Gene: AT1G78170
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G78170
- Transcript Identifier AT1G78170.1
- Gene Type Coding gene
- Location Chr1 : 29414160-29414941 : positive
Gene Family Information
- ID HOM05D002704
- #Genes/#Species 254/89
- Phylogenetic origin
- ID ORTHO05D002891
- #Genes/#Species 256/88
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G78170.1
- uniprot Q84JP5
Descriptions
- Description E3 ubiquitin-protein ligase
- Computational description unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22250.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008150 | ND | Gene Ontology | biological_process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016874 | IEA | GOA Database | ligase activity | |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D002704 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |