Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25704 Utricularia gibba HOM05D003156 ORTHO05D003508 0.0e+00 1396.3 688 100.0
unitig_0.g194 Utricularia gibba HOM05D003156 ORTHO05D003508 5.8e-236 821.2 735 62.0
SalBow3G0597 Salvia bowleyana HOM05D003156 ORTHO05D003508 7.3e-114 415.6 857 36.4
Migut.F01767 Erythranthe guttata HOM05D003156 ORTHO05D003508 4.8e-113 412.9 740 40.0
MSTRG.370 Avicennia marina HOM05D003156 ORTHO05D003508 2.3e-107 394.0 884 35.0
MSTRG.8149 Avicennia marina HOM05D003156 ORTHO05D003508 4.8e-105 386.3 742 38.4
SGA_v2.0_scaffold341G49358 Striga asiatica HOM05D003156 ORTHO05D003508 3.7e-97 360.1 729 39.2
Dinv11794 Davidia involucrata HOM05D003156 ORTHO05D003508 2.9e-94 350.5 452 47.1
Nitab4.5_0000233g0120 Nicotiana tabacum HOM05D003156 ORTHO05D003508 6.5e-94 349.4 342 57.0
Actinidia03046 Actinidia chinensis HOM05D003156 ORTHO05D003508 1.1e-93 348.6 675 36.0
QL08p056552 Quercus lobata HOM05D003156 ORTHO05D003508 1.1e-93 348.6 369 51.2
SalBow4G2724 Salvia bowleyana HOM05D003156 ORTHO05D003508 3.2e-93 347.1 827 34.1
SGA_v2.0_scaffold51G18682 Striga asiatica HOM05D003156 ORTHO05D003508 4.2e-93 346.7 729 37.2
Dinv31359 Davidia involucrata HOM05D003156 ORTHO05D003508 9.3e-93 345.5 352 54.5
MD01G1110800 Malus domestica HOM05D003156 ORTHO05D003508 1.6e-92 344.7 340 52.4
Ciclev10030482m.g Citrus clementina HOM05D003156 ORTHO05D003508 3.0e-91 340.5 449 45.4
Prupe.2G215600 Prunus persica HOM05D003156 ORTHO05D003508 2.5e-90 337.4 340 53.5
Thecc.10G070400 Theobroma cacao HOM05D003156 ORTHO05D003508 7.4e-90 335.9 344 52.3
Cfa001606 Carpinus fangiana HOM05D003156 ORTHO05D003508 3.7e-89 333.6 443 47.2
Oeu007399.2 Olea europaea HOM05D003156 ORTHO05D003508 3.7e-89 333.6 808 33.4
GSVIVG01016309001 Vitis vinifera HOM05D003156 ORTHO05D003508 8.2e-89 332.4 343 52.5
Cpa.g.sc53.53 Carica papaya HOM05D003156 ORTHO05D003508 1.4e-88 331.6 343 53.4
Lj1C919T3 Lonicera japonica HOM05D003156 ORTHO05D003508 1.8e-88 331.3 357 52.4
Manes.07G103600 Manihot esculenta HOM05D003156 ORTHO05D003508 2.4e-88 330.9 370 51.9
CiPaw.01G274600 Carya illinoinensis HOM05D003156 ORTHO05D003508 3.1e-88 330.5 334 53.6
CiPaw.02G175200 Carya illinoinensis HOM05D003156 ORTHO05D003508 5.3e-88 329.7 440 46.4
Oeu043931.1 Olea europaea HOM05D003156 ORTHO05D003508 5.3e-88 329.7 754 35.4
Hund19345 Selenicereus undatus HOM05D003156 ORTHO05D003508 5.3e-88 329.7 647 37.1
MD12G1111500 Malus domestica HOM05D003156 ORTHO05D003508 6.9e-88 329.3 355 50.1
Cc02_g11460 Coffea canephora HOM05D003156 ORTHO05D003508 9.0e-88 328.9 753 34.0
Haze_16918 Corylus avellana HOM05D003156 ORTHO05D003508 1.5e-87 328.2 443 45.6
CSS0000465 Camellia sinensis var. sinensis HOM05D003156 ORTHO05D003508 2.6e-87 327.4 459 43.6
CAN.G131.2 Capsicum annuum HOM05D003156 ORTHO05D003508 2.6e-87 327.4 342 53.5
Manes.10G044400 Manihot esculenta HOM05D003156 ORTHO05D003508 4.5e-87 326.6 457 46.4
TAR369G0111 Trochodendron aralioides HOM05D003156 ORTHO05D003508 5.9e-87 326.2 381 48.3
Ah.11g043470 Amaranthus hybridus HOM05D003156 ORTHO05D003508 7.7e-87 325.9 655 35.0
CANSAT56G0537 Cannabis sativa HOM05D003156 ORTHO05D003508 1.0e-86 325.5 379 48.3
Sopen04g018550 Solanum pennellii HOM05D003156 ORTHO05D003508 1.0e-86 325.5 388 50.0
RcHm_v2.0_Chr1g0363841 Rosa chinensis HOM05D003156 ORTHO05D003508 1.3e-86 325.1 339 52.2
Gohir.A13G024600 Gossypium hirsutum HOM05D003156 ORTHO05D003508 5.0e-86 323.2 354 49.4
Nn2g13035 Nelumbo nucifera HOM05D003156 ORTHO05D003508 5.0e-86 323.2 409 45.5
Sc20g0001950 Simmondsia chinensis HOM05D003156 ORTHO05D003508 6.5e-86 322.8 662 36.3
Nn2g10723 Nelumbo nucifera HOM05D003156 ORTHO05D003508 1.1e-85 322.0 344 50.0
Gorai.013G026300 Gossypium raimondii HOM05D003156 ORTHO05D003508 1.4e-85 321.6 354 49.2
FvH4_7g19850 Fragaria vesca HOM05D003156 ORTHO05D003508 2.5e-85 320.9 339 51.3
FAN03G0982 Fragaria x ananassa HOM05D003156 ORTHO05D003508 3.2e-85 320.5 339 51.0
Oeu033854.1 Olea europaea HOM05D003156 ORTHO05D003508 3.2e-85 320.5 413 47.7
COL.COLO4_23712 Corchorus olitorius HOM05D003156 ORTHO05D003508 4.2e-85 320.1 355 48.5
AUR62020759 Chenopodium quinoa HOM05D003156 ORTHO05D003508 1.2e-84 318.5 708 34.7
Duzib114G0389 Durio zibethinus HOM05D003156 ORTHO05D003508 1.6e-84 318.2 336 51.5
FAN06G3106 Fragaria x ananassa HOM05D003156 ORTHO05D003508 2.1e-84 317.8 400 46.2
AUR62027953 Chenopodium quinoa HOM05D003156 ORTHO05D003508 2.7e-84 317.4 701 35.0
FAN10G3307 Fragaria x ananassa HOM05D003156 ORTHO05D003508 3.6e-84 317.0 339 50.7
Atru.chr12.725 Acer truncatum HOM05D003156 ORTHO05D003508 6.1e-84 316.2 481 42.8
Gohir.D13G023500 Gossypium hirsutum HOM05D003156 ORTHO05D003508 7.9e-84 315.8 354 48.6
Potri.008G041900 Populus trichocarpa HOM05D003156 ORTHO05D003508 7.9e-84 315.8 353 51.6
TAR081G0003 Trochodendron aralioides HOM05D003156 ORTHO05D003508 7.9e-84 315.8 388 46.4
CSS0022533 Camellia sinensis var. sinensis HOM05D003156 ORTHO05D003508 1.8e-83 314.7 342 52.6
EL10Ac2g03591 Beta vulgaris HOM05D003156 ORTHO05D003508 5.1e-83 313.2 621 38.3
Actinidia38262 Actinidia chinensis HOM05D003156 ORTHO05D003508 1.1e-82 312.0 412 44.4
Potri.010G220000 Populus trichocarpa HOM05D003156 ORTHO05D003508 1.5e-82 311.6 341 50.4
Duzib106G1668 Durio zibethinus HOM05D003156 ORTHO05D003508 3.3e-82 310.5 342 50.6
FAN01G2311 Fragaria x ananassa HOM05D003156 ORTHO05D003508 9.7e-82 308.9 743 33.0
MBI14_g09786_MAGBIO Magnolia biondii HOM05D003156 ORTHO05D003508 1.7e-81 308.1 341 51.0
Lj5g0023323 Lotus japonicus HOM05D003156 ORTHO05D003508 2.2e-81 307.8 339 48.1
Gohir.A10G207200 Gossypium hirsutum HOM05D003156 ORTHO05D003508 6.3e-81 306.2 405 44.2
PGR142G2490 Punica granatum HOM05D003156 ORTHO05D003508 8.2e-81 305.8 357 48.5
Eucgr.G02815 Eucalyptus grandis HOM05D003156 ORTHO05D003508 1.1e-80 305.4 366 49.7
Gorai.011G240800 Gossypium raimondii HOM05D003156 ORTHO05D003508 1.1e-80 305.4 405 44.2
Gohir.D10G215300 Gossypium hirsutum HOM05D003156 ORTHO05D003508 1.8e-80 304.7 405 44.2
Rhsim09G0153200 Rhododendron simsii HOM05D003156 ORTHO05D003508 2.4e-80 304.3 340 52.1
Ca_10580_v3 Cicer arietinum L. HOM05D003156 ORTHO05D003508 9.1e-80 302.4 339 49.0
Sabra08G0028800 Salix brachista HOM05D003156 ORTHO05D003508 9.1e-80 302.4 354 49.4
Glyma.10G212600 Glycine max HOM05D003156 ORTHO05D003508 2.6e-79 300.8 339 48.7
TWI15G0830 Tripterygium wilfordii HOM05D003156 ORTHO05D003508 1.0e-78 298.9 574 36.9
Sabra10G0169800 Salix brachista HOM05D003156 ORTHO05D003508 1.3e-78 298.5 409 44.7
PSO339G2433 Papaver somniferum HOM05D003156 ORTHO05D003508 5.0e-78 296.6 475 40.6
Oeu014390.1 Olea europaea HOM05D003156 ORTHO05D003508 6.5e-78 296.2 673 35.5
vmacro04882 Vaccinium macrocarpon HOM05D003156 ORTHO05D003508 2.5e-77 294.3 345 49.9
Actinidia38263 Actinidia chinensis HOM05D003156 ORTHO05D003508 5.5e-77 293.1 356 47.8
THA.LOC104819148 Tarenaya hassleriana HOM05D003156 ORTHO05D003508 1.2e-76 292.0 431 41.3
VMungo0720G1431 Vigna mungo HOM05D003156 ORTHO05D003508 3.6e-76 290.4 338 46.7
DCAR_006452 Daucus carota HOM05D003156 ORTHO05D003508 6.1e-76 289.7 342 47.4
TAR633G1985 Trochodendron aralioides HOM05D003156 ORTHO05D003508 7.9e-76 289.3 335 48.4
PSO384G3096 Papaver somniferum HOM05D003156 ORTHO05D003508 1.0e-75 288.9 452 41.2
Glyma.20G178500 Glycine max HOM05D003156 ORTHO05D003508 2.3e-75 287.7 336 47.3
MELO3C002897.2 Cucumis melo HOM05D003156 ORTHO05D003508 8.8e-75 285.8 451 40.8
CSS0028910 Camellia sinensis var. sinensis HOM05D003156 ORTHO05D003508 3.3e-74 283.9 342 50.0
Oeu042736.1 Olea europaea HOM05D003156 ORTHO05D003508 5.7e-74 283.1 661 34.8
Lalb_Chr01g0010131 Lupinus albus HOM05D003156 ORTHO05D003508 1.3e-73 282.0 338 45.3
Sed0022604 Sechium edule HOM05D003156 ORTHO05D003508 4.1e-72 276.9 437 41.0
CsaV3_5G025770 Cucumis sativus L. HOM05D003156 ORTHO05D003508 7.0e-72 276.2 455 39.3
Phvul.007G093100 Phaseolus vulgaris HOM05D003156 ORTHO05D003508 1.5e-71 275.0 733 31.1
TPR.G1826 Trifolium pratense HOM05D003156 ORTHO05D003508 2.0e-71 274.6 340 45.6
Psat6g185160 Pisum sativum HOM05D003156 ORTHO05D003508 3.5e-71 273.9 350 43.7
Lalb_Chr19g0129611 Lupinus albus HOM05D003156 ORTHO05D003508 5.0e-70 270.0 336 45.5
ClCG05G020880 Citrullus lanatus HOM05D003156 ORTHO05D003508 8.5e-70 269.2 403 41.7
Medtr1g095570 Medicago truncatula HOM05D003156 ORTHO05D003508 8.5e-70 269.2 371 42.3
Aqoxy2G01803 Aquilegia oxysepala HOM05D003156 ORTHO05D003508 1.1e-69 268.9 351 43.3
Ca_04674_v3 Cicer arietinum L. HOM05D003156 ORTHO05D003508 1.1e-69 268.9 395 42.8
Gohir.D05G297300 Gossypium hirsutum HOM05D003156 ORTHO05D003508 1.9e-69 268.1 320 49.1
Nitab4.5_0004081g0040 Nicotiana tabacum HOM05D003156 ORTHO05D003508 1.6e-68 265.0 675 33.2
Sed0017215 Sechium edule HOM05D003156 ORTHO05D003508 2.1e-68 264.6 396 40.7
Lalb_Chr06g0162221 Lupinus albus HOM05D003156 ORTHO05D003508 1.4e-67 261.9 372 42.2
Lalb_Chr03g0035991 Lupinus albus HOM05D003156 ORTHO05D003508 3.9e-67 260.4 337 44.2
TPR.G36666 Trifolium pratense HOM05D003156 ORTHO05D003508 5.7e-66 256.5 395 41.8
DCAR_019123 Daucus carota HOM05D003156 ORTHO05D003508 9.7e-66 255.8 337 43.3
CsaV3_5G036430 Cucumis sativus L. HOM05D003156 ORTHO05D003508 1.3e-65 255.4 403 41.2
MELO3C012441.2 Cucumis melo HOM05D003156 ORTHO05D003508 2.8e-65 254.2 407 39.8
ECA238G0789 Erigeron canadensis HOM05D003156 ORTHO05D003508 3.7e-65 253.8 705 31.5
Lalb_Chr02g0141981 Lupinus albus HOM05D003156 ORTHO05D003508 8.2e-65 252.7 369 40.4
Lj2g0025480 Lotus japonicus HOM05D003156 ORTHO05D003508 1.8e-64 251.5 383 41.0
arahy.Tifrunner.gnm1.ann1.PUBH8J Arachis hypogaea HOM05D003156 ORTHO05D003508 7.0e-64 249.6 433 36.7
CDE09G0617 Ceratophyllum demersum HOM05D003156 ORTHO05D003508 9.1e-64 249.2 347 43.2
arahy.Tifrunner.gnm1.ann1.0MFP8V Arachis hypogaea HOM05D003156 ORTHO05D003508 3.5e-63 247.3 414 37.2
Medtr6g033350 Medicago truncatula HOM05D003156 ORTHO05D003508 2.9e-62 244.2 677 29.4
CDE02G1002 Ceratophyllum demersum HOM05D003156 ORTHO05D003508 2.5e-61 241.1 344 43.0
SEGI_14396 Sequoiadendron giganteum HOM05D003156 ORTHO05D003508 4.2e-61 240.4 445 37.1
A09p45310 Brassica napus HOM05D003156 ORTHO05D003508 1.2e-60 238.8 351 42.5
Sed0025548 Sechium edule HOM05D003156 ORTHO05D003508 1.2e-60 238.8 306 46.1
BraA09t39994Z Brassica rapa HOM05D003156 ORTHO05D003508 1.6e-60 238.4 464 37.1
BolC8t50370H Brassica oleracea HOM05D003156 ORTHO05D003508 4.7e-60 236.9 460 36.3
C08p27500 Brassica napus HOM05D003156 ORTHO05D003508 6.1e-60 236.5 460 36.3
Zm00001eb355010 Zea mays HOM05D003156 ORTHO05D003508 6.1e-60 236.5 343 40.5
Peaxi162Scf00108g00911 Petunia axillaris HOM05D003156 ORTHO05D003508 8.0e-60 236.1 332 42.5
ATR0314G007 Amborella trichopoda HOM05D003156 ORTHO05D003508 1.0e-59 235.7 529 35.0
THA.LOC104806084 Tarenaya hassleriana HOM05D003156 ORTHO05D003508 2.3e-59 234.6 346 41.3
Actinidia08031 Actinidia chinensis HOM05D003156 ORTHO05D003508 5.2e-59 233.4 482 35.3
Sp5g10010 Schrenkiella parvula HOM05D003156 ORTHO05D003508 5.2e-59 233.4 348 41.4
Aa31csc81G40 Aethionema arabicum HOM05D003156 ORTHO05D003508 1.2e-58 232.3 338 43.2
Aa31LG10G7350 Aethionema arabicum HOM05D003156 ORTHO05D003508 1.2e-58 232.3 378 39.7
Thhalv10010054m.g Eutrema salsugineum HOM05D003156 ORTHO05D003508 1.5e-58 231.9 347 41.8
AL5G32840 Arabidopsis lyrata HOM05D003156 ORTHO05D003508 2.0e-58 231.5 394 38.8
Carub.0005s1861 Capsella rubella HOM05D003156 ORTHO05D003508 5.7e-58 229.9 440 37.7
HanXRQChr11g0323301 Helianthus annuus HOM05D003156 ORTHO05D003508 7.5e-58 229.6 391 40.9
Zm00001eb265240 Zea mays HOM05D003156 ORTHO05D003508 1.3e-57 228.8 452 34.3
CARHR162010 Cardamine hirsuta HOM05D003156 ORTHO05D003508 6.3e-57 226.5 346 40.2
Solyc04g049120.4 Solanum lycopersicum HOM05D003156 ORTHO05D003508 1.1e-56 225.7 378 39.2
Ah.10g032860 Amaranthus hybridus HOM05D003156 ORTHO05D003508 2.4e-56 224.6 374 39.3
HanXRQChr14g0457261 Helianthus annuus HOM05D003156 ORTHO05D003508 7.7e-55 219.5 384 38.8
AT3G52250 Arabidopsis thaliana HOM05D003156 ORTHO05D003508 2.2e-54 218.0 355 39.4
Lsat_1_v5_gn_2_113740 Lactuca sativa HOM05D003156 ORTHO05D003508 3.8e-54 217.2 435 36.8
BraA03t13976Z Brassica rapa HOM05D003156 ORTHO05D003508 1.6e-52 211.8 380 38.7
Sed0017725 Sechium edule HOM05D003156 ORTHO05D003508 2.7e-52 211.1 334 40.4
A03p48760 Brassica napus HOM05D003156 ORTHO05D003508 3.6e-52 210.7 385 37.9
C07p46850 Brassica napus HOM05D003156 ORTHO05D003508 3.6e-52 210.7 385 38.2
BolC7t45201H Brassica oleracea HOM05D003156 ORTHO05D003508 3.6e-52 210.7 385 38.2
Gohir.A05G297400 Gossypium hirsutum HOM05D003156 ORTHO05D003508 3.7e-49 200.7 349 39.5
PGR044G0836 Punica granatum HOM05D003156 ORTHO05D003508 2.5e-45 188.0 338 38.8
Glyma.13G071701 Glycine max HOM05D003156 ORTHO05D003508 8.0e-44 183.0 397 34.0
Lsat_1_v5_gn_2_113780 Lactuca sativa HOM05D003156 ORTHO05D003508 4.0e-43 180.6 334 38.0
Psat1g100160 Pisum sativum HOM05D003156 ORTHO05D003508 5.7e-42 176.8 334 37.7
TWI38G2393 Tripterygium wilfordii HOM05D003156 ORTHO05D003508 1.5e-37 162.2 211 43.6
Pp3c11_8780 Physcomitrium patens HOM05D003156 ORTHO05D003508 9.8e-34 149.4 324 32.4
Pp3c11_8790 Physcomitrium patens HOM05D003156 ORTHO05D003508 9.8e-34 149.4 324 32.4
SEGI_14984 Sequoiadendron giganteum HOM05D003156 ORTHO05D003508 2.9e-33 147.9 309 34.0
AagrBONN_evm.TU.Sc2ySwM_228.3670 Anthoceros agrestis HOM05D003156 ORTHO05D003508 1.4e-32 145.6 325 31.1
Pp3c4_7100 Physcomitrium patens HOM05D003156 ORTHO05D003508 3.9e-30 137.5 429 29.1
Mapoly0001s0480 Marchantia polymorpha HOM05D003156 ORTHO05D003508 6.6e-30 136.7 316 32.3
Pp3c7_16800 Physcomitrium patens HOM05D003156 ORTHO05D003508 2.5e-29 134.8 316 31.3
Pp3c4_6990 Physcomitrium patens HOM05D003156 ORTHO05D003508 5.6e-29 133.7 396 29.3
AagrBONN_evm.TU.Sc2ySwM_203.1 Anthoceros agrestis HOM05D003156 ORTHO05D003508 2.1e-28 131.7 349 30.4
AagrBONN_evm.TU.Sc2ySwM_351.7 Anthoceros agrestis HOM05D003156 ORTHO05D003508 2.1e-28 131.7 349 30.4
Psat7g135120 Pisum sativum HOM05D003156 ORTHO05D003508 2.3e-27 128.3 92 64.1
VMungo0464G1901 Vigna mungo HOM05D003156 ORTHO05D003508 2.3e-27 128.3 201 42.3
AagrBONN_evm.TU.Sc2ySwM_185.8 Anthoceros agrestis HOM05D003156 ORTHO05D003508 1.2e-26 125.9 348 29.9
Pp3c12_21290 Physcomitrium patens HOM05D003156 ORTHO05D003508 8.3e-25 119.8 340 30.3
Pp3c12_21500 Physcomitrium patens HOM05D003156 ORTHO05D003508 1.2e-23 115.9 340 30.0
Actinidia08030 Actinidia chinensis HOM05D003156 ORTHO05D003508 2.1e-23 115.2 581 26.7
BcaC07g39597 Brassica carinata HOM05D003156 ORTHO05D003508 6.0e-23 113.6 289 32.5
Actinidia03045 Actinidia chinensis HOM05D003156 ORTHO05D003508 7.8e-23 113.2 84 65.5
AagrBONN_evm.TU.Sc2ySwM_351.4 Anthoceros agrestis HOM05D003156 ORTHO05D003508 7.3e-21 106.7 147 44.2
Actinidia08029 Actinidia chinensis HOM05D003156 ORTHO05D003508 3.1e-19 101.3 71 66.2
Medtr6g033345 Medicago truncatula HOM05D003156 ORTHO05D003508 6.8e-19 100.1 160 38.8
Actinidia03044 Actinidia chinensis HOM05D003156 ORTHO05D003508 4.9e-17 94.0 116 42.2
CBR_g49682 Chara braunii HOM05D000785 ORTHO05D000231 1.4e-16 92.4 99 48.5
Hma1.2p1_1203F.1_g266910 Hydrangea macrophylla HOM05D003156 ORTHO05D003508 3.2e-16 91.3 90 51.1
SMO361G0003 Selaginella moellendorffii HOM05D003156 ORTHO05D003508 3.5e-15 87.8 70 54.3
SMO361G0517 Selaginella moellendorffii HOM05D003156 ORTHO05D003508 3.5e-15 87.8 70 54.3
AagrBONN_evm.TU.Sc2ySwM_186.2 Anthoceros agrestis HOM05D003156 ORTHO05D003508 8.6e-14 83.2 319 26.0
MCO13G549 Micromonas commoda HOM05D003156 ORTHO05D003508 1.1e-13 82.8 100 40.0
Cre06.g264400 Chlamydomonas reinhardtii HOM05D003156 ORTHO05D003508 1.8e-11 75.5 104 39.4
AagrBONN_evm.TU.Sc2ySwM_25.2 Anthoceros agrestis HOM05D003156 ORTHO05D003508 2.4e-11 75.1 68 48.5


User provided reference genes

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