Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 9.4e-88 327.0 188 100.0
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 5.2e-70 268.1 186 79.6
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 1.1e-59 233.8 189 71.4
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 4.1e-59 231.9 195 69.7
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 1.2e-58 230.3 190 66.8
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 1.3e-57 226.9 189 67.2
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 1.8e-51 206.5 190 61.6
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 2.4e-51 206.1 194 59.8
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 7.0e-51 204.5 193 66.3
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 7.0e-51 204.5 183 65.6
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 9.2e-51 204.1 183 63.9
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 9.2e-51 204.1 195 59.5
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 9.2e-51 204.1 190 61.6
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 2.7e-50 202.6 190 61.6
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 2.7e-50 202.6 189 60.8
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 3.5e-50 202.2 189 60.8
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 7.8e-50 201.1 193 61.1
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 1.3e-49 200.3 190 60.5
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 1.3e-49 200.3 190 60.5
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 1.3e-49 200.3 189 60.3
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 3.0e-49 199.1 195 59.0
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.6e-47 193.4 188 61.2
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 6.2e-47 191.4 193 62.7
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 6.2e-47 191.4 194 59.3
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 2.3e-46 189.5 192 56.8
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 6.8e-46 188.0 183 60.1
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 6.8e-46 188.0 192 56.2
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 1.5e-45 186.8 190 57.9
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.5e-45 186.8 178 60.1
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.5e-45 186.8 178 60.1
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 1.5e-45 186.8 188 56.9
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 2.6e-45 186.0 189 57.7
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 2.6e-45 186.0 195 57.4
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 3.4e-45 185.7 188 58.0
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 3.4e-45 185.7 200 60.0
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 4.4e-45 185.3 190 57.4
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 4.4e-45 185.3 189 60.8
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 5.8e-45 184.9 195 56.9
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 1.3e-44 183.7 178 60.1
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 2.2e-44 183.0 211 54.0
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 1.1e-43 180.6 192 57.3
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 1.9e-43 179.9 178 59.0
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 1.9e-43 179.9 189 57.1
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 4.1e-43 178.7 190 56.8
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 5.4e-43 178.3 191 56.5
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 5.4e-43 178.3 179 58.1
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 7.0e-43 177.9 188 54.3
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 1.2e-42 177.2 199 55.3
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 1.6e-42 176.8 190 56.3
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 3.5e-42 175.6 191 55.0
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 6.0e-42 174.9 186 54.8
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 6.0e-42 174.9 194 55.7
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 6.0e-42 174.9 191 55.0
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 7.8e-42 174.5 179 57.0
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 1.3e-41 173.7 194 53.6
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 1.3e-41 173.7 199 52.8
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 2.3e-41 172.9 188 56.9
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 3.0e-41 172.6 171 59.1
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 3.0e-41 172.6 179 55.3
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 8.6e-41 171.0 197 53.3
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 1.9e-40 169.9 192 54.7
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 4.3e-40 168.7 191 57.1
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 5.6e-40 168.3 197 54.8
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 5.6e-40 168.3 181 54.7
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 7.3e-40 167.9 179 55.9
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 1.2e-39 167.2 173 56.1
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 1.2e-39 167.2 180 60.6
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 1.6e-39 166.8 188 54.3
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 2.1e-39 166.4 191 57.1
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 2.1e-39 166.4 190 56.8
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 2.8e-39 166.0 190 57.9
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 2.8e-39 166.0 190 53.2
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 6.2e-39 164.9 177 53.1
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 3.1e-38 162.5 179 53.1
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 3.1e-38 162.5 199 52.3
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 5.2e-38 161.8 191 52.4
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 2.0e-37 159.8 185 54.1
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 2.0e-37 159.8 191 55.5
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 2.0e-37 159.8 189 52.9
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 2.6e-37 159.5 192 49.5
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 3.4e-37 159.1 189 51.3
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 3.4e-37 159.1 189 51.3
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 5.8e-37 158.3 176 52.3
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 9.9e-37 157.5 183 50.3
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 1.7e-36 156.8 189 47.6
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 1.7e-36 156.8 180 57.2
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 3.7e-36 155.6 192 49.0
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 3.7e-36 155.6 192 49.0
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 4.9e-36 155.2 171 57.9
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 8.3e-36 154.5 191 55.5
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 8.3e-36 154.5 181 52.5
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 1.9e-35 153.3 194 50.0
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 4.1e-35 152.1 180 56.7
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 5.4e-35 151.8 186 50.5
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 1.2e-34 150.6 191 48.7
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 1.6e-34 150.2 191 51.8
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 2.1e-34 149.8 183 51.4
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 3.5e-34 149.1 183 51.4
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 3.5e-34 149.1 192 50.0
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 1.7e-33 146.7 180 53.3
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 8.6e-33 144.4 146 61.0
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 1.1e-32 144.1 199 44.7
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 2.5e-32 142.9 176 55.1
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 3.3e-32 142.5 145 57.2
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 5.6e-32 141.7 185 43.8
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 2.1e-31 139.8 176 52.3
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 1.1e-30 137.5 208 48.6
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 5.2e-30 135.2 183 47.0
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 5.2e-30 135.2 183 47.0
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 3.4e-29 132.5 124 61.3
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 9.9e-29 131.0 183 47.0
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 1.7e-28 130.2 205 46.3
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 3.8e-28 129.0 194 44.8
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 2.3e-25 119.8 205 42.9
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 6.6e-25 118.2 164 47.6
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 8.6e-25 117.9 146 52.7
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 5.6e-24 115.2 137 51.1
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 7.3e-24 114.8 72 84.7
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 1.6e-23 113.6 145 51.7
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 8.1e-23 111.3 82 72.0
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 1.4e-22 110.5 144 50.0
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 2.6e-21 106.3 82 67.1
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 3.4e-21 105.9 82 68.3
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 5.8e-21 105.1 94 60.6
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 1.7e-20 103.6 145 47.6
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 4.2e-19 99.0 156 46.8
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 4.2e-19 99.0 89 61.8
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 9.6e-16 87.8 59 74.6
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 2.1e-15 86.7 73 60.3
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 4.8e-15 85.5 100 56.0
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 1.1e-14 84.3 109 52.3
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 9.0e-14 81.3 72 61.1
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 2.0e-13 80.1 129 40.3
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 4.5e-13 79.0 83 51.8
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 5.8e-13 78.6 63 66.7
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 3.8e-12 75.9 77 53.2
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 6.7e-09 65.1 180 33.3
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 1.5e-08 63.9 82 45.1
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 2.5e-08 63.2 77 54.5
Aa31LG2G19570 Aethionema arabicum HOM05D005762 ORTHO05D006823 3.7e-07 59.3 75 49.3


User provided reference genes

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