Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16728 Utricularia gibba HOM05D006001 ORTHO05D006714 9.0e-168 593.6 315 100.0
Migut.C00706 Erythranthe guttata HOM05D006001 ORTHO05D006714 9.4e-40 168.3 343 41.4
SGA_v2.0_scaffold24G10238 Striga asiatica HOM05D006001 ORTHO05D006714 6.1e-39 165.6 326 37.7
Oeu063699.1 Olea europaea HOM05D006001 ORTHO05D006714 2.5e-37 160.2 359 35.9
SGA_v2.0_scaffold20G09128 Striga asiatica HOM05D006001 ORTHO05D006714 8.5e-33 145.2 327 34.3
SalBow7G4402 Salvia bowleyana HOM05D006001 ORTHO05D006714 1.4e-32 144.4 387 36.7
Oeu034401.1 Olea europaea HOM05D006001 ORTHO05D006714 1.4e-30 137.9 385 32.5
Dinv42605 Davidia involucrata HOM05D006001 ORTHO05D006714 2.0e-26 124.0 361 34.3
Sopen04g030170 Solanum pennellii HOM05D006001 ORTHO05D006714 3.8e-25 119.8 325 36.0
PGSC0003DMG400009339 Solanum tuberosum HOM05D006001 ORTHO05D006714 1.9e-24 117.5 324 35.8
Peaxi162Scf00160g00103 Petunia axillaris HOM05D006001 ORTHO05D006714 6.1e-23 112.5 388 31.2
Solyc04g076410.3 Solanum lycopersicum HOM05D006001 ORTHO05D006714 6.1e-23 112.5 316 34.8
GSVIVG01009188001 Vitis vinifera HOM05D006001 ORTHO05D006714 2.3e-22 110.5 380 30.8
CAN.G1700.2 Capsicum annuum HOM05D006001 ORTHO05D006714 2.0e-21 107.5 350 29.4
PSO210G5625 Papaver somniferum HOM05D006001 ORTHO05D006714 7.4e-21 105.5 340 30.9
Nitab4.5_0000354g0120 Nicotiana tabacum HOM05D006001 ORTHO05D006714 1.7e-20 104.4 351 30.2
Carub.0007s1657 Capsella rubella HOM05D006001 ORTHO05D006714 2.2e-20 104.0 350 31.7
Eucgr.H00032 Eucalyptus grandis HOM05D006001 ORTHO05D006714 6.3e-20 102.4 354 32.2
Eucgr.L02666 Eucalyptus grandis HOM05D006001 ORTHO05D006714 8.2e-20 102.1 354 32.2
Actinidia19626 Actinidia chinensis HOM05D006001 ORTHO05D006714 7.0e-19 99.0 387 35.9
Glyma.02G215100 Glycine max HOM05D006001 ORTHO05D006714 7.0e-19 99.0 348 29.0
Thecc.08G071800 Theobroma cacao HOM05D006001 ORTHO05D006714 7.0e-19 99.0 375 29.9
AT4G24500 Arabidopsis thaliana HOM05D006001 ORTHO05D006714 9.1e-19 98.6 340 31.5
A01p15870 Brassica napus HOM05D002298 ORTHO05D006714 9.1e-19 98.6 332 30.7
BcaC09g50862 Brassica carinata HOM05D006001 ORTHO05D006714 1.2e-18 98.2 335 30.4
TAR381G0479 Trochodendron aralioides HOM05D006001 ORTHO05D006714 1.2e-18 98.2 358 29.6
BolC1t01909H Brassica oleracea HOM05D002298 ORTHO05D006714 1.6e-18 97.8 336 30.7
Manes.18G058066 Manihot esculenta HOM05D006001 ORTHO05D006714 2.0e-18 97.4 349 30.7
PSO170G4643 Papaver somniferum HOM05D006001 ORTHO05D006714 2.0e-18 97.4 325 31.4
Duzib128G1071 Durio zibethinus HOM05D006001 ORTHO05D006714 3.5e-18 96.7 383 29.8
Nn6g34170 Nelumbo nucifera HOM05D006001 ORTHO05D006714 3.5e-18 96.7 361 28.8
Duzib106G1137 Durio zibethinus HOM05D006001 ORTHO05D006714 4.5e-18 96.3 379 29.3
Lsat_1_v5_gn_3_133380 Lactuca sativa HOM05D006001 ORTHO05D006714 4.5e-18 96.3 354 29.4
C01p19810 Brassica napus HOM05D002298 ORTHO05D006714 1.0e-17 95.1 336 30.4
PGSC0003DMG400002050 Solanum tuberosum HOM05D006001 ORTHO05D006714 1.3e-17 94.7 350 28.9
CSS0018086 Camellia sinensis var. sinensis HOM05D006001 ORTHO05D006714 2.2e-17 94.0 388 33.2
Cpa.g.c29936.2 Carica papaya HOM05D006001 ORTHO05D006714 2.9e-17 93.6 378 29.4
CsaV3_2G036230 Cucumis sativus L. HOM05D006001 ORTHO05D006714 6.5e-17 92.4 334 31.7
CiPaw.03G148200 Carya illinoinensis HOM05D006001 ORTHO05D006714 1.1e-16 91.7 358 36.6
DCAR_023481 Daucus carota HOM05D006001 ORTHO05D006714 1.5e-16 91.3 411 28.2
QL09p017955 Quercus lobata HOM05D006001 ORTHO05D006714 1.9e-16 90.9 362 29.0
QL12p023212 Quercus lobata HOM05D006001 ORTHO05D006714 2.5e-16 90.5 350 33.1
Sabra02G0088000 Salix brachista HOM05D006001 ORTHO05D006714 2.5e-16 90.5 355 29.9
Ciclev10001506m.g Citrus clementina HOM05D006001 ORTHO05D006714 5.5e-16 89.4 395 29.4
Potri.002G111500 Populus trichocarpa HOM05D006001 ORTHO05D006714 5.5e-16 89.4 350 30.9
Sopen12g030020 Solanum pennellii HOM05D006001 ORTHO05D006714 7.2e-16 89.0 351 27.6
BraA01t01521Z Brassica rapa HOM05D002298 ORTHO05D006714 9.4e-16 88.6 333 29.4
THA.LOC104806890 Tarenaya hassleriana HOM05D006001 ORTHO05D006714 1.2e-15 88.2 338 28.1
HanXRQChr03g0093751 Helianthus annuus HOM05D006001 ORTHO05D006714 1.6e-15 87.8 326 29.4
Gohir.A05G320600 Gossypium hirsutum HOM05D006001 ORTHO05D006714 2.1e-15 87.4 348 31.0
Medtr5g066450 Medicago truncatula HOM05D006001 ORTHO05D006714 2.1e-15 87.4 342 31.6
Gorai.009G346500 Gossypium raimondii HOM05D006001 ORTHO05D006714 3.6e-15 86.7 352 30.7
arahy.Tifrunner.gnm1.ann1.5459VI Arachis hypogaea HOM05D006001 ORTHO05D006714 4.7e-15 86.3 338 30.8
Psat2g065160 Pisum sativum HOM05D006001 ORTHO05D006714 4.7e-15 86.3 352 28.7
Ca_05452_v3 Cicer arietinum L. HOM05D006001 ORTHO05D006714 6.1e-15 85.9 343 29.4
Haze_22467 Corylus avellana HOM05D006001 ORTHO05D006714 8.0e-15 85.5 373 29.8
Rhsim07G0212300 Rhododendron simsii HOM05D006001 ORTHO05D006714 8.0e-15 85.5 395 34.7
MELO3C008828.2 Cucumis melo HOM05D006001 ORTHO05D006714 1.4e-14 84.7 335 30.1
Sc04g0007160 Simmondsia chinensis HOM05D006001 ORTHO05D006714 1.4e-14 84.7 321 28.7
Sp7g22490 Schrenkiella parvula HOM05D006001 ORTHO05D006714 1.8e-14 84.3 334 30.5
Cc00_g15770 Coffea canephora HOM05D006001 ORTHO05D006714 2.3e-14 84.0 368 34.5
Thhalv10025760m.g Eutrema salsugineum HOM05D006001 ORTHO05D006714 2.3e-14 84.0 330 30.3
Nitab4.5_0019796g0010 Nicotiana tabacum HOM05D006001 ORTHO05D006714 2.3e-14 84.0 100 47.0
PGR042G0630 Punica granatum HOM05D006001 ORTHO05D006714 2.3e-14 84.0 335 27.5
AL7G28720 Arabidopsis lyrata HOM05D006001 ORTHO05D006714 3.0e-14 83.6 339 28.9
MELO3C021835.2 Cucumis melo HOM05D006001 ORTHO05D006714 4.0e-14 83.2 355 29.0
CARHR231890 Cardamine hirsuta HOM05D006001 ORTHO05D006714 5.2e-14 82.8 363 30.0
TWI12G0152 Tripterygium wilfordii HOM05D006001 ORTHO05D006714 5.2e-14 82.8 287 28.2
Cfa013804 Carpinus fangiana HOM05D006001 ORTHO05D006714 1.2e-13 81.6 375 29.3
TWI56G0486 Tripterygium wilfordii HOM05D006001 ORTHO05D006714 1.5e-13 81.3 363 27.5
COL.COLO4_35255 Corchorus olitorius HOM05D006001 ORTHO05D006714 2.6e-13 80.5 374 28.9
Gohir.D05G322800 Gossypium hirsutum HOM05D006001 ORTHO05D006714 3.3e-13 80.1 362 30.1
BcaC06g32880 Brassica carinata HOM05D006001 ORTHO05D006714 4.4e-13 79.7 321 30.2
Haze_22468 Corylus avellana HOM05D006001 ORTHO05D006714 4.4e-13 79.7 378 28.0
MBI16_g12475_MAGBIO Magnolia biondii HOM05D006001 ORTHO05D006714 7.5e-13 79.0 345 35.4
Atru.chr13.1002 Acer truncatum HOM05D006001 ORTHO05D006714 9.7e-13 78.6 364 27.5
Potri.005G153300 Populus trichocarpa HOM05D006001 ORTHO05D006714 2.2e-12 77.4 335 31.3
A03p55330 Brassica napus HOM05D006001 ORTHO05D006714 3.7e-12 76.6 347 28.8
Glyma.14G182400 Glycine max HOM05D006001 ORTHO05D006714 3.7e-12 76.6 361 25.5
Lj4A738G22 Lonicera japonica HOM05D006001 ORTHO05D006714 4.8e-12 76.3 425 25.4
LjContig00408g0013719 Lotus japonicus HOM05D006001 ORTHO05D006714 4.8e-12 76.3 364 27.7
ClCG09G016810 Citrullus lanatus HOM05D006001 ORTHO05D006714 6.3e-12 75.9 353 27.8
Nitab4.5_0000131g0110 Nicotiana tabacum HOM05D006001 ORTHO05D006714 1.4e-11 74.7 320 30.3
Hund26817 Selenicereus undatus HOM05D006001 ORTHO05D006714 2.4e-11 73.9 348 27.3
HPP92_021096 Vanilla planifolia HOM05D006001 ORTHO05D006714 7.0e-11 72.4 338 29.3
Aa31LG4G9600 Aethionema arabicum HOM05D006001 ORTHO05D006714 9.1e-11 72.0 345 27.8
arahy.Tifrunner.gnm1.ann1.X0SJ4P Arachis hypogaea HOM05D006001 ORTHO05D006714 3.5e-10 70.1 351 28.2
BraA03t14592Z Brassica rapa HOM05D006001 ORTHO05D006714 1.0e-09 68.6 345 30.1
CANSAT11G1699 Cannabis sativa HOM05D006001 ORTHO05D006714 1.3e-09 68.2 336 26.5
CDE04G0496 Ceratophyllum demersum HOM05D006001 ORTHO05D006714 2.9e-09 67.0 332 28.6
BolC7t45854H Brassica oleracea HOM05D006001 ORTHO05D006714 6.5e-09 65.9 352 27.3
ATR0767G016 Amborella trichopoda HOM05D006001 ORTHO05D006714 8.5e-09 65.5 385 27.8
Sed0021215 Sechium edule HOM05D006001 ORTHO05D006714 8.5e-09 65.5 127 39.4
TPR.G34712 Trifolium pratense HOM05D006001 ORTHO05D006714 8.5e-09 65.5 341 32.0
ECA240G2279 Erigeron canadensis HOM05D006001 ORTHO05D006714 1.9e-08 64.3 359 31.8
Peaxi162Scf00454g00211 Petunia axillaris HOM05D006001 ORTHO05D006714 1.9e-08 64.3 318 28.6
CiPaw.07G164600 Carya illinoinensis HOM05D006001 ORTHO05D006714 2.5e-08 63.9 350 26.6
Prupe.1G533200 Prunus persica HOM05D006001 ORTHO05D006714 4.2e-08 63.2 426 25.1
Lalb_Chr17g0344581 Lupinus albus HOM05D006001 ORTHO05D006714 1.0e-06 58.5 325 32.3
DCAR_002596 Daucus carota HOM05D006001 ORTHO05D006714 1.4e-06 58.2 102 43.1
FAN18G3411 Fragaria x ananassa HOM05D006001 ORTHO05D006714 5.2e-06 56.2 90 41.1
CAN.G475.17 Capsicum annuum HOM05D006001 ORTHO05D006714 6.8e-06 55.8 72 48.6
CDE06G1720 Ceratophyllum demersum HOM05D006001 ORTHO05D006714 6.8e-06 55.8 105 41.9
CDE06G2159 Ceratophyllum demersum HOM05D006001 ORTHO05D006714 6.8e-06 55.8 89 38.2
SHI11237 Sapria himalayana HOM05D006001 ORTHO05D006714 6.8e-06 55.8 73 39.7
VMungo1127G1493 Vigna mungo HOM05D006001 ORTHO05D006714 8.8e-06 55.5 129 31.0


User provided reference genes

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