Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 1.1e-286 989.2 481 100.0
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 1.3e-173 613.6 493 62.7
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 1.9e-172 609.8 498 62.7
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 2.7e-171 605.9 478 63.0
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 3.9e-170 602.1 490 60.4
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 9.5e-169 597.4 482 61.4
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 2.5e-161 572.8 496 58.1
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 5.6e-161 571.6 492 58.1
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 9.6e-161 570.9 473 59.8
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 1.6e-160 570.1 475 58.9
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 3.6e-160 568.9 488 59.2
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 4.7e-160 568.5 495 57.8
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 4.7e-160 568.5 490 58.8
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 1.1e-159 567.4 474 58.9
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 1.5e-158 563.5 476 58.6
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 1.7e-157 560.1 482 59.1
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 4.9e-157 558.5 478 58.6
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 6.4e-157 558.1 490 58.4
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 8.4e-157 557.8 482 57.3
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 1.1e-156 557.4 486 58.0
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 1.1e-156 557.4 494 58.1
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 1.9e-156 556.6 475 58.9
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 2.4e-156 556.2 489 56.9
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 2.4e-156 556.2 489 56.9
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 4.2e-156 555.4 473 58.1
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 5.4e-156 555.1 475 58.9
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 5.4e-156 555.1 486 57.6
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 2.1e-155 553.1 499 55.9
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 2.7e-155 552.7 491 57.0
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 3.5e-155 552.4 487 56.3
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 4.6e-155 552.0 514 55.6
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 6.0e-155 551.6 491 56.6
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 6.0e-155 551.6 480 56.0
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 7.8e-155 551.2 480 57.3
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 1.3e-154 550.4 460 58.9
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 1.3e-154 550.4 459 60.1
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 2.3e-154 549.7 493 55.8
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 1.9e-153 546.6 467 59.3
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 2.5e-153 546.2 481 57.0
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 3.3e-153 545.8 458 57.4
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 5.6e-153 545.0 493 56.6
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 3.6e-152 542.3 475 56.6
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 1.1e-151 540.8 462 58.2
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 1.1e-151 540.8 462 58.2
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 1.1e-151 540.8 495 54.5
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 2.4e-151 539.7 487 56.7
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 2.4e-151 539.7 537 52.5
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 9.0e-151 537.7 444 59.2
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 4.4e-150 535.4 513 55.6
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 5.8e-150 535.0 490 56.3
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 7.6e-150 534.6 468 57.1
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 1.7e-149 533.5 480 56.7
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 4.9e-149 531.9 472 56.8
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 4.2e-148 528.9 466 57.1
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 7.1e-148 528.1 480 55.4
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 1.2e-147 527.3 457 57.3
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 1.6e-147 526.9 472 56.4
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 2.1e-147 526.6 447 57.9
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 4.6e-147 525.4 477 56.6
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 4.6e-147 525.4 477 56.6
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 6.0e-147 525.0 452 58.4
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 7.8e-147 524.6 470 55.7
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 1.0e-146 524.2 466 56.7
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 3.0e-146 522.7 503 55.1
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 5.1e-146 521.9 440 59.3
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 1.5e-145 520.4 492 55.1
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 1.5e-145 520.4 447 57.0
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 1.9e-145 520.0 478 56.5
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 3.3e-145 519.2 516 52.5
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 5.6e-145 518.5 451 57.2
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 2.1e-144 516.5 468 56.6
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 4.8e-144 515.4 484 54.5
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 8.1e-144 514.6 489 55.4
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 2.4e-143 513.1 471 55.6
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 6.9e-143 511.5 445 58.2
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 6.4e-141 505.0 422 59.2
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 8.4e-141 504.6 502 51.8
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 1.9e-140 503.4 471 55.6
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 3.2e-140 502.7 413 59.1
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 5.4e-140 501.9 503 52.7
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 7.1e-140 501.5 413 58.8
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 1.2e-139 500.7 424 58.7
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 2.7e-139 499.6 442 56.6
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 1.5e-137 493.8 515 49.3
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 2.1e-136 490.0 467 52.9
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 1.1e-135 487.6 505 51.9
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 4.0e-135 485.7 441 56.2
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 3.4e-134 482.6 472 53.2
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 4.5e-134 482.3 477 52.0
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 1.7e-133 480.3 483 51.1
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 5.7e-129 465.3 499 50.3
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 5.7e-129 465.3 445 52.6
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 2.0e-126 456.8 493 49.3
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 1.4e-119 434.1 470 50.4
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 3.4e-118 429.5 498 47.8
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 3.4e-118 429.5 498 47.8
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 4.5e-118 429.1 471 47.1
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 2.8e-112 409.8 560 41.2
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 3.7e-112 409.5 311 64.0
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 4.5e-110 402.5 544 42.1
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 2.3e-106 390.2 390 52.6
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 3.3e-105 386.3 426 48.8
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 3.5e-102 376.3 455 46.6
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 3.2e-100 369.8 472 46.2
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.9e-92 344.0 395 48.6
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 4.7e-91 339.3 309 56.6
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 4.1e-87 326.2 490 40.2
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 8.5e-85 318.5 326 50.9
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 3.4e-81 306.6 350 47.7
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 3.2e-63 246.9 280 47.5
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 8.6e-61 238.8 139 77.7
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 5.8e-57 226.1 385 34.3
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 9.8e-57 225.3 316 37.7
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 8.3e-56 222.2 289 45.3
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 3.4e-41 173.7 223 42.2
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 4.3e-36 156.8 336 31.0
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 2.8e-27 127.5 119 52.1
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 2.6e-25 120.9 72 79.2
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 2.6e-25 120.9 158 46.8
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 8.4e-24 115.9 95 56.8
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.5e-12 78.6 152 33.6


User provided reference genes

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