Gene: Sopen03g036830
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g036830
- Transcript Identifier Sopen03g036830.1
- Gene Type Coding gene
- Location Spenn-ch03 : 71422096-71429453 : positive
Gene Family Information
- ID HOM05D000439
- #Genes/#Species 1177/97
- Phylogenetic origin
- ID ORTHO05D006154
- #Genes/#Species 146/69
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g036830.1
Descriptions
- Description Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI. | FRIGIDA (FRI) | CONTAINS InterPro DOMAIN/s: Frigida-like | BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048510 | ISO | PLAZA Integrative Orthology | regulation of timing of transition from vegetative to reproductive phase | AT4G00650 |
| GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT4G00650 |
| GO:0010321 | ISO | PLAZA Integrative Orthology | regulation of vegetative phase change | AT4G00650 |
| GO:0010048 | ISO | PLAZA Integrative Orthology | vernalization response | AT4G00650 |
| GO:0009910 | ISO | PLAZA Integrative Orthology | negative regulation of flower development | AT4G00650 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT4G00650 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G00650 |
| GO:0046982 | ISO | PLAZA Integrative Orthology | protein heterodimerization activity | AT4G00650 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G00650 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012474 | Frigida-like |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |