Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16582 Utricularia gibba HOM05D005966 ORTHO05D007584 0.0e+00 1122.1 574 100.0
SGA_v2.0_scaffold163G38051 Striga asiatica HOM05D005966 ORTHO05D007584 8.1e-191 671.0 664 54.7
MSTRG.14036 Avicennia marina HOM05D005966 ORTHO05D007584 4.3e-184 648.7 666 53.9
Migut.E01544 Erythranthe guttata HOM05D005966 ORTHO05D007584 1.3e-180 637.1 660 53.8
SalBow1G1471 Salvia bowleyana HOM05D005966 ORTHO05D007584 1.1e-176 624.0 742 47.6
Dinv36541 Davidia involucrata HOM05D005966 ORTHO05D007584 3.8e-164 582.4 664 48.9
Oeu018459.1 Olea europaea HOM05D005966 ORTHO05D007584 5.1e-161 572.0 643 49.6
Oeu021589.1 Olea europaea HOM05D005966 ORTHO05D007584 8.7e-161 571.2 630 50.2
Actinidia07431 Actinidia chinensis HOM05D005966 ORTHO05D007584 5.3e-158 562.0 654 48.8
Sopen12g002600 Solanum pennellii HOM05D005966 ORTHO05D007584 2.2e-156 556.6 665 48.0
Solyc12g006650.2 Solanum lycopersicum HOM05D005966 ORTHO05D007584 2.9e-156 556.2 665 47.8
PGSC0003DMG400020667 Solanum tuberosum HOM05D005966 ORTHO05D007584 3.8e-156 555.8 661 48.6
Nitab4.5_0007523g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 7.2e-155 551.6 666 47.4
CAN.G377.10 Capsicum annuum HOM05D005966 ORTHO05D007584 3.6e-154 549.3 662 47.9
Cc06_g08730 Coffea canephora HOM05D005966 ORTHO05D007584 3.6e-154 549.3 658 45.7
vmacro06121 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 4.6e-154 548.9 680 45.9
vmacro06181 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 4.6e-154 548.9 680 45.9
Nitab4.5_0010819g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 6.1e-154 548.5 673 47.1
Manes.06G049700 Manihot esculenta HOM05D005966 ORTHO05D007584 4.3e-152 542.3 624 48.4
CiPaw.04G170200 Carya illinoinensis HOM05D005966 ORTHO05D007584 7.4e-152 541.6 658 47.0
CANSAT11G2564 Cannabis sativa HOM05D005966 ORTHO05D007584 1.5e-149 533.9 656 47.9
Actinidia26399 Actinidia chinensis HOM05D005966 ORTHO05D007584 2.6e-149 533.1 670 46.4
Hma1.2p1_0018F.1_g012590 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 4.5e-149 532.3 657 44.9
MD15G1175600 Malus domestica HOM05D005966 ORTHO05D007584 2.9e-148 529.6 662 47.0
Prupe.7G240500 Prunus persica HOM05D005966 ORTHO05D007584 6.5e-148 528.5 661 47.0
Nn2g12002 Nelumbo nucifera HOM05D005966 ORTHO05D007584 8.5e-148 528.1 663 45.4
Peaxi162Scf00984g00027 Petunia axillaris HOM05D005966 ORTHO05D007584 2.5e-147 526.6 637 47.9
GSVIVG01015509001 Vitis vinifera HOM05D005966 ORTHO05D007584 4.2e-147 525.8 660 46.2
Atru.chr7.1212 Acer truncatum HOM05D005966 ORTHO05D007584 6.1e-146 521.9 660 45.9
FvH4_5g23630 Fragaria vesca HOM05D005966 ORTHO05D007584 2.3e-145 520.0 659 45.8
Potri.015G057100 Populus trichocarpa HOM05D005966 ORTHO05D007584 1.1e-144 517.7 667 45.0
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.5e-144 517.3 659 45.5
FAN13G2896 Fragaria x ananassa HOM05D005966 ORTHO05D007584 2.6e-144 516.5 659 45.7
Haze_25609 Corylus avellana HOM05D005966 ORTHO05D007584 4.4e-144 515.8 668 44.6
RcHm_v2.0_Chr7g0212931 Rosa chinensis HOM05D005966 ORTHO05D007584 4.4e-144 515.8 656 45.3
HanXRQChr04g0104201 Helianthus annuus HOM05D005966 ORTHO05D007584 1.7e-143 513.8 656 44.8
Cfa003353 Carpinus fangiana HOM05D005966 ORTHO05D007584 4.8e-143 512.3 654 45.1
ECA236G0249 Erigeron canadensis HOM05D005966 ORTHO05D007584 4.8e-143 512.3 658 45.0
Lsat_1_v5_gn_8_59020 Lactuca sativa HOM05D005966 ORTHO05D007584 1.2e-141 507.7 668 43.4
CSS0033485 Camellia sinensis var. sinensis HOM05D005966 ORTHO05D007584 7.7e-141 505.0 670 44.5
Lj7C631G5 Lonicera japonica HOM05D005966 ORTHO05D007584 1.7e-140 503.8 758 41.0
ClCG08G000940 Citrullus lanatus HOM05D005966 ORTHO05D007584 1.9e-139 500.4 658 45.1
CsaV3_5G040100 Cucumis sativus L. HOM05D005966 ORTHO05D007584 2.5e-139 500.0 658 45.1
Thecc.09G123800 Theobroma cacao HOM05D005966 ORTHO05D007584 2.5e-139 500.0 663 43.7
DCAR_014873 Daucus carota HOM05D005966 ORTHO05D007584 5.5e-139 498.8 662 44.3
Sed0002176 Sechium edule HOM05D005966 ORTHO05D007584 5.5e-139 498.8 656 45.0
Ciclev10007689m.g Citrus clementina HOM05D005966 ORTHO05D007584 1.2e-138 497.7 661 44.6
Rhsim03G0247300 Rhododendron simsii HOM05D005966 ORTHO05D007584 7.9e-138 495.0 523 51.4
Gorai.001G041100 Gossypium raimondii HOM05D005966 ORTHO05D007584 1.4e-137 494.2 661 43.9
Eucgr.C04186 Eucalyptus grandis HOM05D005966 ORTHO05D007584 1.8e-137 493.8 650 42.9
FAN18G2691 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.8e-137 493.8 639 45.2
Gohir.A07G035000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.8e-137 493.8 659 43.6
Duzib187G1826 Durio zibethinus HOM05D005966 ORTHO05D007584 2.3e-137 493.4 660 43.2
Sabra15G0082400 Salix brachista HOM05D005966 ORTHO05D007584 3.0e-137 493.0 662 43.2
MELO3C022187.2 Cucumis melo HOM05D005966 ORTHO05D007584 6.7e-137 491.9 658 44.7
Psat4g039400 Pisum sativum HOM05D005966 ORTHO05D007584 5.7e-136 488.8 655 43.2
PGR102G3358 Punica granatum HOM05D005966 ORTHO05D007584 1.3e-135 487.6 661 42.8
arahy.Tifrunner.gnm1.ann1.QB31BF Arachis hypogaea HOM05D005966 ORTHO05D007584 2.4e-134 483.4 653 43.0
Gohir.D05G018700 Gossypium hirsutum HOM05D005966 ORTHO05D007584 2.4e-134 483.4 630 44.4
Lalb_Chr07g0178861 Lupinus albus HOM05D005966 ORTHO05D007584 7.0e-134 481.9 654 43.6
Phvul.003G161800 Phaseolus vulgaris HOM05D005966 ORTHO05D007584 1.6e-133 480.7 655 43.8
VMungo1215G0752 Vigna mungo HOM05D005966 ORTHO05D007584 1.6e-133 480.7 655 43.5
Lj4g0014642 Lotus japonicus HOM05D005966 ORTHO05D007584 3.5e-133 479.6 655 44.0
Glyma.05G009700 Glycine max HOM05D005966 ORTHO05D007584 7.7e-133 478.4 651 43.8
arahy.Tifrunner.gnm1.ann1.Z0FLIL Arachis hypogaea HOM05D005966 ORTHO05D007584 1.0e-132 478.0 665 42.3
TPR.G10691 Trifolium pratense HOM05D005966 ORTHO05D007584 1.0e-132 478.0 660 43.6
PSO170G3915 Papaver somniferum HOM05D005966 ORTHO05D007584 1.3e-132 477.6 656 42.5
Aa31LG1G14440 Aethionema arabicum HOM05D005966 ORTHO05D007584 2.2e-132 476.9 659 43.4
Glyma.17G117600 Glycine max HOM05D005966 ORTHO05D007584 2.2e-132 476.9 656 43.3
Medtr4g114100 Medicago truncatula HOM05D005966 ORTHO05D007584 1.9e-131 473.8 652 42.8
PSO455G0207 Papaver somniferum HOM05D005966 ORTHO05D007584 2.5e-131 473.4 656 41.8
THA.LOC104799647 Tarenaya hassleriana HOM05D005966 ORTHO05D007584 1.2e-130 471.1 654 43.6
Gorai.009G019100 Gossypium raimondii HOM05D005966 ORTHO05D007584 1.6e-130 470.7 668 42.2
Ca_21691_v3 Cicer arietinum L. HOM05D005966 ORTHO05D007584 2.1e-130 470.3 651 43.0
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 2.1e-130 470.3 622 43.4
Gohir.A05G017800 Gossypium hirsutum HOM05D005966 ORTHO05D007584 2.3e-129 466.8 668 42.7
A03p09900 Brassica napus HOM05D005966 ORTHO05D007584 3.0e-129 466.5 648 41.5
C03p11480 Brassica napus HOM05D005966 ORTHO05D007584 4.4e-128 462.6 648 40.9
Sabra15G0082900 Salix brachista HOM05D005966 ORTHO05D007584 7.5e-128 461.8 667 42.0
Sp6g24230 Schrenkiella parvula HOM05D005966 ORTHO05D007584 9.7e-128 461.5 647 41.6
BolC3t13620H Brassica oleracea HOM05D005966 ORTHO05D007584 2.2e-127 460.3 649 40.7
Thhalv10012923m.g Eutrema salsugineum HOM05D005966 ORTHO05D007584 3.7e-127 459.5 654 40.8
AUR62033484 Chenopodium quinoa HOM05D005966 ORTHO05D007584 1.1e-126 458.0 649 42.1
Aqoxy5G00491 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 1.8e-126 457.2 663 40.7
Hund26492 Selenicereus undatus HOM05D005966 ORTHO05D007584 9.1e-126 454.9 649 43.0
AUR62011094 Chenopodium quinoa HOM05D005966 ORTHO05D007584 2.7e-125 453.4 649 41.8
Carub.0006s1857 Capsella rubella HOM05D005966 ORTHO05D007584 1.7e-124 450.7 651 40.4
CARHR192650 Cardamine hirsuta HOM05D005966 ORTHO05D007584 2.2e-124 450.3 648 40.6
BraA03t10303Z Brassica rapa HOM05D005966 ORTHO05D007584 5.0e-124 449.1 647 40.5
Gohir.D07G039000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 8.5e-124 448.4 652 41.4
AL6G31730 Arabidopsis lyrata HOM05D005966 ORTHO05D007584 1.5e-123 447.6 649 40.1
AT5G20170 Arabidopsis thaliana HOM05D005966 ORTHO05D007584 4.2e-123 446.0 653 40.0
HPP92_009844 Vanilla planifolia HOM05D005966 ORTHO05D007584 8.8e-121 438.3 661 39.5
QL02p087915 Quercus lobata HOM05D005966 ORTHO05D007584 9.5e-115 418.3 494 47.2
EL10Ac8g18623 Beta vulgaris HOM05D005966 ORTHO05D007584 3.6e-114 416.4 651 39.3
Cpa.g.sc75.51 Carica papaya HOM05D005966 ORTHO05D007584 1.4e-113 414.5 492 45.3
ATR1156G034 Amborella trichopoda HOM05D005966 ORTHO05D007584 2.0e-109 400.6 671 39.3
Ah.14g080180 Amaranthus hybridus HOM05D005966 ORTHO05D007584 1.7e-108 397.5 607 39.9
Os12g0638600 Oryza sativa ssp. japonica HOM05D005966 ORTHO05D007584 2.3e-108 397.1 657 37.1
CDE01G0041 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 5.2e-105 386.0 527 43.5
Sc08g0006730 Simmondsia chinensis HOM05D005966 ORTHO05D007584 8.3e-103 378.6 523 42.1
MD02G1034800 Malus domestica HOM05D005966 ORTHO05D007584 1.1e-102 378.3 677 37.5
Zm00001eb207940 Zea mays HOM05D005966 ORTHO05D007584 8.0e-98 362.1 654 34.6
Zm00001eb334260 Zea mays HOM05D005966 ORTHO05D007584 1.3e-95 354.8 524 40.8
SEGI_37567 Sequoiadendron giganteum HOM05D005966 ORTHO05D007584 1.5e-91 341.3 711 33.8
COL.COLO4_05778 Corchorus olitorius HOM05D005966 ORTHO05D007584 2.5e-59 234.2 348 41.7
SHI18656 Sapria himalayana HOM05D005966 ORTHO05D007584 2.1e-58 231.1 528 32.2
Glyma.14G007400 Glycine max HOM05D005966 ORTHO05D007584 9.6e-51 205.7 294 41.5
Mapoly0010s0026 Marchantia polymorpha HOM05D005966 ORTHO05D007584 2.8e-50 204.1 715 27.1
SMO200G0046 Selaginella moellendorffii HOM05D005966 ORTHO05D007584 1.9e-43 181.4 635 27.1
Pp3c3_25450 Physcomitrium patens HOM05D005966 ORTHO05D007584 5.7e-43 179.9 654 26.1
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 1.8e-25 121.7 171 39.2
AagrBONN_evm.TU.Sc2ySwM_117.630 Anthoceros agrestis HOM05D005966 ORTHO05D007584 9.4e-22 109.4 464 25.6
TAR625G1387 Trochodendron aralioides HOM05D005966 ORTHO05D007584 5.7e-19 100.1 373 26.3
FAN08G0676 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.3e-18 99.0 164 38.4
Cpa.g.sc75.52 Carica papaya HOM05D005966 ORTHO05D007584 4.5e-16 90.5 55 72.7
COL.COLO4_05779 Corchorus olitorius HOM05D005966 ORTHO05D007584 3.8e-15 87.4 54 70.4
Sc08g0006740 Simmondsia chinensis HOM05D005966 ORTHO05D007584 3.8e-15 87.4 67 61.2
Hma1.2p1_0090F.1_g045710 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 8.5e-15 86.3 96 43.8
GSVIVG01027692001 Vitis vinifera HOM05D005966 ORTHO05D007584 2.1e-13 81.6 69 60.9
Lsat_1_v5_gn_8_82580 Lactuca sativa HOM05D005966 ORTHO05D007584 3.6e-13 80.9 51 72.5
CAN.G925.3 Capsicum annuum HOM05D005966 ORTHO05D007584 5.2e-12 77.0 70 54.3
CAN.G1289.8 Capsicum annuum HOM05D005966 ORTHO05D007584 6.3e-10 70.1 49 61.2
CBR_g48370 Chara braunii HOM05D005966 ORTHO05D000048 1.6e-08 65.5 103 38.8


User provided reference genes

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