOM05D000439 ORTHO05D006154 1.3e-24 117.9 129 49.6
Solyc03g117910.3 Solanum lycopersicum HOM05D000439 ORTHO05D006154 5.1e-24 115.9 135 44.4
CAN.G1008.30 Capsicum annuum HOM05D000439 ORTHO05D006154 6.6e-24 115.5 258 32.6
Psat5g056000 Pisum sativum HOM05D000439 ORTHO05D006154 8.7e-24 115.2 259 32.0
Nitab4.5_0000976g0300 Nicotiana tabacum HOM05D000439 ORTHO05D006154 3.3e-23 113.2 144 44.4
Lj9P489T62 Lonicera japonica HOM05D000439 ORTHO05D006154 4.3e-23 112.8 129 50.4
PGSC0003DMG400014443 Solanum tuberosum HOM05D000439 ORTHO05D006154 4.3e-23 112.8 165 43.6
PGSC0003DMG400031150 Solanum tuberosum HOM05D000439 ORTHO05D006154 5.6e-23 112.5 154 42.2
Nitab4.5_0001216g0050 Nicotiana tabacum HOM05D000439 ORTHO05D006154 9.6e-23 111.7 238 30.7
TPR.G7812 Trifolium pratense HOM05D000439 ORTHO05D006154 1.3e-22 111.3 144 43.1
Nitab4.5_0000433g0090 Nicotiana tabacum HOM05D000439 ORTHO05D006154 1.6e-22 110.9 270 31.1
ATR0582G020 Amborella trichopoda HOM05D000439 ORTHO05D006154 2.8e-22 110.2 225 33.8
Nitab4.5_0001000g0080 Nicotiana tabacum HOM05D000439 ORTHO05D006154 4.8e-22 109.4 271 30.6
Sopen12g021430 Solanum pennellii HOM05D000439 ORTHO05D006154 4.8e-22 109.4 165 43.0
Solyc12g042440.2 Solanum lycopersicum HOM05D000439 ORTHO05D006154 6.2e-22 109.0 165 42.4
MBI11_g04259_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D006154 1.4e-21 107.8 238 34.5
CAN.G47.4 Capsicum annuum HOM05D000439 ORTHO05D006154 2.4e-21 107.1 142 45.1
Lalb_Chr11g0068951 Lupinus albus HOM05D000439 ORTHO05D006154 6.9e-21 105.5 266 28.9
Sopen03g036820 Solanum pennellii HOM05D000439 ORTHO05D006154 6.9e-21 105.5 135 41.5
Peaxi162Scf00091g00051 Petunia axillaris HOM05D000439 ORTHO05D006154 9.0e-21 105.1 285 29.8
CAN.G919.28 Capsicum annuum HOM05D000439 ORTHO05D006154 1.2e-20 104.8 138 39.9
Nitab4.5_0002540g0130 Nicotiana tabacum HOM05D000439 ORTHO05D006154 2.6e-20 103.6 158 41.1
Peaxi162Scf00314g00840 Petunia axillaris HOM05D000439 ORTHO05D006154 2.6e-20 103.6 120 48.3
ECA246G3042 Erigeron canadensis HOM05D000439 ORTHO05D006154 9.9e-20 101.7 136 42.6
Lsat_1_v5_gn_5_9321 Lactuca sativa HOM05D000439 ORTHO05D006154 4.9e-19 99.4 148 38.5
Nitab4.5_0004781g0040 Nicotiana tabacum HOM05D000439 ORTHO05D006154 8.4e-19 98.6 158 40.5
Nitab4.5_0000433g0080 Nicotiana tabacum HOM05D000439 ORTHO05D006154 1.9e-18 97.4 289 30.1
VMungo1309G0148 Vigna mungo HOM05D000439 ORTHO05D006154 3.2e-18 96.7 251 32.7
ECA246G1416 Erigeron canadensis HOM05D000439 ORTHO05D006154 4.2e-18 96.3 138 38.4
Nitab4.5_0001000g0070 Nicotiana tabacum HOM05D000439 ORTHO05D006154 4.2e-18 96.3 272 28.7
PGSC0003DMG400034493 Solanum tuberosum HOM05D000439 ORTHO05D006154 7.1e-18 95.5 137 39.4
Sopen04g028360 Solanum pennellii HOM05D000439 ORTHO05D006154 9.3e-18 95.1 138 42.8
CARHR257010 Cardamine hirsuta HOM05D000439 ORTHO05D006154 1.2e-17 94.7 168 34.5
PGSC0003DMG400031151 Solanum tuberosum HOM05D000439 ORTHO05D006154 1.6e-17 94.4 137 41.6
PGSC0003DMG400044295 Solanum tuberosum HOM05D000439 ORTHO05D006154 2.1e-17 94.0 136 40.4
Solyc04g072200.3 Solanum lycopersicum HOM05D000439 ORTHO05D006154 3.5e-17 93.2 138 42.0
ECA246G4312 Erigeron canadensis HOM05D007610 ORTHO05D009592 7.9e-17 92.0 143 39.9
Atru.chr6.1963 Acer truncatum HOM05D000439 ORTHO05D006154 1.8e-16 90.9 255 27.8
Sopen06g030920 Solanum pennellii HOM05D000439 ORTHO05D006154 3.0e-16 90.1 136 38.2
HPP92_011666 Vanilla planifolia HOM05D000439 ORTHO05D006154 2.5e-15 87.0 235 28.1
HanXRQChr05g0157581 Helianthus annuus HOM05D000439 ORTHO05D006154 2.8e-14 83.6 154 37.7
Solyc06g074450.3 Solanum lycopersicum HOM05D000439 ORTHO05D006154 2.8e-14 83.6 129 37.2
CAN.G1008.29 Capsicum annuum HOM05D000439 ORTHO05D006154 4.8e-14 82.8 120 42.5
CAN.G564.8 Capsicum annuum HOM05D000439 ORTHO05D006154 4.8e-14 82.8 143 34.3
CAN.G919.14 Capsicum annuum HOM05D000439 ORTHO05D006154 1.1e-13 81.6 124 38.7
HanXRQChr05g0154491 Helianthus annuus HOM05D000439 ORTHO05D006154 2.4e-13 80.5 154 35.7
Lalb_Chr23g0272811 Lupinus albus HOM05D000439 ORTHO05D006154 3.2e-10 70.1 84 44.0
MELO3C024910.2 Cucumis melo HOM05D000439 ORTHO05D001363 7.9e-09 65.5 239 26.4
ECA248G0108 Erigeron canadensis HOM05D000439 ORTHO05D001363 1.9e-07 60.8 162 22.8
Eucgr.K02358 Eucalyptus grandis HOM05D000439 ORTHO05D001363 1.9e-07 60.8 156 25.6
Peaxi162Scf02239g00023 Petunia axillaris HOM05D000439 ORTHO05D001363 2.5e-07 60.5 155 25.8
TAR362G0828 Trochodendron aralioides HOM05D000439 ORTHO05D001363 2.5e-07 60.5 123 29.3
Manes.12G055300 Manihot esculenta HOM05D000439 ORTHO05D001363 3.3e-07 60.1 121 28.9
Nn7g37467 Nelumbo nucifera HOM05D000439 ORTHO05D001363 3.3e-07 60.1 122 31.1
AagrBONN_evm.TU.Sc2ySwM_344.4515 Anthoceros agrestis HOM05D000439 ORTHO05D001363 4.3e-07 59.7 187 26.7
Nn1g09496 Nelumbo nucifera HOM05D000439 ORTHO05D001363 4.3e-07 59.7 122 30.3
Potri.002G239900 Populus trichocarpa HOM05D000439 ORTHO05D001363 7.4e-07 58.9 157 25.5
BcaC03g17648 Brassica carinata HOM05D000439 ORTHO05D001363 1.3e-06 58.2 176 28.4
A02p37430 Brassica napus HOM05D000439 ORTHO05D001363 1.3e-06 58.2 137 29.2
C02p56490 Brassica napus HOM05D000439 ORTHO05D001363 1.3e-06 58.2 176 28.4
BolC2t11708H Brassica oleracea HOM05D000439 ORTHO05D001363 1.3e-06 58.2 176 28.4
Peaxi162Scf01242g00033 Petunia axillaris HOM05D000439 ORTHO05D001363 1.3e-06 58.2 121 28.1
TWI18G0174 Tripterygium wilfordii HOM05D000439 ORTHO05D001363 1.3e-06 58.2 162 25.9
Os03g0851400 Oryza sativa ssp. japonica HOM05D000439 ORTHO05D006154 1.6e-06 57.8 134 26.1
Rhsim08G0200600 Rhododendron simsii HOM05D000439 ORTHO05D006154 1.6e-06 57.8 130 31.5
Sabra14G0134000 Salix brachista HOM05D000439 ORTHO05D001363 2.1e-06 57.4 185 25.4
Sp2g18740 Schrenkiella parvula HOM05D000439 ORTHO05D001363 2.1e-06 57.4 161 25.5
Sed0020305 Sechium edule HOM05D000439 ORTHO05D001363 2.1e-06 57.4 171 25.1
PGSC0003DMG400027670 Solanum tuberosum HOM05D000439 ORTHO05D001363 2.1e-06 57.4 121 28.1
TWI75G0610 Tripterygium wilfordii HOM05D000439 ORTHO05D001363 2.1e-06 57.4 162 25.9
COL.COLO4_34278 Corchorus olitorius HOM05D000439 ORTHO05D001363 2.8e-06 57.0 123 27.6
Dinv07626 Davidia involucrata HOM05D000439 ORTHO05D001363 2.8e-06 57.0 123 26.8
MSTRG.12742 Avicennia marina HOM05D000439 ORTHO05D001363 3.7e-06 56.6 160 26.2
Nitab4.5_0014403g0010 Nicotiana tabacum HOM05D000439 ORTHO05D001363 3.7e-06 56.6 121 28.9
Sed0013322 Sechium edule HOM05D000439 ORTHO05D001363 3.7e-06 56.6 233 26.2
Aa31LG3G2860 Aethionema arabicum HOM05D000439 ORTHO05D001363 4.8e-06 56.2 125 27.2
MSTRG.17959 Avicennia marina HOM05D000439 ORTHO05D001363 4.8e-06 56.2 121 28.9
Gohir.A07G089400 Gossypium hirsutum HOM05D000439 ORTHO05D001363 4.8e-06 56.2 123 28.5
Mapoly0043s0082 Marchantia polymorpha HOM05D000439 ORTHO05D001363 4.8e-06 56.2 213 23.5
Potri.014G175200 Populus trichocarpa HOM05D000439 ORTHO05D001363 4.8e-06 56.2 170 23.5
THA.LOC104822460 Tarenaya hassleriana HOM05D000439 ORTHO05D001363 4.8e-06 56.2 137 25.5
CANSAT25G0025 Cannabis sativa HOM05D000439 ORTHO05D001363 6.2e-06 55.8 187 24.6
CANSAT25G1996 Cannabis sativa HOM05D000439 ORTHO05D001363 6.2e-06 55.8 187 24.6
CiPaw.13G055900 Carya illinoinensis HOM05D000439 ORTHO05D001363 6.2e-06 55.8 147 25.2
Solyc06g082930.3 Solanum lycopersicum HOM05D000439 ORTHO05D001363 6.2e-06 55.8 121 27.3
Migut.N00680 Erythranthe guttata HOM05D000439 ORTHO05D001363 8.2e-06 55.5 153 29.4
Nitab4.5_0001348g0110 Nicotiana tabacum HOM05D000439 ORTHO05D001363 8.2e-06 55.5 121 28.9
QL09p045391 Quercus lobata HOM05D000439 ORTHO05D001363 8.2e-06 55.5 145 25.5
Sopen06g034320 Solanum pennellii HOM05D000439 ORTHO05D001363 8.2e-06 55.5 121 27.3


User provided reference genes

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