Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16524 Utricularia gibba HOM05D002704 ORTHO05D002891 2.3e-90 335.5 166 100.0
unitig_8.g4838 Utricularia gibba HOM05D002704 ORTHO05D002891 1.8e-37 159.8 207 46.9
unitig_578.g16200 Utricularia gibba HOM05D002704 ORTHO05D002891 8.1e-35 151.0 201 47.8
MSTRG.22153 Avicennia marina HOM05D002704 ORTHO05D002891 1.4e-31 140.2 203 46.3
MSTRG.24460 Avicennia marina HOM05D002704 ORTHO05D002891 3.3e-28 129.0 195 44.6
Dinv44770 Davidia involucrata HOM05D002704 ORTHO05D002891 1.6e-27 126.7 145 53.1
Oeu012923.1 Olea europaea HOM05D002704 ORTHO05D002891 2.0e-25 119.8 194 41.2
Hma1.2p1_0237F.1_g099460 Hydrangea macrophylla HOM05D002704 ORTHO05D002891 4.5e-25 118.6 213 41.3
TAR628G0302 Trochodendron aralioides HOM05D002704 ORTHO05D002891 2.2e-24 116.3 212 39.2
Dinv14325 Davidia involucrata HOM05D002704 ORTHO05D002891 1.9e-23 113.2 146 47.3
MBI05_g19349_MAGBIO Magnolia biondii HOM05D002704 ORTHO05D002891 2.5e-23 112.8 204 38.2
Peaxi162Scf00041g00165 Petunia axillaris HOM05D002704 ORTHO05D002891 3.2e-23 112.5 135 49.6
GSVIVG01009025001 Vitis vinifera HOM05D002704 ORTHO05D002891 3.2e-23 112.5 192 41.7
CSS0027836 Camellia sinensis var. sinensis HOM05D002704 ORTHO05D002891 9.3e-23 110.9 151 47.0
Manes.18G067800 Manihot esculenta HOM05D002704 ORTHO05D002891 9.3e-23 110.9 201 37.8
Lsat_1_v5_gn_9_41620 Lactuca sativa HOM05D002704 ORTHO05D002891 1.6e-22 110.2 136 47.8
Nitab4.5_0000421g0060 Nicotiana tabacum HOM05D002704 ORTHO05D002891 2.7e-22 109.4 182 42.3
Nitab4.5_0002098g0040 Nicotiana tabacum HOM05D002704 ORTHO05D002891 2.7e-22 109.4 169 43.8
Oeu046295.1 Olea europaea HOM05D002704 ORTHO05D002891 6.1e-22 108.2 142 49.3
Actinidia10319 Actinidia chinensis HOM05D002704 ORTHO05D002891 7.9e-22 107.8 144 50.0
Lj4C103T16 Lonicera japonica HOM05D002704 ORTHO05D002891 7.9e-22 107.8 176 42.0
TAR625G1386 Trochodendron aralioides HOM05D002704 ORTHO05D002891 1.8e-21 106.7 190 38.4
Solyc04g074080.3 Solanum lycopersicum HOM05D002704 ORTHO05D002891 3.0e-21 105.9 128 50.8
Aqoxy6G00791 Aquilegia oxysepala HOM05D002704 ORTHO05D002891 3.9e-21 105.5 124 46.8
PGSC0003DMG400006402 Solanum tuberosum HOM05D002704 ORTHO05D002891 1.1e-20 104.0 180 41.1
DCAR_029361 Daucus carota HOM05D002704 ORTHO05D002891 1.5e-20 103.6 125 47.2
Nn5g30117 Nelumbo nucifera HOM05D002704 ORTHO05D002891 2.5e-20 102.8 194 34.0
Ciclev10002416m.g Citrus clementina HOM05D002704 ORTHO05D002891 3.3e-20 102.4 146 43.8
CAN.G101.15 Capsicum annuum HOM05D002704 ORTHO05D002891 5.7e-20 101.7 123 46.3
HanXRQChr15g0491861 Helianthus annuus HOM05D002704 ORTHO05D002891 5.7e-20 101.7 144 44.4
Nitab4.5_0005777g0010 Nicotiana tabacum HOM05D002704 ORTHO05D002891 7.4e-20 101.3 176 42.0
Actinidia27183 Actinidia chinensis HOM05D002704 ORTHO05D002891 9.7e-20 100.9 138 46.4
Cpa.g.sc36.127 Carica papaya HOM05D002704 ORTHO05D002891 9.7e-20 100.9 222 37.4
CiPaw.08G044800 Carya illinoinensis HOM05D002704 ORTHO05D002891 9.7e-20 100.9 142 43.0
Cc10_g07250 Coffea canephora HOM05D002704 ORTHO05D002891 1.3e-19 100.5 158 41.8
QL12p036715 Quercus lobata HOM05D002704 ORTHO05D002891 1.3e-19 100.5 131 45.8
Duzib093G0662 Durio zibethinus HOM05D002704 ORTHO05D002891 6.3e-19 98.2 146 43.8
Nitab4.5_0000232g0230 Nicotiana tabacum HOM05D002704 ORTHO05D002891 6.3e-19 98.2 183 40.4
TAR381G1126 Trochodendron aralioides HOM05D002704 ORTHO05D002891 1.1e-18 97.4 154 39.6
Atru.chr13.1197 Acer truncatum HOM05D002704 ORTHO05D002891 1.4e-18 97.1 146 43.2
Thecc.08G107400 Theobroma cacao HOM05D002704 ORTHO05D002891 1.8e-18 96.7 144 43.1
Potri.005G165300 Populus trichocarpa HOM05D002704 ORTHO05D002891 2.4e-18 96.3 184 37.0
Duzib116G0617 Durio zibethinus HOM05D002704 ORTHO05D002891 3.1e-18 95.9 144 44.4
Gorai.009G237500 Gossypium raimondii HOM05D002704 ORTHO05D002891 4.1e-18 95.5 193 37.8
Manes.02G153000 Manihot esculenta HOM05D002704 ORTHO05D002891 4.1e-18 95.5 126 44.4
Gohir.A05G226700 Gossypium hirsutum HOM05D002704 ORTHO05D002891 5.3e-18 95.1 193 37.3
Gohir.D05G229400 Gossypium hirsutum HOM05D002704 ORTHO05D002891 2.0e-17 93.2 193 37.3
Potri.002G096100 Populus trichocarpa HOM05D002704 ORTHO05D002891 2.0e-17 93.2 146 40.4
TWI56G1046 Tripterygium wilfordii HOM05D002704 ORTHO05D002891 2.6e-17 92.8 137 41.6
TWI12G0499 Tripterygium wilfordii HOM05D002704 ORTHO05D002891 4.5e-17 92.0 137 41.6
Sabra02G0075700 Salix brachista HOM05D002704 ORTHO05D002891 5.9e-17 91.7 146 42.5
CDE04G0076 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 3.8e-16 89.0 135 40.0
Nn1g05351 Nelumbo nucifera HOM05D002704 ORTHO05D002891 5.0e-16 88.6 197 33.5
CiPaw.07G180300 Carya illinoinensis HOM05D002704 ORTHO05D002891 6.5e-16 88.2 202 37.6
Duzib041G0800 Durio zibethinus HOM05D002704 ORTHO05D002891 7.2e-15 84.7 195 35.9
Gohir.A02G076100 Gossypium hirsutum HOM05D002704 ORTHO05D002891 9.4e-15 84.3 157 37.6
Rhsim06G0082500 Rhododendron simsii HOM05D002704 ORTHO05D002891 1.2e-14 84.0 68 58.8
Hund16912 Selenicereus undatus HOM05D002704 ORTHO05D002891 2.1e-14 83.2 140 39.3
TPR.G34534 Trifolium pratense HOM05D002704 ORTHO05D002891 6.1e-14 81.6 145 37.9
COL.COLO4_16406 Corchorus olitorius HOM05D002704 ORTHO05D002891 7.9e-14 81.3 163 36.8
Glyma.04G102400 Glycine max HOM05D002704 ORTHO05D002891 1.4e-13 80.5 201 34.3
ClCG11G015290 Citrullus lanatus HOM05D002704 ORTHO05D002891 1.8e-13 80.1 125 40.0
PSO447G0371 Papaver somniferum HOM05D002704 ORTHO05D002891 2.3e-13 79.7 155 32.9
Phvul.009G030900 Phaseolus vulgaris HOM05D002704 ORTHO05D002891 3.0e-13 79.3 213 34.3
Ca_15248_v3 Cicer arietinum L. HOM05D002704 ORTHO05D002891 3.9e-13 79.0 207 32.9
Gohir.D02G083400 Gossypium hirsutum HOM05D002704 ORTHO05D002891 3.9e-13 79.0 140 37.1
Migut.N02898 Erythranthe guttata HOM05D002704 ORTHO05D002891 1.1e-12 77.4 178 35.4
Eucgr.B00020 Eucalyptus grandis HOM05D002704 ORTHO05D002891 1.1e-12 77.4 166 36.1
Medtr3g074450 Medicago truncatula HOM05D002704 ORTHO05D002891 1.1e-12 77.4 141 39.7
VMungo1309G0496 Vigna mungo HOM05D002704 ORTHO05D002891 1.1e-12 77.4 210 32.9
MELO3C003450.2 Cucumis melo HOM05D002704 ORTHO05D002891 1.5e-12 77.0 129 38.0
Glyma.13G088900 Glycine max HOM05D002704 ORTHO05D002891 1.5e-12 77.0 140 39.3
Gorai.005G094000 Gossypium raimondii HOM05D002704 ORTHO05D002891 1.5e-12 77.0 157 36.3
Lj1g0002648 Lotus japonicus HOM05D002704 ORTHO05D002891 1.5e-12 77.0 168 36.3
Glyma.06G103700 Glycine max HOM05D002704 ORTHO05D002891 2.0e-12 76.6 186 34.9
Psat5g138480 Pisum sativum HOM05D002704 ORTHO05D002891 2.5e-12 76.3 131 38.2
RcHm_v2.0_Chr7g0239041 Rosa chinensis HOM05D002704 ORTHO05D002891 2.5e-12 76.3 124 39.5
AUR62027750 Chenopodium quinoa HOM05D002704 ORTHO05D002891 3.3e-12 75.9 167 35.3
Eucgr.F02409 Eucalyptus grandis HOM05D002704 ORTHO05D002891 3.3e-12 75.9 167 35.3
THA.LOC104809714 Tarenaya hassleriana HOM05D002704 ORTHO05D002891 3.3e-12 75.9 129 42.6
AUR62038516 Chenopodium quinoa HOM05D002704 ORTHO05D002891 4.3e-12 75.5 162 34.0
Prupe.1G516300 Prunus persica HOM05D002704 ORTHO05D002891 4.3e-12 75.5 134 37.3
arahy.Tifrunner.gnm1.ann1.8HDV7G Arachis hypogaea HOM05D002704 ORTHO05D002891 5.7e-12 75.1 95 41.1
FAN08G2281 Fragaria x ananassa HOM05D002704 ORTHO05D002891 7.4e-12 74.7 125 40.0
Hund26960 Selenicereus undatus HOM05D002704 ORTHO05D002891 7.4e-12 74.7 206 31.6
vmacro21275 Vaccinium macrocarpon HOM05D002704 ORTHO05D002891 7.4e-12 74.7 57 59.6
PSO210G1059 Papaver somniferum HOM05D002704 ORTHO05D002891 9.7e-12 74.3 143 32.2
arahy.Tifrunner.gnm1.ann1.5JIN69 Arachis hypogaea HOM05D002704 ORTHO05D002891 1.3e-11 73.9 160 35.6
Sc23g0000210 Simmondsia chinensis HOM05D002704 ORTHO05D002891 1.3e-11 73.9 134 36.6
BcaB07g32247 Brassica carinata HOM05D002704 ORTHO05D002891 1.7e-11 73.6 112 42.0
FvH4_5g37370 Fragaria vesca HOM05D002704 ORTHO05D002891 1.7e-11 73.6 125 39.2
Aa31LG7G6190 Aethionema arabicum HOM05D002704 ORTHO05D002891 2.2e-11 73.2 113 42.5
AT1G78170 Arabidopsis thaliana HOM05D002704 ORTHO05D002891 2.2e-11 73.2 163 36.2
BcaB03g14223 Brassica carinata HOM05D002704 ORTHO05D002891 2.2e-11 73.2 102 41.2
BcaB03g14224 Brassica carinata HOM05D002704 ORTHO05D002891 2.2e-11 73.2 102 41.2
FAN04G1068 Fragaria x ananassa HOM05D002704 ORTHO05D002891 2.2e-11 73.2 125 39.2
THA.LOC104800151 Tarenaya hassleriana HOM05D002704 ORTHO05D002891 2.2e-11 73.2 141 39.0
Ca_05274_v3 Cicer arietinum L. HOM05D002704 ORTHO05D002891 2.8e-11 72.8 181 32.6
BcaB03g15984 Brassica carinata HOM05D002704 ORTHO05D002891 3.7e-11 72.4 150 36.7
FAN18G1803 Fragaria x ananassa HOM05D002704 ORTHO05D002891 3.7e-11 72.4 125 39.2
Glyma.14G172800 Glycine max HOM05D002704 ORTHO05D002891 3.7e-11 72.4 104 42.3
BcaB02g07152 Brassica carinata HOM05D002704 ORTHO05D002891 4.8e-11 72.0 116 40.5
BcaC08g47392 Brassica carinata HOM05D002704 ORTHO05D002891 4.8e-11 72.0 137 38.0
C06p52120 Brassica napus HOM05D002704 ORTHO05D002891 4.8e-11 72.0 137 38.0
BolC6t40235H Brassica oleracea HOM05D002704 ORTHO05D002891 4.8e-11 72.0 137 38.0
CsaV3_3G048710 Cucumis sativus L. HOM05D002704 ORTHO05D002891 4.8e-11 72.0 130 35.4
BraA07t30408Z Brassica rapa HOM05D002704 ORTHO05D002891 6.3e-11 71.6 103 41.7
FAN13G2774 Fragaria x ananassa HOM05D002704 ORTHO05D002891 6.3e-11 71.6 125 38.4
Lalb_Chr10g0102361 Lupinus albus HOM05D002704 ORTHO05D002891 6.3e-11 71.6 121 39.7
AL2G38480 Arabidopsis lyrata HOM05D002704 ORTHO05D002891 8.2e-11 71.2 122 40.2
Sp5g33290 Schrenkiella parvula HOM05D002704 ORTHO05D002891 8.2e-11 71.2 123 40.7
AT1G22250 Arabidopsis thaliana HOM05D002704 ORTHO05D002891 1.1e-10 70.9 109 38.5
A07p27670 Brassica napus HOM05D002704 ORTHO05D002891 1.1e-10 70.9 107 42.1
Lalb_Chr04g0253151 Lupinus albus HOM05D002704 ORTHO05D002891 1.1e-10 70.9 120 39.2
MD08G1182400 Malus domestica HOM05D002704 ORTHO05D002891 1.1e-10 70.9 137 35.8
Sp1g19760 Schrenkiella parvula HOM05D002704 ORTHO05D002891 1.1e-10 70.9 102 40.2
BcaB05g25124 Brassica carinata HOM05D002704 ORTHO05D002891 1.4e-10 70.5 131 38.9
MD15G1368100 Malus domestica HOM05D002704 ORTHO05D002891 1.4e-10 70.5 131 36.6
PSO781G0307 Papaver somniferum HOM05D002704 ORTHO05D002891 1.4e-10 70.5 103 39.8
Phvul.008G173300 Phaseolus vulgaris HOM05D002704 ORTHO05D002891 1.4e-10 70.5 136 33.1
TPR.G32999 Trifolium pratense HOM05D002704 ORTHO05D002891 1.4e-10 70.5 125 36.0
CDE10G0971 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 1.8e-10 70.1 136 36.8
Aa31LG4G8210 Aethionema arabicum HOM05D002704 ORTHO05D002891 2.4e-10 69.7 89 44.9
BolC5t30835H Brassica oleracea HOM05D002704 ORTHO05D002891 2.4e-10 69.7 107 40.2
Carub.0002s2506 Capsella rubella HOM05D002704 ORTHO05D002891 2.4e-10 69.7 102 44.1
Sed0023198 Sechium edule HOM05D002704 ORTHO05D002891 2.4e-10 69.7 170 31.8
Carub.0001s2180 Capsella rubella HOM05D002704 ORTHO05D002891 3.1e-10 69.3 88 42.0
Sed0020547 Sechium edule HOM05D002704 ORTHO05D002891 3.1e-10 69.3 124 37.9
CARHR071630 Cardamine hirsuta HOM05D002704 ORTHO05D002891 4.1e-10 68.9 206 32.0
Sed0024849 Sechium edule HOM05D002704 ORTHO05D002891 4.1e-10 68.9 120 36.7
VMungo0647G0311 Vigna mungo HOM05D002704 ORTHO05D002891 4.1e-10 68.9 105 38.1
Ah.05g170030 Amaranthus hybridus HOM05D002704 ORTHO05D002891 5.3e-10 68.6 129 31.0
BcaC05g26153 Brassica carinata HOM05D002704 ORTHO05D002891 5.3e-10 68.6 96 41.7
A07p14590 Brassica napus HOM05D002704 ORTHO05D002891 5.3e-10 68.6 102 40.2
C05p21380 Brassica napus HOM05D002704 ORTHO05D002891 5.3e-10 68.6 96 41.7
Thhalv10019097m.g Eutrema salsugineum HOM05D002704 ORTHO05D002891 5.3e-10 68.6 140 36.4
EL10Ac1g01225 Beta vulgaris HOM05D002704 ORTHO05D002891 6.9e-10 68.2 236 30.5
A09p42520 Brassica napus HOM05D002704 ORTHO05D002891 6.9e-10 68.2 109 35.8
BraA09t39728Z Brassica rapa HOM05D002704 ORTHO05D002891 6.9e-10 68.2 109 35.8
CDE10G0994 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 6.9e-10 68.2 134 35.8
BraA07t29205Z Brassica rapa HOM05D002704 ORTHO05D002891 1.2e-09 67.4 102 40.2
Thhalv10008815m.g Eutrema salsugineum HOM05D002704 ORTHO05D002891 1.5e-09 67.0 100 40.0
PSO541G2691 Papaver somniferum HOM05D002704 ORTHO05D002891 1.5e-09 67.0 139 34.5
BcaC06g34946 Brassica carinata HOM05D002704 ORTHO05D002891 2.0e-09 66.6 102 39.2
C07p21480 Brassica napus HOM05D002704 ORTHO05D002891 2.0e-09 66.6 102 39.2
BolC7t42674H Brassica oleracea HOM05D002704 ORTHO05D002891 2.0e-09 66.6 102 39.2
Haze_22261 Corylus avellana HOM05D002704 ORTHO05D002891 2.6e-09 66.2 149 34.9
arahy.Tifrunner.gnm1.ann1.AF75R2 Arachis hypogaea HOM05D002704 ORTHO05D002891 3.4e-09 65.9 158 31.6
CARHR022620 Cardamine hirsuta HOM05D002704 ORTHO05D002891 3.4e-09 65.9 95 41.1
A01p24680 Brassica napus HOM05D002704 ORTHO05D002891 5.9e-09 65.1 98 39.8
BraA01t02380Z Brassica rapa HOM05D002704 ORTHO05D002891 5.9e-09 65.1 98 39.8
CANSAT25G0913 Cannabis sativa HOM05D002704 ORTHO05D002891 5.9e-09 65.1 57 50.9
ATR0782G003 Amborella trichopoda HOM05D002704 ORTHO05D002891 7.7e-09 64.7 149 31.5
BraA02t07210Z Brassica rapa HOM05D002704 ORTHO05D002891 7.7e-09 64.7 120 37.5
BcaC08g45431 Brassica carinata HOM05D002704 ORTHO05D002891 1.0e-08 64.3 79 44.3
A07p43470 Brassica napus HOM05D002704 ORTHO05D002891 1.0e-08 64.3 71 50.7
C06p30640 Brassica napus HOM05D002704 ORTHO05D002891 1.0e-08 64.3 79 44.3
BolC6t38228H Brassica oleracea HOM05D002704 ORTHO05D002891 1.0e-08 64.3 79 44.3
BraA07t31860Z Brassica rapa HOM05D002704 ORTHO05D002891 1.0e-08 64.3 71 50.7
Lalb_Chr11g0065441 Lupinus albus HOM05D002704 ORTHO05D002891 1.0e-08 64.3 49 55.1
Lalb_Chr23g0270591 Lupinus albus HOM05D002704 ORTHO05D002891 1.0e-08 64.3 75 45.3
Psat2g072240 Pisum sativum HOM05D002704 ORTHO05D002891 1.0e-08 64.3 108 36.1
MELO3C011023.2 Cucumis melo HOM05D002704 ORTHO05D002891 1.3e-08 63.9 147 30.6
CsaV3_2G029650 Cucumis sativus L. HOM05D002704 ORTHO05D002891 2.9e-08 62.8 143 30.8
Zm00001eb401340 Zea mays HOM05D002704 ORTHO05D002891 2.9e-08 62.8 154 28.6
AL1G35710 Arabidopsis lyrata HOM05D002704 ORTHO05D002891 5.0e-08 62.0 98 36.7
HPP92_011170 Vanilla planifolia HOM05D002704 ORTHO05D002891 6.5e-08 61.6 164 31.7
Zm00001eb006930 Zea mays HOM05D002704 ORTHO05D002891 8.5e-08 61.2 173 29.5
HPP92_019307 Vanilla planifolia HOM05D002704 ORTHO05D002891 2.5e-07 59.7 138 29.7
ClCG08G011070 Citrullus lanatus HOM05D002704 ORTHO05D002891 3.2e-07 59.3 169 32.0
ECA232G3648 Erigeron canadensis HOM05D002704 ORTHO05D000131 3.2e-07 59.3 119 37.8
PSO357G0625 Papaver somniferum HOM05D002704 ORTHO05D002891 3.2e-07 59.3 113 34.5
Medtr5g063720 Medicago truncatula HOM05D002704 ORTHO05D002891 4.2e-07 58.9 35 62.9
Aqoxy2G04081 Aquilegia oxysepala HOM05D002704 ORTHO05D002891 5.5e-07 58.5 123 33.3
Aqoxy6G02333 Aquilegia oxysepala HOM05D002704 ORTHO05D002891 5.5e-07 58.5 123 33.3
A02p22080 Brassica napus HOM05D002704 ORTHO05D002891 5.5e-07 58.5 104 36.5
CARHR259930 Cardamine hirsuta HOM05D002704 ORTHO05D002891 7.2e-07 58.2 182 30.2
Os03g0191200 Oryza sativa ssp. japonica HOM05D002704 ORTHO05D002891 1.2e-06 57.4 143 30.8
Sabra05G0124600 Salix brachista HOM05D002704 ORTHO05D002891 2.1e-06 56.6 153 36.6
AT4G08910 Arabidopsis thaliana HOM05D002704 ORTHO05D002891 3.6e-06 55.8 127 34.6
THA.LOC104816761 Tarenaya hassleriana HOM05D002704 ORTHO05D002891 4.7e-06 55.5 68 39.7
Carub.0006s2748 Capsella rubella HOM05D002704 ORTHO05D002891 7.9e-06 54.7 174 30.5
CDE12G0481 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 7.9e-06 54.7 112 37.5


User provided reference genes

Program Settings